Get Gentoo!
gentoo.org sites
gentoo.org Wiki Bugs Forums Packages
Planet Archives Sources
Infra Status
aboutsummaryrefslogtreecommitdiff
path: root/sci-biology
Commit message (Expand)AuthorAgeFilesLines
* sci-biology/wcd: Chop DESCRIPTION to 80 charsJustin Lecher2015-12-031-1/+1
* sci-biology/wcd: Drop bundled precompiled object filesJustin Lecher2015-12-031-0/+5
* sci-biology/wcd: add note on supported MPI implementationsMartin Mokrejš2015-12-032-0/+5
* sci-biology/wcd: also install some documentation, albeit probably oldMartin Mokrejš2015-12-033-1/+9
* sci-biology/wcd: renamed patch filesMartin Mokrejš2015-12-023-0/+5
* sci-biology/wcd: fix SMartin Mokrejš2015-12-022-0/+5
* sci-biology/scbi_fasta: new packageMartin Mokrejš2015-12-024-0/+44
* sci-biology/scbi_mapreduce: new packageMartin Mokrejš2015-12-024-0/+47
* sci-biology/full_lengther_next: new packageMartin Mokrejš2015-12-024-0/+52
* sci-biology/scbi_blast: new packageMartin Mokrejš2015-12-024-0/+46
* sci-biology/scbi_plot: new packageMartin Mokrejš2015-12-024-0/+46
* sci-biology/maker: add DEPENDency on dev-perl/Module-BuildMartin Mokrejš2015-12-012-0/+4
* sci-biology/repeatmasker: rename and move the patch file; drop old patch for ...Martin Mokrejš2015-12-013-122/+7
* sci-biology/repeatmasker: added file checksum; add missing quotesMartin Mokrejš2015-12-014-4/+110
* sci-biology/mothur: version bump; update makefile patch, the other patch from...Martin Mokrejš2015-12-015-0/+125
* sci-biology/repeatmasker: improve einfo messageMartin Mokrejš2015-11-242-1/+6
* sci-biology/repeatmasker: heavily patch configure to return error codes and d...Martin Mokrejš2015-11-245-0/+238
* sci-biology/maker: added DEPENDencies on two new dev-perl/ packages added by ...Martin Mokrejš2015-11-241-4/+4
* Merge branch 'master' of ssh://github.com/gentoo-science/sciChristoph Junghans2015-11-231-1/+1
|\
| * Merge pull request #539 from TheChymera/patch-1Justin Lecher2015-11-231-1/+1
| |\
| | * typoHorea Christian2015-11-211-1/+1
* | | sci-biology/ncbi-blast+-2.2.31: version bump, seems that some parts of the nc...Martin Mokrejš2015-11-225-1/+368
|/ /
* | sci-biology/trinityrnaseq: version bump but dropping KEYWORDS because we relo...Martin Mokrejš2015-11-214-0/+105
* | sci-biology/parafly: document a recent upstream bugreport from githubMartin Mokrejš2015-11-212-0/+6
* | sci-biology/maker: document opened Gentoo bugzilla ticketsMartin Mokrejš2015-11-202-3/+6
* | sci-biology/maker: depend on mpich2 when USE=mpi, add back hard DEPENDency on...Martin Mokrejš2015-11-202-9/+52
* | sci-biology/maker: respect USE=mpi, remove hard DEPENDency on repeatmasker-li...Martin Mokrejš2015-11-202-5/+16
* | sci-biology/repeatmasker-libraries: version bump and improve einfo navigation...Martin Mokrejš2015-11-204-0/+52
|/
* sci-biology/hmmer: add updated patchesMartin Mokrejš2015-11-202-0/+102
* sci-biology/hmmer: fix ${S} variableMartin Mokrejš2015-11-192-0/+6
* sci-biology/ffindex: install under USE=-mpi cases as wellMartin Mokrejš2015-11-192-1/+8
* sci-biology/hmmer: version bumpMartin Mokrejš2015-11-194-0/+65
* sci-biology/ffindex: add DEPEND on virtual/mpiMartin Mokrejš2015-11-192-1/+5
* sci-biology/ffindex: add optional USE=mpiMartin Mokrejš2015-11-192-2/+10
* sci-biology/ffindex: fix HOMEPAGE, version bumpMartin Mokrejš2015-11-193-4/+10
* sci-biology/TransDecoder: note that Pfam-AB was discontinuedMartin Mokrejš2015-11-192-3/+7
* sci-biology/TransDecoder: update homepageMartin Mokrejš2015-11-192-1/+5
* sci-biology/TransDecoder: install properly perl modules; fix PERL5INC paths b...Martin Mokrejš2015-11-195-157/+63
* sci-biology/BBmap: version bumpMartin Mokrejš2015-11-193-3/+8
* Merge pull request #535 from TheChymera/fslJustin Lecher2015-11-162-0/+11
|\
| * sci-biology/fsl: added info about updating environmentHorea Christian2015-11-142-0/+11
* | sci-biology/codonw: add original Thesis of John Peden describing codonw packa...Martin Mokrejš2015-11-153-2/+9
* | sci-biology/BBmap: version bump; apply also the UnicodeToAscii.patchMartin Mokrejš2015-11-153-1/+8
* | sci-biology/Rcorrector: add einfo() message that default kmer size 23 is subo...Martin Mokrejš2015-11-152-0/+9
* | sci-biology/SEECER: add einfo() message that default kmer size 17 is suboptimalMartin Mokrejš2015-11-152-2/+16
* | sci-biology/Rcorrector: respect CXXFLAGSMartin Mokrejš2015-11-152-1/+6
* | sci-biology/Rcorrector: new packageMartin Mokrejš2015-11-133-0/+49
* | sci-biology/jellyfish: fix filename generated by pkgconfigMartin Mokrejš2015-11-132-2/+5
* | sci-biology/SEECER: patch crappy shellscripts to at leats die on error; requi...Martin Mokrejš2015-11-133-7/+48
* | sci-biology/SEECER: remove hardcoded pathsMartin Mokrejš2015-11-133-0/+59