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* sci-biology/stringtie: shorten DESCRIPTION lineMartin Mokrejš2016-04-241-1/+1
* sci-biology/stringtie: new packageMartin Mokrejš2016-04-243-0/+41
* sci-biology/smalt: document unclear instakll steps, fix DESCRIPTIONMartin Mokrejš2016-04-241-1/+9
* sci-biology/RSeQC: fix Gentoo copyright header, EAPI=6Martin Mokrejš2016-04-241-3/+2
* sci-biology/RSeQC: do not require the only tested pysam versionMartin Mokrejš2016-04-241-1/+1
* sci-biology/MolBioLib: improved ebuild based on response from authorMartin Mokrejš2016-04-241-3/+11
* LICENSE unknownJustin Lecher2016-04-244-102/+0
* sci-biology/picard: brought ebuild for 2.2.2 to a somewhat workable state. Dr...Johann Schmitz2016-04-242-34/+129
* sci-biology/prinseq-lite: add more DEPENDenciesMartin Mokrejš2016-04-231-4/+4
* sci-biology/picard: preparing last java7-compatible version and one for java8Martin Mokrejš2016-04-224-0/+164
* sci-biology/hts-python: new package providing an alternative to pysamMartin Mokrejš2016-04-202-0/+34
* sci-biology/tablet-bin: version bump; added coveragestats.py (requires dos2unix)Martin Mokrejš2016-04-202-2/+6
* Merge remote-tracking branch 'github/master'Marius Brehler2016-04-1325-783/+1
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| * sci-biology/pysam: Remove old, latest 0.9.0 in main treeDavid Seifert2016-04-104-85/+0
| * sci-biology/tophat: remove all ebuilds, latest version in main treeDavid Seifert2016-04-097-348/+0
| * cluster to fsl_cluster renameHorea Christian2016-04-041-1/+1
| * sci-biology/abyss: moved to main treeDavid Seifert2016-04-0313-367/+0
| * sci-biology/abyss: fix automagic haskell deps, bug #534412Sergei Trofimovich2016-04-032-4/+22
* | sci-biology/repeatmasker: add DEPENDency on dev-perl/Text-Soundex as it now l...Martin Mokrejš2016-04-121-3/+3
* | sci-biology/trinityrnaseq: use 'rm -rf' when deleting a subdirectory with bun...Martin Mokrejš2016-04-113-3/+3
* | sci-biology/trinityrnaseq: adjust to sci-biology/samtools using SLOTs now;Martin Mokrejš2016-04-114-2/+79
* | sci-biology/pysamstats: new packageMartin Mokrejš2016-04-113-0/+36
* | sci-biology/AlignGraph: improve package DESCRMartin Mokrejš2016-04-111-1/+1
* | sci-biology/megahit: new packageMartin Mokrejš2016-04-102-0/+46
* | sci-biology/oases: new packageMartin Mokrejš2016-04-105-0/+102
* | sci-biology/reaper: new packageMartin Mokrejš2016-04-103-0/+47
* | sci-biology/snpomatic: new packageMartin Mokrejš2016-04-102-0/+46
* | sci-biology/somatic-sniper: new packageMartin Mokrejš2016-04-103-0/+42
* | sci-biology/gemini: new packageMartin Mokrejš2016-04-102-0/+41
* | sci-biology/bfast: new packageMartin Mokrejš2016-04-103-0/+33
* | sci-biology/smalt: new packageMartin Mokrejš2016-04-101-2/+2
* | sci-biology/iCORN2: new package with bundled gatk and picard jar filesMartin Mokrejš2016-04-103-0/+71
* | sci-biology/Scaffolder-evaluation: new packageMartin Mokrejš2016-04-102-0/+46
* | sci-biology/Fastaq: new packageMartin Mokrejš2016-04-102-0/+33
* | sci-biology/assembly-stats: new packageMartin Mokrejš2016-04-102-0/+34
* | sci-biology/bamtools: try to document roughly what jsoncpp version is likely ...Martin Mokrejš2016-04-101-0/+1
* | sci-biology/sga: compilation against bamtools does not work, see linkMartin Mokrejš2016-04-101-0/+1
* | sci-biology/sga: move optional runtime deps to RDEPENDMartin Mokrejš2016-04-101-2/+2
* | sci-biology/SPAdes: improve descriptionMartin Mokrejš2016-04-081-1/+1
* | sci-biology/edena: improve package descriptionMartin Mokrejš2016-04-081-1/+1
* | sci-biology/sga: improve package descriptionMartin Mokrejš2016-04-081-2/+2
* | sci-biology/cap3-bin: drop KEYWORDSMartin Mokrejš2016-04-082-2/+2
* | sci-biology/cap3-bin: drop wrong LICENSEMartin Mokrejš2016-04-082-2/+2
* | sci-biology/arachne: improve package descriptionMartin Mokrejš2016-04-081-1/+1
* | sci-biology/arachne: improve package descriptionMartin Mokrejš2016-04-081-1/+1
* | sci-biology/SSAKE: improve package descriptionMartin Mokrejš2016-04-081-1/+1
* | sci-biology/wgs-assembler: improve package descriptionMartin Mokrejš2016-04-081-2/+2
* | sci-biology/sailfish: version bump; noted bundled 3rd-party codeMartin Mokrejš2016-04-083-3/+13
* | sci-biology/prinseq-lite: new package, needs more perl modulesMartin Mokrejš2016-04-033-0/+49
* | sci-biology/MolBioLib: does not build, contacted upstreamMartin Mokrejš2016-04-021-1/+1
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