| Commit message (Collapse) | Author | Age | Files | Lines | |
|---|---|---|---|---|---|
| * | sci-biology/ncbi-tools++-12.0.0: do not force --without-downloaded-vdb |   Martin Mokrejš | 2017-03-15 | 1 | -2/+3 |
| | | | | | | | This configure flag appeared only in more recent versions. Package-Manager: Portage-2.3.3, Repoman-2.3.1 | ||||
| * | sci-biology/gbench and sci-biology/ncbi-tools++: do not download ncbi-vdb | Martin Mokrejš | 2017-02-26 | 1 | -0/+5 |
| | | | | | | | Do not download sources from github during configure phase. This disables the feature completely. Somehow it does not find vdb binaries provided by our sci-biology/ncbi-tools++ package? | ||||
| * | Drop leftover from CVS in HEADER |   Justin Lecher | 2017-02-25 | 1 | -1/+0 |
| | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | Drop all trailing whitespaces | Justin Lecher | 2017-02-05 | 1 | -6/+6 |
| | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sci-biology/ncbi-tools++: add a comment about >=gcc-5.3.0 incompatibility | Martin Mokrejš | 2016-12-03 | 1 | -0/+3 |
| | | | | | Package-Manager: portage-2.3.2 | ||||
| * | sci-biology/ncbi-tools++: fix bug #579248#c by disabling more tests | Martin Mokrejš | 2016-12-03 | 1 | -0/+1 |
| | | | | | | | | | | | | | | | | | | | | | | | | | This will likely also fix the #579248 bug in rmblast (untested). Our $FILESDIR/disable-testsuite-compilation.txt only excludes test applications from usingboost, not the support library. Hence the above bug. We could either add --without-boost to the configuration command line to disable the bosost-related code in support library or, which is the path we take in this commit, we disable building of the yet escaping unit_tests which needed boost. Upstream further said: The C++ Toolkit makes very little use of Boost outside of unit tests, but that's a fair question. The simplest fix preserving other uses of Boost would be to edit .../src/corelib/Makefile.in and remove test_boost from LIB_PROJ. (You'll still also need to exclude building the tests by adding '-.*/unit_tests' to the $FILESDIR/disable-testsuite-compilation.txt file.) Package-Manager: portage-2.3.2 | ||||
| * | sci-biology/ncbi-tools++: Fix SLOT operators | Justin Lecher | 2016-08-23 | 1 | -1/+1 |
| | | | | | | Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sci-biology/ncbi-tools++: Drop obsolete dep | Justin Lecher | 2016-08-23 | 1 | -1/+0 |
| | | | | | | Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sci-biology/ncbi-tools++: Drop sqlite-2 support | Justin Lecher | 2016-01-06 | 1 | -4/+3 |
| | | | | | | Package-Manager: portage-2.2.26 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | Convert all $Header$ to $Id$ tags as it has be done in gentoo.git | Justin Lecher | 2015-08-17 | 1 | -1/+1 |
| | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | added dep needed at build-time |   Horea Christian | 2015-06-23 | 1 | -0/+1 |
| | | | | | Package-Manager: portage-2.2.20 | ||||
| * | sci-biology/ncbi-tools++: added upstream patch to compile against ↵ | Martin Mokrejš | 2015-06-11 | 1 | -0/+1 |
| | | | | | | | sys-libs/db-6.0.30 Package-Manager: portage-2.2.18 | ||||
| * | sci-biology/ncbi-tools++: re-added KEYWORDS | Martin Mokrejš | 2015-04-17 | 1 | -1/+2 |
| | | | | | Package-Manager: portage-2.2.18 | ||||
| * | sci-biology/ncbi-tools++: fix SLOT operators; correct python deps | Justin Lecher | 2015-02-18 | 1 | -7/+11 |
| | | | | | Package-Manager: portage-2.2.17 | ||||
| * | ncbi-tools++: fix prefix libdir, muparser/hdf5 use flags |   mschubert | 2014-10-09 | 1 | -3/+3 |
| | | |||||
| * | major clean, drop old version and unused patches |   Christoph Junghans | 2014-09-15 | 1 | -2/+1 |
| | | | | | Package-Manager: portage-2.2.8-r1 | ||||
| * | sci-biology/ncbi-tools++-12.0.0: improved comment text | Martin Mokrejš | 2014-06-26 | 1 | -1/+4 |
| | | |||||
| * | sci-biology/ncbi-tools++: so require media-libs/mesa[osmesa] for USE=mesa | Martin Mokrejš | 2014-06-26 | 1 | -1/+1 |
| | | |||||
| * | sci-biology/ncbi-tools++: bring back USE=mesa although it is about OSMesa | Martin Mokrejš | 2014-06-26 | 1 | -5/+3 |
