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* metadata.xml: Set typeJustin Lecher2016-01-251-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* metadata.xml: convert hard -> projJustin Lecher2016-01-251-1/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop ChangeLogs in favour of commit messagesJustin Lecher2016-01-071-89/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Add missing remote-idsJustin Lecher2015-09-221-0/+3
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/tophat: Drop unnecessary depsJustin Lecher2015-09-074-9/+0
| | | | | | | On behalf of Martin Mokrejs Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Convert all $Header$ to $Id$ tags as it has be done in gentoo.gitJustin Lecher2015-08-175-5/+5
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/tophat: tophat-2.1.0 version bumplayman2015-08-143-0/+49
| | | | Package-Manager: portage-2.2.20-prefix
* Revert "Gentoo does https by default now"Justin Lecher2015-06-211-1/+1
| | | | This reverts commit 98718494343af4990facdefb0033471686e975a6.
* Gentoo does https by default nowJustin Lecher2015-06-211-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* added PYTHON_USEDEPMartin Mokrejš2015-05-024-6/+10
| | | | Package-Manager: portage-2.2.18
* sci-biology/tophat: recorded depependencies; dropped KEYWORDS until we have ↵Martin Mokrejš2015-04-284-11/+46
| | | | | | slotted samtools (or multiple static binaries with version appended to filename), link tophat_reporter against -lsam-0.1.18 and similarly adjust tophat_reporter Package-Manager: portage-2.2.18
* sci-biology/tophat: try to introduce all-recursive target to make upstream ↵Martin Mokrejš2015-04-282-2/+8
| | | | | | 'make all' call happy Package-Manager: portage-2.2.18
* sci-biology/tophat: version bumps; we can use the bundled SeqAn-1.3 and also ↵Martin Mokrejš2015-04-277-0/+346
| | | | | | the samtools-0.1.18, it is just for compilation AFAIK; note also the specific version of bowtie (I infer <= versions are supported only) Package-Manager: portage-2.2.18
* To main treeAndrey Kislyuk2009-12-074-52/+0
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* New package, thanks to Philippe Veber for the ebuildroot2009-09-161-0/+0
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* New package, thanks to Philippe Veber for the ebuildAndrey Kislyuk2009-09-164-0/+52