From 3766397473793494a605892e9c0f0e8a448fcd4e Mon Sep 17 00:00:00 2001 From: "Justin Lecher (jlec)" Date: Sun, 8 Nov 2009 14:35:29 +0100 Subject: sci-libs/cctbx version bump fixes boost <-> python-2.6.4 issues (Portage version: 2.2_rc48/git/Linux x86_64) (Unsigned Manifest commit) --- sci-libs/cctbx/ChangeLog | 9 ++ sci-libs/cctbx/Manifest | 18 +-- sci-libs/cctbx/cctbx-2009.09.28.1034.ebuild | 2 +- sci-libs/cctbx/cctbx-2009.11.01.0123-r1.ebuild | 204 +++++++++++++++++++++++++ sci-libs/cctbx/cctbx-2009.11.01.0123.ebuild | 196 ++++++++++++++++++++++++ sci-libs/cctbx/files/fix-scons.patch | 13 ++ 6 files changed, 429 insertions(+), 13 deletions(-) create mode 100644 sci-libs/cctbx/cctbx-2009.11.01.0123-r1.ebuild create mode 100644 sci-libs/cctbx/cctbx-2009.11.01.0123.ebuild create mode 100644 sci-libs/cctbx/files/fix-scons.patch diff --git a/sci-libs/cctbx/ChangeLog b/sci-libs/cctbx/ChangeLog index ac45d4201..c863d4e8f 100644 --- a/sci-libs/cctbx/ChangeLog +++ b/sci-libs/cctbx/ChangeLog @@ -2,6 +2,15 @@ # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ +*cctbx-2009.11.01.0123-r1 (08 Nov 2009) +*cctbx-2009.11.01.0123 (08 Nov 2009) + + 08 Nov 2009; Justin Lecher (jlec) + cctbx-2009.09.28.1034.ebuild, +cctbx-2009.11.01.0123.ebuild, + +cctbx-2009.11.01.0123-r1.ebuild, +files/fix-scons.patch: + version bump which fixes boost <-> python-2.6.2 issues + QA review + 28 Oct 2009; Justin Lecher (jlec) cctbx-2009.09.28.1034.ebuild: fix for bug 289032 diff --git a/sci-libs/cctbx/Manifest b/sci-libs/cctbx/Manifest index 15bb3ab4e..dee1d9292 100644 --- a/sci-libs/cctbx/Manifest +++ b/sci-libs/cctbx/Manifest @@ -1,18 +1,12 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - AUX 2009.02.15.2320-sandbox-violations-chmod.patch 467 RMD160 11a55d71c9a238cf8c40f1760344c27c65a53922 SHA1 03ce887b4ddaf72310986d97c8add9a7a73c6fb0 SHA256 1c79b9f3bb0215dca39def9b6ba0bdb678022b51345da1567d0f4952951bdcd1 +AUX fix-scons.patch 426 RMD160 130650ccaa32d0c981b2bf8c17cd7d430c5afa9f SHA1 f9f0dec5f5041c3d3b9cbfeb37a1d229c0a4ca2b SHA256 bcb19bc144507ad7f1829f88277c41248a0ed2382ce131d6579fe61e9fa9ba84 DIST cctbx-2009.02.15.2320.tar.gz 12800622 RMD160 8d95db0054e8ba9378e46e9d5d2d7b333418eeb4 SHA1 1d3e5aad9d1c4fd6617295fc3346c079e7c758d9 SHA256 336946867246ed3cf7f697dc9bf0cc21443b7fb9600b24696b4d8d3cb5773200 DIST cctbx-2009.09.28.1034.tar.gz 14359425 RMD160 04b932f6dd2665ffd2aa1a21462993ddf0f2e9c4 SHA1 47a529fa596eddc04c93673da16a688617ce07dd SHA256 1714c7a7985c1709baa9786e12dcc24f0073b76e020d194be24fbbf5b4c8504e +DIST cctbx-2009.11.01.0123.tar.gz 14604079 RMD160 77cc84d4b9e35e7a87f807d8669efb939b2e82ce SHA1 7db71a62786b82f47999919a9411938b123d5b4d SHA256 31e7f79424360f963c6eae528a9d289db4b53c1f7fe4aa9de71201e9d14bc5af EBUILD cctbx-2009.02.15.2320-r2.ebuild 4644 RMD160 6ea87345c030c9c2ec512ac8be9b8c580cb2caa9 SHA1 614dce37aee6ac67b689e50a510dccd3bb81fe59 SHA256 7977fcdf1cac193e7b236ad771dfb047ecf4c2ef77b34aab18d0f1fc894ddeec EBUILD cctbx-2009.02.15.2320-r3.ebuild 5686 RMD160 7ccf97179ee2540a89052200750675e588075e77 