| Commit message (Expand) | Author | Age | Files | Lines |
* | sci-biology/ncbi-tools++: add a comment about >=gcc-5.3.0 incompatibility | Martin Mokrejš | 2016-12-03 | 1 | -0/+3 |
* | sci-biology/ncbi-tools++: fix bug #579248#c by disabling more tests | Martin Mokrejš | 2016-12-03 | 3 | -0/+13 |
* | sci-biology/ensembl-tools: add missing dependency | Martin Mokrejš | 2016-12-02 | 1 | -3/+2 |
* | sci-biology/freebayes: note the many bundled deps we need to unbundle | Martin Mokrejš | 2016-12-02 | 1 | -0/+64 |
* | sci-biology/ensembl-tools: note dependency not yet in science overlay | Martin Mokrejš | 2016-12-02 | 2 | -3/+5 |
* | sci-biology/stacks: add missing dependency | Martin Mokrejš | 2016-12-02 | 1 | -1/+2 |
* | sci-biology/augustus: zap -O3 CFLAG from src/Makefile | Martin Mokrejš | 2016-12-01 | 1 | -1/+2 |
* | sci-biology/gmap: version bump; drop unused USE flags from metadata.xml | Martin Mokrejš | 2016-12-01 | 3 | -0/+32 |
* | sci-biology/stacks: version bump; drop bundled htslib sources, bug #601366 | Martin Mokrejš | 2016-12-01 | 2 | -6/+14 |
* | sci-biology/trinityrnaseq: do not install fasta_tool which belongs to sci-bio... | Martin Mokrejš | 2016-12-01 | 3 | -3/+3 |
* | sci-biology/twinscan: add missing space breaking GLIB_CFLAGS | Martin Mokrejš | 2016-12-01 | 1 | -1/+1 |
* | sci-biology/kat: version bump, blocked by upstream issue #61 | Martin Mokrejš | 2016-11-30 | 2 | -3/+9 |
* | sci-biology/Jannovar-bin: replaced by sci-biology/jannovar, deleting | Martin Mokrejš | 2016-11-15 | 3 | -45/+0 |
* | sci-biology/jannovar: working ebuild, although maven re-fetches 95MB of its deps | Martin Mokrejš | 2016-11-15 | 1 | -8/+35 |
* | sci-biology/VarScan: install upstream jar with *.java and *.class files | Martin Mokrejš | 2016-11-15 | 2 | -5/+11 |
* | Revert "sci-biology/VarScan: remove a package skeleton, no sources available" | Martin Mokrejš | 2016-11-15 | 3 | -0/+42 |
* | sci-biology/VarScan-bin: use upstream binaries | Martin Mokrejš | 2016-11-15 | 3 | -0/+44 |
* | sci-biology/VarScan: remove a package skeleton, no sources available | Martin Mokrejš | 2016-11-15 | 3 | -42/+0 |
* | sci-biology/psychopy: Fix python dependency in media-libs/opencv | Justin Lecher | 2016-11-12 | 6 | -96/+3 |
* | sci-biology/igv: bump hardcoded version of needed JAR dependency | Martin Mokrejš | 2016-11-11 | 1 | -1/+1 |
* | sci-biology/MeV: record java deps properly | Martin Mokrejš | 2016-11-09 | 1 | -3/+8 |
* | sci-biology/igv: fix DEPS so that ebuild+repoman are happy (but emerge compla... | Martin Mokrejš | 2016-11-08 | 3 | -9/+98 |
* | sci-biology/igv: change 'dev-java/guava:17' to 'dev-java/guava:*' | Martin Mokrejš | 2016-11-08 | 2 | -3/+3 |
* | Correct permissions and drop hidden files | Justin Lecher | 2016-10-29 | 2 | -0/+0 |
* | Follow up cleaning of obsolete python implementations | Justin Lecher | 2016-10-28 | 1 | -1/+1 |
* | Bulk fix of obsolete python versions | Justin Lecher | 2016-10-28 | 1 | -4/+6 |
* | sci-biology/kat: fix SRC_URI | Martin Mokrejš | 2016-10-17 | 2 | -9/+2 |
* | sci-biology/kat: new package | Martin Mokrejš | 2016-10-17 | 4 | -0/+71 |
* | sci-biology/mothur: shutdown QC error about IUSE=boost missing | Martin Mokrejš | 2016-10-15 | 1 | -1/+2 |
* | Merge remote-tracking branch 'github/master' | Marius Brehler | 2016-10-12 | 32 | -412/+331 |
|\ |
|
| * | sci-biology/hmmer: Remove, latest version in main tree | David Seifert | 2016-10-09 | 5 | -159/+0 |
| * | sci-biology/consed: Remove, latest version in main tree | David Seifert | 2016-10-03 | 3 | -107/+0 |
| * | sci-biology/nilearn: fixed gtk testing error (#690) | Horea Christian | 2016-10-02 | 5 | -5/+10 |
| * | sci-biology/nilearn: updted EAPI and python compatibility (#684) | Horea Christian | 2016-09-26 | 6 | -16/+50 |
| * | sci-biology/psychopy: version bump (#685) | Horea Christian | 2016-09-26 | 2 | -0/+51 |
| * | sci-biology/nistats: added new dep, updated EAPI and python cmpatibility (#683) | Horea Christian | 2016-09-26 | 1 | -6/+10 |
| * | sci-biology/vcftools: remove, in main tree | David Seifert | 2016-09-25 | 3 | -67/+0 |
| * | sci-biology/biopython: remove, in main tree | David Seifert | 2016-09-25 | 4 | -156/+0 |
| * | sci-biology/bedtools: remove, in main tree | David Seifert | 2016-09-25 | 3 | -57/+0 |
| * | sci-biology/abyss: tweak for gcc-6, bug #594254 (#681) | Sergei Trofimovich | 2016-09-23 | 2 | -0/+35 |
| * | sci-biology/nireg:new ebuild (#680) | Horea Christian | 2016-09-23 | 2 | -0/+48 |
| * | sci-biology/nitime: new ebuild (#679) | Horea Christian | 2016-09-23 | 4 | -0/+97 |
| * | Pybrain (#677) | Horea Christian | 2016-09-23 | 3 | -8/+35 |
* | | sci-biology/consed: this version now landed main tree, removing | Martin Mokrejš | 2016-10-04 | 3 | -107/+0 |
* | | sci-biology/bedtools: rewritten ebuild landed now in main tree (bug #594994) | Martin Mokrejš | 2016-10-03 | 3 | -57/+0 |
* | | sci-biology/biopieces: re-add just landed sci-biology/idba to DEPENDencies, g... | Martin Mokrejš | 2016-09-24 | 2 | -4/+4 |
* | | sci-biology/idba: new package, needed by biopieces, github issue #381 | Martin Mokrejš | 2016-09-24 | 4 | -0/+81 |
* | | sci-biology/bedtools: update HOMEPAGE | Martin Mokrejš | 2016-09-24 | 1 | -1/+1 |
* | | sci-biology/staden_doc: add new version | Martin Mokrejš | 2016-09-23 | 2 | -0/+45 |
* | | sci-biology/mothur: remove comment | Martin Mokrejš | 2016-09-23 | 1 | -1/+0 |