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* sci-biology/sra_sdk-2.1.9: version bump and almost correct DESTDIR patchMartin Mokrejs2012-02-065-9/+172
* sci-biology/seaview: and the path to the helpfile was corrected in the Makefi...Martin Mokrejs2012-01-301-0/+4
* sci-biology/seaview: version bump; add missing symlink so that the C++ header...Martin Mokrejs2012-01-304-0/+99
* sci-biology/wgs-assembler-7.0: version bump, would be nice if we could stop c...Martin Mokrejs2012-01-274-0/+92
* version bump and some fixes so that it works with webappconfig again?Martin Mokrejs2012-01-174-0/+238
* sci-biology/lastz: A pairwise DNA sequence aligner (also chromosome to chromo...Martin Mokrejs2012-01-174-0/+48
* sci-biology/YASRA: Yet Another Short Read Assembler to reference using LASTZMartin Mokrejs2012-01-174-0/+44
* sci-biology/gbrowse: added dev-perl/TermReadKey to dependenciesMartin Mokrejs2012-01-173-13/+18
* sci-biology/libgtextutils: Gordon text utils libraryMartin Mokrejs2012-01-164-0/+41
* Convert to thin manifests (as suggested by alexxy and jlec)Andreas K. Huettel (dilfridge)2012-01-1493-693/+0
* Removed because the sources cannot be fetchedAndreas K. Huettel (dilfridge)2012-01-143-27/+5
* Removed because the file is non-fetchableAndreas K. Huettel (dilfridge)2012-01-143-27/+5
* sci-biology/artemis-bin: DNA sequence viewer, annotation (Artemis) and compar...Martin Mokrejs2012-01-084-0/+44
* sci-biology/artemis: DNA sequence viewer, annotation (Artemis) and comparison...Martin Mokrejs2012-01-084-0/+61
* Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciMartin Mokrejs2012-01-084-0/+53
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| * New package, ebuild written by meAndrey Kislyuk2012-01-084-0/+53
* | sci-biology/manatee-igs: new package for prokaryotic genome annotation and ed...Martin Mokrejs2012-01-084-0/+101
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* switch sci herd to sci-* sub herds, full overlay re-manifestSébastien Fabbro2012-01-0322-161/+22
* Sync ebuild to use install4j as in sci-biology/tablet-bin. Awaiting a fix fro...Martin Mokrejs2011-12-265-46/+54
* New package, ebuild written by meAndrey Kislyuk2011-12-183-0/+42
* New package, ebuild written by meAndrey Kislyuk2011-12-186-2/+99
* ebuild doc cleanupMartin Mokrejs2011-12-133-5/+9
* A seed-driven progressive assembly programMartin Mokrejs2011-12-134-0/+47
* sci-biology/estscan: added Manifest fileMartin Mokrejs2011-12-132-2/+6
* added configuration.php.patch for VHOSTS setupMartin Mokrejs2011-12-123-2/+13
* sci-biology/est2uni: example of necessary config changes for vhosts setupMartin Mokrejs2011-12-121-0/+12
* removed arches for this -9999 ebuild for sanityMartin Mokrejs2011-12-122-2/+2
* fix determination of svn-based checkout number required for buildingMartin Mokrejs2011-12-123-4/+15
* remove offending double-quotesMartin Mokrejs2011-12-121-3/+3
* ebuild cleanup, works, releasing for testingMartin Mokrejs2011-12-124-16/+29
* fix sanbox violations on some systemsMartin Mokrejs2011-12-123-2/+12
* added MYPV to the ebuild to make it more easily re-usableMartin Mokrejs2011-12-123-4/+11
* sci-biology/tablet-bin: ebuild cleanup, version bumpMartin Mokrejs2011-12-091-1/+2
* sci-biology/tablet-bin: ebuild cleanup, version bumpMartin Mokrejs2011-12-091-1/+1
* sci-biology/tablet-bin: ebuild cleanup, version bumpMartin Mokrejs2011-12-094-23/+90
* sci-biology/mira: version bumpMartin Mokrejs2011-12-084-0/+104
* sci-biology/biopython: 1.58 version bumpMartin Mokrejs2011-12-075-0/+395
* New package, ebuild written by meAndrey Kislyuk2011-11-282-0/+27
* Bump do fit with embassy-6.4.0Justin Lecher2011-10-172-7/+7
* In main treeAndrey Kislyuk2011-10-094-51/+0
* Use Fedora hosting because unpstream removed the patchesJustin Lecher2011-09-243-8/+12
* Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciJustin Lecher2011-09-233-7/+42
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| * sci-biology/sra_sdk-2.1.6: adjust to altered source tree strcuture, add weird...Martin Mokrejs2011-09-233-6/+34
| * sci-biology/sra_sdk-2.1.6: version bumpMartin Mokrejs2011-09-223-3/+10
* | Updated to new revision schemeJustin Lecher2011-09-191-4/+4
* | Silent upstream bumpJustin Lecher2011-09-193-8/+14
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* moved to new release download link and version bump, documented that included...Martin Mokrejs2011-09-104-8/+16
* Point to current HOMEPAGEMartin Mokrejs2011-09-084-16/+10
* round of manifestSébastien Fabbro2011-08-062-0/+3
* Make sure portage does not run gbrowse_metadb_config.pl otherwise sandbox vio...Martin Mokrejs2011-07-306-5/+110