SHA1 8e77b701ab656793b704dc747cf6555b39b34257 SHA256 9d987f67fa1fa2eec9a2b0dfa2784170afe871c97bc94eb3ef1bd600ef0c3d3b -EBUILD cctbx-2009.09.28.1034.ebuild 5777 RMD160 b13fdb88c4d32d0f393a1f9a61a74ae73aa98d0a SHA1 75adbb573431c23e4e96dd3ef3eca7a3d93abd20 SHA256 88640e98694c2bc554bb0ffd18b4120dcfff6e3167bc5b7063765be9d07f69ea -MISC ChangeLog 1918 RMD160 9d599a132e5d8aaa8bb772d12d284fd5b53c16ce SHA1 e24f79df0bb14b39cd631493297dc16e722772e4 SHA256 5db999ba5abcaa642e58cfa3d8497279186e0091e019c33e9190d4f1134565d0 +EBUILD cctbx-2009.09.28.1034.ebuild 5783 RMD160 eb0d11521e3c210a2dae87256622129f4911fcab SHA1 23f050fa48ef4e144e178e278d58ce2fe0706ba8 SHA256 94a78d9f0e4d2bc83a48ede16abc4af63f432ceb4eb05b2f96016ee598cb8866 +EBUILD cctbx-2009.11.01.0123-r1.ebuild 5838 RMD160 748804da49dc5a500db33212235b7ed40ddb5fa2 SHA1 7672b2bbe38f3c21aa796a1a24cc4a0e035c57d8 SHA256 38c0f6ceb17e9ae9cac2cc7b7838eaeb0063e4657b5b2a36ed5c0567c87b43a8 +EBUILD cctbx-2009.11.01.0123.ebuild 5783 RMD160 eb0d11521e3c210a2dae87256622129f4911fcab SHA1 23f050fa48ef4e144e178e278d58ce2fe0706ba8 SHA256 94a78d9f0e4d2bc83a48ede16abc4af63f432ceb4eb05b2f96016ee598cb8866 +MISC ChangeLog 2246 RMD160 b4399b64d28d8e3466c2ed849a07a3323f60e0e8 SHA1 288df3586935eccf4488d4b85fcf576efeefec33 SHA256 00b24d80452dc434bfbd4477e4cbc271f8b96063ded3152ed22db95dc337f7bf MISC metadata.xml 438 RMD160 79ad38c94abc71ba32abccdcd670f2f6802c2df3 SHA1 1ebbff28f7e4d135b26b951b6111f6803f78413c SHA256 94d589a2836bffe732cdf993e9b38afc1cde4683a5e5669c44daf6b69595e8da ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.11 (GNU/Linux) - -iEYEARECAAYFAkroqvYACgkQgAnW8HDreRa6sQCdFnYjCFPF6vk/G/LkGfVbpsbg -d5QAoItsV9u70uG5WUNl4BZ2bZ4l1xLm -=Wqjg ------END PGP SIGNATURE----- diff --git a/sci-libs/cctbx/cctbx-2009.09.28.1034.ebuild b/sci-libs/cctbx/cctbx-2009.09.28.1034.ebuild index bd63fb9b3..a2c3eb6fd 100644 --- a/sci-libs/cctbx/cctbx-2009.09.28.1034.ebuild +++ b/sci-libs/cctbx/cctbx-2009.09.28.1034.ebuild @@ -121,7 +121,7 @@ src_compile() { src_test(){ source "${MY_B}"/setpaths_all.sh - libtbx.python $(libtbx.show_dist_paths boost_adaptbx)/tst_rational.py && \ + libtbx.python $(libtbx.show_dist_paths boost_adaptbx)/tests/tst_rational.py && \ libtbx.python ${SCITBX_DIST}/run_tests.py ${MAKEOPTS_EXP} && \ libtbx.python ${CCTBX_DIST}/run_tests.py ${MAKEOPTS_EXP} \ || die "test failed" diff --git a/sci-libs/cctbx/cctbx-2009.11.01.0123-r1.ebuild b/sci-libs/cctbx/cctbx-2009.11.01.0123-r1.ebuild new file mode 100644 index 000000000..96f56ba06 --- /dev/null +++ b/sci-libs/cctbx/cctbx-2009.11.01.0123-r1.ebuild @@ -0,0 +1,204 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI="2" + +inherit toolchain-funcs python eutils + +MY_PV="${PV//./_}" + +DESCRIPTION="Computational Crystallography Toolbox" +HOMEPAGE="http://cctbx.sourceforge.net/" +SRC_URI="http://cci.lbl.gov/cctbx_build/results/${MY_PV}/${PN}_bundle.tar.gz -> ${P}.tar.gz" +LICENSE="cctbx-2.0" +SLOT="0" +KEYWORDS="~x86 ~amd64" +IUSE="minimal openmp threads" + +RDEPEND="!minimal? ( sci-chemistry/cns + sci-chemistry/shelx )" +DEPEND="${RDEPEND} + >=dev-util/scons-1.2" + +S="${WORKDIR}" +MY_S="${WORKDIR}"/cctbx_sources +MY_B="${WORKDIR}"/cctbx_build + +pkg_setup() { + python_version + if use openmp && + [[ $(tc-getCC)$ == *gcc* ]] && + ( [[ $(gcc-major-version)$(gcc-minor-version) -lt 42 ]] || + ! built_with_use sys-devel/gcc openmp ) + then + ewarn "You are using gcc and OpenMP is only available with gcc >= 4.2 " + ewarn "If you want to build fftw with OpenMP, abort now," + ewarn "and switch CC to an OpenMP capable compiler" + fi +} + +src_prepare() { + python_version + + local opts + local optsld + + # Wants to chmod /usr/bin/python +# epatch "${FILESDIR}"/${PV}-sandbox-violations-chmod.patch + + rm -rf "${MY_S}/scons" # "${MY_S}/boost" ## needs boost 1.39 + + mkdir -p "${MY_S}"/scons/src/ "${MY_S}/boost" + + ln -sf /usr/$(get_libdir)/scons-1.2.0 "${MY_S}"/scons/src/engine || die +# ln -sf /usr/include/boost "${MY_S}/boost/" + + # Get CXXFLAGS in format suitable for substitition into SConscript + for i in ${CXXFLAGS}; do + opts="${opts} \"${i}\"," + done + + # Strip off the last comma + opts=${opts%,} + + # Fix CXXFLAGS + sed -i \ + -e "s:\"-O3\", \"-ffast-math\":${opts}:g" \ + ${MY_S}/libtbx/SConscript + + # Get LDFLAGS in format suitable for substitition into SConscript + for i in ${LDFLAGS}; do + optsld="${optsld} \"${i}\"," + done + + optsld=${optsld%,} + + # Fix LDFLAGS which should be as-needed ready + sed -i \ + -e "s:\"-shared\":\"-shared\", ${optsld}:g" \ + ${MY_S}/libtbx/SConscript +} + +src_configure() { + local compiler + local myconf + + myconf="${MY_S}/libtbx/configure.py" + + # Get compiler in the right way + compiler=$(expr match "$(tc-getCC)" '.*\([a-z]cc\)') + myconf="${myconf} --compiler=${compiler}" + + # Precompiling python scripts. It is done in upstreams install script. Perhaps use python_mod_compile, + # but as this script works we should stick to it. + ${python} "${MY_S}/libtbx/command_line/py_compile_all.py" + + # Additional USE flag usage + check_use openmp + myconf="${myconf} --enable-openmp-if-possible=${USE_openmp}" + + use threads && USEthreads="--enable-boost-threads" && \ + ewarn "If using boost threads openmp support is disabled" + + myconf="${myconf} ${USE_threads} --scan-boost" + + mkdir "${MY_B}" && myconf="${myconf} --current_working_directory=${MY_B}" + cd "${MY_B}" + + myconf="${myconf} --build=release fftw3tbx rstbx smtbx mmtbx clipper" + einfo "configuring with ${python} ${myconf}" + + ${python} ${myconf} \ + || die "configure failed" +} + +src_compile() { + local makeopts_exp + + cd "${MY_B}" + + makeopts_exp=${MAKEOPTS/j/j } + makeopts_exp=${makeopts_exp%-l[0-9]*} + + source setpaths_all.sh + + einfo "compiling with libtbx.scons ${makeopts_exp}" + libtbx.scons ${makeopts_exp} .