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* sci-biology/merlin: Drop unnecessary diesMarius Brehler2015-01-101-3/+3
* sci-biology/merlin: Move to EAPI=5Marius Brehler2015-01-102-3/+7
* Merge pull request #313 from marbre/InterMineJustin2015-01-102-4/+8
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| * Fix InterMine ebuil: Replace InterMine license by LGPL-2.1+Marius Brehler2015-01-102-1/+5
| * Fix InterMine QA issuesMarius Brehler2015-01-101-4/+4
* | sci-biology/trans-abyss: Soma polishingJustin Lecher2015-01-102-1/+4
* | Merge remote-tracking branch 'github/master'Justin Lecher2015-01-101-2/+3
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| * | sci-biology/trans-abys: Fix license and keywordsMarius Brehler2015-01-101-2/+3
* | | sci-biology/primerD: Fix licenseJustin Lecher2015-01-102-4/+4
* | | sci-biology/pb-jelly: Fix license; add missing []Justin Lecher2015-01-102-3/+7
* | | sci-biology/pb-honey: Fix license; add missing []Justin Lecher2015-01-102-6/+14
* | | sci-biology/jigsaw: Fix licenseJustin Lecher2015-01-102-5/+5
* | | sci-biology/ePCR: Fix licenseJustin Lecher2015-01-102-7/+14
* | | sci-biology/pvmsx: Soma QA and polishingJustin Lecher2015-01-103-24/+29
* | | sci-biology/ESTate: Soma QA and polishingJustin Lecher2015-01-102-9/+22
* | | sci-biology/SEECER: Fix licenseJustin Lecher2015-01-102-4/+8
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* | sci-biology/cegma: Fix license;drop keywords due to missing keyowrds of depsJustin Lecher2015-01-102-4/+8
* | sci-biology/MochiView: Fix licenseJustin Lecher2015-01-102-1/+4
* | sci-biology/ICC: Fix licenseJustin Lecher2015-01-102-4/+7
* | sci-biology/CAutils: Fix licenseJustin Lecher2015-01-102-4/+11
* | sci-biology/Atlas_GapFill: Fix licenseJustin Lecher2015-01-102-5/+13
* | sci-biology/Atlas: Fix licenseJustin Lecher2015-01-102-1/+4
* | sci-biology/est2assembly: Bump EAPI; drop KEYWORDS from live ebuild; fix depsJustin Lecher2015-01-103-24/+33
* | sci-biology/blue: Fix licenseJustin Lecher2015-01-102-2/+6
* | sci-biology/BRANCH: Move from git-2 to git-r3 eclass; add HOMEPAGE; be verbos...Justin Lecher2015-01-102-7/+12
* | sci-biology/velvetk: Simplify ebuildJustin Lecher2015-01-102-5/+4
* | sci-biology/zmsort: Bump EAPIJustin Lecher2015-01-103-8/+12
* | sci-biology/tigr-closure: Some QA, add licenseJustin Lecher2015-01-102-25/+25
* | new package; install *.pm into PERL5LIB/cegma and pass that via env.dMartin Mokrejš2015-01-104-0/+54
* | install *.pm into PERL5LIB/TransDecoder and pass that via env.dMartin Mokrejš2015-01-102-2/+8
* | improve description and emphasize the ORF finder can overcome frameshifts in CDSMartin Mokrejš2015-01-092-1/+5
* | use 'insinto' and not 'doins'Martin Mokrejš2015-01-092-1/+4
* | add the probability matricesMartin Mokrejš2015-01-092-0/+5
* | add the PhD thesis itself as documentationMartin Mokrejš2015-01-093-1/+7
* | sci-biology/ESTate: new packageMartin Mokrejš2015-01-094-0/+51
* | sci-biology/transdecoder: added patches so that we use PATH to loclate binari...Martin Mokrejš2015-01-094-2/+171
* | sci-biology/tablet: note the compilation from source is not coded into ebuild...Martin Mokrejš2015-01-092-2/+8
* | sci-biology/wcd: version bump, clarify package description, add comments abou...Martin Mokrejš2015-01-093-6/+18
* | sci-biology/ICC: actually ignore the bundled Parallel module and install it f...Martin Mokrejš2015-01-081-7/+1
* | sci-biology/RADtools: manually install perl modules int PERL5INC pathMartin Mokrejš2015-01-083-7/+17
* | sci-biology/parafly: new packageMartin Mokrejš2015-01-084-0/+42
* | sci-biology/ffindex: new package, maybe fits better under some other herd?Martin Mokrejš2015-01-084-0/+62
* | sci-biology/transdecoder: new packageMartin Mokrejš2015-01-084-0/+63
* | sci-biology/artemis-bin: version bumpMartin Mokrejš2015-01-083-3/+9
* | sci-biology/EBARDenovo: added a note about non-commercial use requirement men...Martin Mokrejš2015-01-082-0/+6
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* sci-biology/EBARDenovo: new packageMartin Mokrejš2015-01-084-0/+43
* sci-biology/nesoni: version bumpMartin Mokrejš2015-01-083-4/+10
* sci-biology/vague-bin: new java binary packageMartin Mokrejš2015-01-085-0/+68
* Initial ebuildMartin Mokrejš2015-01-074-0/+44
* new, working ebuildMartin Mokrejš2015-01-074-0/+39