| | | |||||
| * | sci-biology/ncbi-tools++: fix 'make install if USE=pch | Martin Mokrejš | 2014-06-26 | 1 | -0/+1 |
| | | |||||
| * | sci-biology/ncbi-tools++: dropped USE=ftds as it is useless and recommended ↵ | Martin Mokrejš | 2014-06-26 | 1 | -8/+6 |
| | | | | | by upstream to be disabled altogether | ||||
| * | sci-biology/ncbi-tools++-12.0.0: drop forgotten IUSE=ssl | Martin Mokrejš | 2014-06-26 | 1 | -1/+1 |
| | | |||||
| * | sci-biology/ncbi-tools++-12.0.0: added a blocker with sci-biology/sra_sdk | Martin Mokrejš | 2014-06-26 | 1 | -0/+1 |
| | | |||||
| * | sci-biology/ncbi-tools++-12.0.0: dropping :%=% from LIB settings | Martin Mokrejš | 2014-06-26 | 1 | -0/+1 |
| | | |||||
| * | sci-biology/ncbi-tools++-12.0.0: dropped altogether openssl-related USE ↵ | Martin Mokrejš | 2014-06-26 | 1 | -3/+1 |
| | | | | | flags and configure arguments (per upstream info nothing in the public code uses openssl and the configure test is there for their internal reasonings); dropped gnutls[lzo] requirement which was only need for unpatched 9.0.0 version; however, --with-lzo is still advantageous for http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/group__Compression.htmlhttp://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/group__CompressionStreams.html | ||||
| * | sci-biology/ncbi-tools++-12.0.0: cleanup comments and shutdown a false alarm ↵ | Martin Mokrejš | 2014-06-26 | 1 | -2/+1 |
| | | | | | message from mv | ||||
| * | sci-biology/ncbi-tools++-12.0.0: dropped unneeded patches, added direct ↵ | Martin Mokrejš | 2014-06-26 | 1 | -5/+2 |
| | | | | | dependency on glew because the dependency on virtual/opengl does not work | ||||
| * | sci-biology/ncbi-tools++-12.0.0: re-added update patch to configure so that ↵ | Martin Mokrejš | 2014-06-25 | 1 | -2/+2 |
| | | | | | we can avoid eautoconf until there is autoconf-2.59 system-wide | ||||
| * | sci-biology/ncbi-tools++-12.0.0: install colliding files under a name ↵ | Martin Mokrejš | 2014-06-25 | 1 | -2/+6 |
| | | | | | suffixed by a plus sign | ||||
| * | sci-biology/ncbi-tools++-12.0.0: first compile-able ebuild, wow, huge thanks ↵ | Martin Mokrejš | 2014-06-25 | 1 | -5/+9 |
| | | | | | to Aaron Ucko from NCBI developers on the cpp@ mailing list | ||||
| * | more changes to get ncbi-tools++-12.0.0 compiled | Martin Mokrejš | 2014-06-25 | 1 | -10/+36 |
| | | |||||
| * | add an extra patch for configure until we find a way to ensure user has ↵ | Martin Mokrejš | 2014-06-23 | 1 | -6/+10 |
| | | | | | autoconf-2.59 or for ncbi-tools++-12.0.0 may have autoconf-2.60 | ||||
| * | add patches for 12.0.0 to support autoconf-2.60 (so far 2.59 was needed) | Martin Mokrejš | 2014-06-23 | 1 | -3/+7 |
| | | |||||
| * | sci-biology/ncbi-tools++: added a note about a taxonomy database add-on not ↵ | Martin Mokrejš | 2014-06-02 | 1 | -0/+3 |
| | | | | | yet installed by Gentoo | ||||
| * | Configure works | Justin Lecher | 2014-05-06 | 1 | -8/+8 |
| | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sci-biology/ncbi-tools++: add deps on jpeg-turbo | Martin Mokrejš | 2014-03-25 | 1 | -1/+1 |
| | | |||||
| * | Sanitize ebuild header | Justin Lecher | 2014-01-30 | 1 | -2/+2 |
| | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | Start to work on it again | Justin Lecher | 2014-01-25 | 1 | -7/+7 |
| | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | Fix URL to point to a public SVN repository | Martin Mokrejš | 2013-09-14 | 1 | -2/+3 |
| | | |||||
| * | more 12.0.0 cleanup, still not working | Martin Mokrejš | 2013-09-14 | 1 | -0/+3 |
| | | |||||
| * | fix version number in the ebuild | Martin Mokrejš | 2013-09-13 | 1 | -1/+1 |
| | | |||||
| * | No, the fix-creaders-linking is needed for 12.0.0 as well. | Martin Mokrejš | 2013-09-13 | 1 | -0/+1 |
| | | |||||
| * | Latest release which needs so far only the two Gentoo patches. Would be ↵ | Martin Mokrejš | 2013-09-13 | 1 | -0/+306 |
| better to drop from their filename to avoid their duplication I think. | |||||
GitWeb