|| die "make failed" +} + +src_test(){ + source "${MY_B}"/setpaths_all.sh + libtbx.python $(libtbx.show_dist_paths boost_adaptbx)/tests/tst_rational.py && \ + libtbx.python ${SCITBX_DIST}/run_tests.py ${MAKEOPTS_EXP} && \ + libtbx.python ${CCTBX_DIST}/run_tests.py ${MAKEOPTS_EXP} \ + || die "test failed" +} + +src_install(){ + # This is what Bill Scott does in the fink package. Do we need this as well? +# -e "s:prepend:append:g" \ + + find cctbx_build/ -type f \( -name "*.py" -o -name "*sh" \) -exec \ + sed -e "s:${MY_S}:/usr/$(get_libdir)/cctbx/cctbx_sources:g" \ + -e "s:${MY_B}:/usr/$(get_libdir)/cctbx/cctbx_build:g" \ + -i '{}' \; || die "Fail to correct path" + + ebegin "removing unnessary files" + rm -r "${S}"/cctbx_sources/scons || die "failed to remove uneeded scons" + find "${S}" -type f -name "*conftest*" -exec rm -f '{}' \; || die "failed to remove uneeded *.o" + find "${S}" -type f -name "*.o" -exec rm -f '{}' \; || die "failed to remove uneeded *.o" + find "${S}" -type f -name "*.c" -exec rm -f '{}' \; || die "failed to remove uneeded *.c" + find "${S}" -type f -name "*.cpp" -exec rm -f '{}' \; || die "failed to remove uneeded *.cpp" + find "${S}" -type f -name "*.pyc" -exec rm -f '{}' \; || die "failed to remove uneeded *.pyc" + eend + + insinto /usr/$(get_libdir)/${PN} + doins -r cctbx_sources cctbx_build || die + +# fperms cannot handle wildcards + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/*sh && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/lib/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/array_family/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/serialization/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/error/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/fftpack/timing/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/lbfgs/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/chiltbx/handle_test && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/bin/* || \ + die + + insinto /etc/profile.d/ + newins "${MY_B}"/setpaths.sh 30cctbx.sh && \ + newins "${MY_B}"/setpaths.csh 30cctbx.csh || \ + die + + sed \ + -e "s:python${PYVER}:python:g"\ + -i "${MY_B}"/setpaths* || die + + cat >> "${T}"/30cctbx <<- EOF + LDPATH="/usr/$(get_libdir)/${PN}/cctbx_build/lib" + EOF + + doenvd "${T}"/30cctbx || die +} + +pkg_postinst () { + python_mod_optimize /usr/$(get_libdir)/${PN}/cctbx_sources +} + +pkg_postrm () { + python_mod_cleanup /usr/$(get_libdir)/${PN}/cctbx_sources +} + +check_use() { + for var in $@; do + if use ${var}; then + printf -v "USE_$var" True + else + printf -v "USE_$var" False + fi + shift + done +} diff --git a/sci-libs/cctbx/cctbx-2009.11.01.0123.ebuild b/sci-libs/cctbx/cctbx-2009.11.01.0123.ebuild new file mode 100644 index 000000000..a2c3eb6fd --- /dev/null +++ b/sci-libs/cctbx/cctbx-2009.11.01.0123.ebuild @@ -0,0 +1,196 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI="2" + +inherit toolchain-funcs python eutils + +MY_PV="${PV//./_}" + +DESCRIPTION="Computational Crystallography Toolbox" +HOMEPAGE="http://cctbx.sourceforge.net/" +SRC_URI="http://cci.lbl.gov/cctbx_build/results/${MY_PV}/${PN}_bundle.tar.gz -> ${P}.tar.gz" +LICENSE="cctbx-2.0" +SLOT="0" +KEYWORDS="~x86 ~amd64" +IUSE="minimal openmp