| Commit message (Expand) | Author | Age | Files | Lines |
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| * | sci-biology/kat: respect sse CPU USE flags |   Martin Mokrejš | 2016-12-09 | 1 | -3/+7 |
| * | sci-biology/kat: | Martin Mokrejš | 2016-12-09 | 1 | -6/+14 |
| * | sci-biology/jellyfish: version bump; respect sse CPU USE flag | Martin Mokrejš | 2016-12-09 | 5 | -3/+81 |
| * | sci-biology/freebayes: fix package herd name | Martin Mokrejš | 2016-12-09 | 1 | -2/+2 |
| * | sci-biology/grass: introduce -9999 live version, drop old | Martin Mokrejš | 2016-12-07 | 4 | -43/+309 |
| * | sci-biology/trinityrnaseq: upstream removes fasta_tool script in future versions | Martin Mokrejš | 2016-12-07 | 1 | -0/+1 |
| * | sci-biology/annovar: new package | Martin Mokrejš | 2016-12-07 | 3 | -0/+52 |
| * | sci-biology/ensembl-tools: mimic upstream's INSTALL.pl so we can install on G... | Martin Mokrejš | 2016-12-07 | 1 | -15/+22 |
| * | sci-biology/SnpEff: fix installation on PREFIX | Martin Mokrejš | 2016-12-07 | 1 | -6/+6 |
| * | sci-biology/SnpEff: version bump, may be moved to our main repo | Martin Mokrejš | 2016-12-07 | 2 | -8/+10 |
| * | Merge branch 'master' of ssh://github.com/gentoo-science/sci |   Christoph Junghans | 2016-12-06 | 2 | -0/+51 |
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| | * | sci-biology/psychopy: version bump (#706) |   Horea Christian | 2016-12-03 | 2 | -0/+51 |
| * | | sci-biology/jannovar-bin: version bump | Martin Mokrejš | 2016-12-04 | 3 | -32/+43 |
| * | | sci-biology/jannovar: version bump, seems only one jar can be directly executed | Martin Mokrejš | 2016-12-04 | 2 | -16/+12 |
| * | | sci-biology/plinkseq: fixing issues with bundled dev-libs/protobuf and www-se... | Martin Mokrejš | 2016-12-04 | 2 | -3/+64 |
| * | | sci-biology/BRAKER: version bump, point to additional dependency | Martin Mokrejš | 2016-12-03 | 2 | -4/+3 |
| * | | sci-biology/maker: record required augustus version actually | Martin Mokrejš | 2016-12-03 | 1 | -1/+4 |
| * | | sci-biology/ncbi-tools++: add a comment about >=gcc-5.3.0 incompatibility | Martin Mokrejš | 2016-12-03 | 1 | -0/+3 |
| * | | sci-biology/ncbi-tools++: fix bug #579248#c by disabling more tests | Martin Mokrejš | 2016-12-03 | 3 | -0/+13 |
| * | | sci-biology/ensembl-tools: add missing dependency | Martin Mokrejš | 2016-12-02 | 1 | -3/+2 |
| * | | sci-biology/freebayes: note the many bundled deps we need to unbundle | Martin Mokrejš | 2016-12-02 | 1 | -0/+64 |
| * | | sci-biology/ensembl-tools: note dependency not yet in science overlay | Martin Mokrejš | 2016-12-02 | 2 | -3/+5 |
| * | | sci-biology/stacks: add missing dependency | Martin Mokrejš | 2016-12-02 | 1 | -1/+2 |
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| * | sci-biology/augustus: zap -O3 CFLAG from src/Makefile | Martin Mokrejš | 2016-12-01 | 1 | -1/+2 |
| * | sci-biology/gmap: version bump; drop unused USE flags from metadata.xml | Martin Mokrejš | 2016-12-01 | 3 | -0/+32 |
| * | sci-biology/stacks: version bump; drop bundled htslib sources, bug #601366 | Martin Mokrejš | 2016-12-01 | 2 | -6/+14 |
| * | sci-biology/trinityrnaseq: do not install fasta_tool which belongs to sci-bio... | Martin Mokrejš | 2016-12-01 | 3 | -3/+3 |
| * | sci-biology/twinscan: add missing space breaking GLIB_CFLAGS | Martin Mokrejš | 2016-12-01 | 1 | -1/+1 |
| * | sci-biology/kat: version bump, blocked by upstream issue #61 | Martin Mokrejš | 2016-11-30 | 2 | -3/+9 |
| * | sci-biology/Jannovar-bin: replaced by sci-biology/jannovar, deleting | Martin Mokrejš | 2016-11-15 | 3 | -45/+0 |
| * | sci-biology/jannovar: working ebuild, although maven re-fetches 95MB of its deps | Martin Mokrejš | 2016-11-15 | 1 | -8/+35 |
| * | sci-biology/VarScan: install upstream jar with *.java and *.class files | Martin Mokrejš | 2016-11-15 | 2 | -5/+11 |
| * | Revert "sci-biology/VarScan: remove a package skeleton, no sources available" | Martin Mokrejš | 2016-11-15 | 3 | -0/+42 |
| * | sci-biology/VarScan-bin: use upstream binaries | Martin Mokrejš | 2016-11-15 | 3 | -0/+44 |
| * | sci-biology/VarScan: remove a package skeleton, no sources available | Martin Mokrejš | 2016-11-15 | 3 | -42/+0 |
| * | sci-biology/psychopy: Fix python dependency in media-libs/opencv |   Justin Lecher | 2016-11-12 | 6 | -96/+3 |
| * | sci-biology/igv: bump hardcoded version of needed JAR dependency | Martin Mokrejš | 2016-11-11 | 1 | -1/+1 |
| * | sci-biology/MeV: record java deps properly | Martin Mokrejš | 2016-11-09 | 1 | -3/+8 |
| * | sci-biology/igv: fix DEPS so that ebuild+repoman are happy (but emerge compla... | Martin Mokrejš | 2016-11-08 | 3 | -9/+98 |
| * | sci-biology/igv: change 'dev-java/guava:17' to 'dev-java/guava:*' | Martin Mokrejš | 2016-11-08 | 2 | -3/+3 |
| * | Correct permissions and drop hidden files | Justin Lecher | 2016-10-29 | 2 | -0/+0 |
| * | Follow up cleaning of obsolete python implementations | Justin Lecher | 2016-10-28 | 1 | -1/+1 |
| * | Bulk fix of obsolete python versions | Justin Lecher | 2016-10-28 | 1 | -4/+6 |
| * | sci-biology/kat: fix SRC_URI | Martin Mokrejš | 2016-10-17 | 2 | -9/+2 |
| * | sci-biology/kat: new package | Martin Mokrejš | 2016-10-17 | 4 | -0/+71 |
| * | sci-biology/mothur: shutdown QC error about IUSE=boost missing | Martin Mokrejš | 2016-10-15 | 1 | -1/+2 |
| * | Merge remote-tracking branch 'github/master' |   Marius Brehler | 2016-10-12 | 32 | -412/+331 |
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| | * | sci-biology/hmmer: Remove, latest version in main tree |   David Seifert | 2016-10-09 | 5 | -159/+0 |
| | * | sci-biology/consed: Remove, latest version in main tree | David Seifert | 2016-10-03 | 3 | -107/+0 |
| | * | sci-biology/nilearn: fixed gtk testing error (#690) | Horea Christian | 2016-10-02 | 5 | -5/+10 |
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