threads" + +RDEPEND="!minimal? ( sci-chemistry/cns + sci-chemistry/shelx )" +DEPEND="${RDEPEND} + >=dev-util/scons-1.2" + +S="${WORKDIR}" +MY_S="${WORKDIR}"/cctbx_sources +MY_B="${WORKDIR}"/cctbx_build + +pkg_setup() { + python_version + if use openmp && + [[ $(tc-getCC)$ == *gcc* ]] && + ( [[ $(gcc-major-version)$(gcc-minor-version) -lt 42 ]] || + ! built_with_use sys-devel/gcc openmp ) + then + ewarn "You are using gcc and OpenMP is only available with gcc >= 4.2 " + ewarn "If you want to build fftw with OpenMP, abort now," + ewarn "and switch CC to an OpenMP capable compiler" + fi +} + +src_prepare() { + # Wants to chmod /usr/bin/python +# epatch "${FILESDIR}"/${PV}-sandbox-violations-chmod.patch + + rm -rf "${MY_S}/scons" # "${MY_S}/boost" ## needs boost 1.39 + + mkdir -p "${MY_S}"/scons/src/ "${MY_S}/boost" + + ln -sf /usr/$(get_libdir)/scons-1.2.0 "${MY_S}"/scons/src/engine || die +# ln -sf /usr/include/boost "${MY_S}/boost/" +} + +src_compile() { + python_version + + local MYCONF + local MAKEOPTS_EXP + local OPTS + local OPTSLD + + MYCONF="${MY_S}/libtbx/configure.py" + + MAKEOPTS_EXP=${MAKEOPTS/j/j } + MAKEOPTS_EXP=${MAKEOPTS_EXP%-l[0-9]*} + + # Get CXXFLAGS in format suitable for substitition into SConscript + for i in ${CXXFLAGS}; do + OPTS="${OPTS} \"${i}\"," + done + + # Strip off the last comma + OPTS=${OPTS%,} + + # Fix CXXFLAGS + sed -i \ + -e "s:\"-O3\", \"-ffast-math\":${OPTS}:g" \ + ${MY_S}/libtbx/SConscript + + # Get LDFLAGS in format suitable for substitition into SConscript + for i in ${LDFLAGS}; do + OPTSLD="${OPTSLD} \"${i}\"," + done + + OPTSLD=${OPTSLD%,} + + # Fix LDFLAGS which should be as-needed ready + sed -i \ + -e "s:\"-shared\":\"-shared\", ${OPTSLD}:g" \ + ${MY_S}/libtbx/SConscript + + # Get compiler in the right way + COMPILER=$(expr match "$(tc-getCC)" '.*\([a-z]cc\)') + MYCONF="${MYCONF} --compiler=${COMPILER}" + + # Precompiling python scripts. It is done in upstreams install script. Perhaps use python_mod_compile, + # but as this script works we should stick to it. + ${python} "${MY_S}/libtbx/command_line/py_compile_all.py" + + # Additional USE flag usage + check_use openmp + MYCONF="${MYCONF} --enable-openmp-if-possible=${USE_openmp}" + use threads && USEthreads="--enable-boost-threads" && \ + ewarn "If using boost threads openmp support is disabled" + + MYCONF="${MYCONF} ${USE_threads} --scan-boost" + + mkdir "${MY_B}" && MYCONF="${MYCONF} --current_working_directory=${MY_B}" + cd "${MY_B}" + + MYCONF="${MYCONF} --build=release fftw3tbx rstbx smtbx mmtbx clipper" + einfo "configuring with ${python} ${MYCONF}" + + ${python} ${MYCONF} \ + || die "configure failed" + + source setpaths_all.sh + + einfo "compiling with libtbx.scons ${MAKEOPTS_EXP}" + libtbx.scons ${MAKEOPTS_EXP} .|| die "make failed" +} + +src_test(){ + source "${MY_B}"/setpaths_all.sh + libtbx.python $(libtbx.show_dist_paths boost_adaptbx)/tests/tst_rational.py && \ + libtbx.python ${SCITBX_DIST}/run_tests.py ${MAKEOPTS_EXP} && \ + libtbx.python ${CCTBX_DIST}/run_tests.py ${MAKEOPTS_EXP} \ + || die "test failed" +} + +src_install(){ + # This is what Bill Scott does in the fink package. Do we need this as well? +# -e "s:prepend:append:g" \ + + find cctbx_build/ -type f \( -name "*.py" -o -name "*sh" \) -exec \ + sed -e "s:${MY_S}:/usr/$(get_libdir)/cctbx/cctbx_sources:g" \ + -e "s:${MY_B}:/usr/$(get_libdir)/cctbx/cctbx_build:g" \ + -i '{}' \; || die "Fail to correct path" + + ebegin "removing unnessary files" + rm -r "${S}"/cctbx_sources/scons || die "failed to remove uneeded scons" + find "${S}" -type f -name "*conftest*" -exec rm -f '{}' \; || die "failed to remove uneeded *.o" + find "${S}" -type f -name "*.o" -exec rm -f '{}' \; || die "failed to remove uneeded *.o" + find "${S}" -type f -name "*.c" -exec rm -f '{}' \; || die "failed to remove uneeded *.c" + find "${S}" -type f -name "*.cpp" -exec rm -f '{}' \; || die "failed to remove uneeded *.cpp" + find "${S}" -type f -name "*.pyc" -exec rm -f '{}' \; || die "failed to remove uneeded *.pyc" + eend + + insinto /usr/$(get_libdir)/${PN} + doins -r cctbx_sources cctbx_build || die + +# fperms cannot handle wildcards + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/*sh && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/lib/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/array_family/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/serialization/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/error/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/fftpack/timing/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/scitbx/lbfgs/* && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/chiltbx/handle_test && \ + chmod 775 "${D}"/usr/$(get_libdir)/${PN}/cctbx_build/bin/* || \ + die + + insinto /etc/profile.d/ + newins "${MY_B}"/setpaths.sh 30cctbx.sh && \ + newins "${MY_B}"/setpaths.csh 30cctbx.csh || \ + die + + sed \ + -e "s:python${PYVER}:python:g"\ + -i "${MY_B}"/setpaths* || die + + cat >> "${T}"/30cctbx <<- EOF + LDPATH="/usr/$(get_libdir)/${PN}/cctbx_build/lib" + EOF + + doenvd "${T}"/30cctbx || die +} + +pkg_postinst () { + python_mod_optimize /usr/$(get_libdir)/${PN}/cctbx_sources +} + +pkg_postrm () { + python_mod_cleanup /usr/$(get_libdir)/${PN}/cctbx_sources +} + +check_use() { + for var in $@; do + if use ${var}; then + printf -v "USE_$var" True + else + printf -v "USE_$var" False + fi + shift + done +} diff --git a/sci-libs/cctbx/files/fix-scons.patch b/sci-libs/cctbx/files/fix-scons.patch new file mode 100644 index 000000000..945b02087 --- /dev/null +++ b/sci-libs/cctbx/files/fix-scons.patch @@ -0,0 +1,13 @@ +diff --git a/libtbx/command_line/scons.py b/libtbx/command_line/scons.py +index dee278e..71837ad 100755 +--- a/libtbx/command_line/scons.py ++++ b/libtbx/command_line/scons.py +@@ -23,7 +23,7 @@ def dummy_fetch_win32_parallel_msg(): + pass + + def run(): +- engine_path = find_scons_engine_path() ++ engine_path = "/usr/lib/scons-1.2.0" + if (engine_path is not None): + sys.path.insert(0, engine_path) + try: import SCons -- cgit v1.2.3-65-gdbad