From ce81317b1bfbf175d52799a64be6d1ced42b57cc Mon Sep 17 00:00:00 2001 From: Michael Schubert Date: Mon, 8 Jul 2024 19:50:58 +0000 Subject: dev-python/snakemake: version bump 8.16.0 Signed-off-by: Michael Schubert Signed-off-by: Andrew Ammerlaan --- dev-python/snakemake/Manifest | 2 +- dev-python/snakemake/snakemake-8.14.0.ebuild | 74 ---------------------------- dev-python/snakemake/snakemake-8.16.0.ebuild | 74 ++++++++++++++++++++++++++++ 3 files changed, 75 insertions(+), 75 deletions(-) delete mode 100644 dev-python/snakemake/snakemake-8.14.0.ebuild create mode 100644 dev-python/snakemake/snakemake-8.16.0.ebuild diff --git a/dev-python/snakemake/Manifest b/dev-python/snakemake/Manifest index 3195e9070..de4027537 100644 --- a/dev-python/snakemake/Manifest +++ b/dev-python/snakemake/Manifest @@ -1,2 +1,2 @@ DIST snakemake-7.32.4.gh.tar.gz 8885863 BLAKE2B 6bb7ff4722dd06f0edf5e8079b42f5e54d6f55f41e2987b7dae7f9b75df0d4d836138e28340e5977107a5cc0b5afe793b0d7897c501246cc1b4340eb4eca2f17 SHA512 34fef61528b18facab798652c88ed5c698ef02161e023255fdd024b7c7781c4e582cdb04b2740fdff9b6f3600acaec719742984acee57920bb48ef3b5af99d9a -DIST snakemake-8.14.0.gh.tar.gz 8662241 BLAKE2B fc36722b00cb3da11e836d5c521fe6600d176fd6fc3bd8a39336bc6a3d34bfcb689727d9990351cde247e377dca1131bda5dd84852a32ddb91fed44aa62c020e SHA512 68a0aabeed435e032d01f4d38d37c4b37ed7f624bf3768a1654daccdbf95ceb06646d7302ca04ea4f20695ec9706e015d146794aa000ec108d18d6ad09f3671b +DIST snakemake-8.16.0.gh.tar.gz 8665306 BLAKE2B 76d3455ce9a7ccc749adb5a729ab954d7a3fd97dc2432c3a0e9aba1ace1cb08e377244a2a2527c676b9709f9bb8b5af29948c0385657755bbbc8449b136fc26d SHA512 29b6ba6da5dbbd347dee45114b949c976973555c9234f8a150dcd83e4af1638c1773590320bc44284cf20ea445efb377dcf9199921ed2b4d62bad3a60a41af3c diff --git a/dev-python/snakemake/snakemake-8.14.0.ebuild b/dev-python/snakemake/snakemake-8.14.0.ebuild deleted file mode 100644 index fed1a1bbb..000000000 --- a/dev-python/snakemake/snakemake-8.14.0.ebuild +++ /dev/null @@ -1,74 +0,0 @@ -# Copyright 1999-2024 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -PYTHON_COMPAT=( python3_{11..12} ) -DISTUTILS_USE_PEP517=setuptools - -inherit distutils-r1 - -DESCRIPTION="Make-like task language" -HOMEPAGE="https://snakemake.readthedocs.io" -SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.gh.tar.gz" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="~amd64" - -# cannot import name '_helpers' from 'google.cloud' -RESTRICT="test" - -BDEPEND=" - dev-python/tomli[${PYTHON_USEDEP}] - test? ( - dev-python/requests-mock[${PYTHON_USEDEP}] - dev-python/google-api-python-client[${PYTHON_USEDEP}] - dev-python/networkx[${PYTHON_USEDEP}] - dev-python/pygments[${PYTHON_USEDEP}] - dev-python/pygraphviz[${PYTHON_USEDEP}] - net-libs/google-cloud-cpp - ) -" - -RDEPEND=" - dev-python/appdirs[${PYTHON_USEDEP}] - dev-python/immutables[${PYTHON_USEDEP}] - dev-python/ConfigArgParse[${PYTHON_USEDEP}] - dev-python/connection_pool[${PYTHON_USEDEP}] - dev-python/datrie[${PYTHON_USEDEP}] - dev-python/docutils[${PYTHON_USEDEP}] - dev-python/GitPython[${PYTHON_USEDEP}] - dev-python/humanfriendly[${PYTHON_USEDEP}] - dev-python/jinja[${PYTHON_USEDEP}] - dev-python/jsonschema[${PYTHON_USEDEP}] - dev-python/nbformat[${PYTHON_USEDEP}] - dev-python/packaging[${PYTHON_USEDEP}] - dev-python/psutil[${PYTHON_USEDEP}] - dev-python/pyyaml[${PYTHON_USEDEP}] - dev-python/requests[${PYTHON_USEDEP}] - dev-python/reretry[${PYTHON_USEDEP}] - dev-python/smart-open[${PYTHON_USEDEP}] - dev-python/snakemake-interface-executor-plugins[${PYTHON_USEDEP}] - dev-python/snakemake-interface-common[${PYTHON_USEDEP}] - dev-python/snakemake-interface-storage-plugins[${PYTHON_USEDEP}] - dev-python/snakemake-interface-report-plugins[${PYTHON_USEDEP}] - dev-python/stopit[${PYTHON_USEDEP}] - dev-python/tabulate[${PYTHON_USEDEP}] - dev-python/throttler[${PYTHON_USEDEP}] - dev-python/toposort[${PYTHON_USEDEP}] - dev-python/wrapt[${PYTHON_USEDEP}] - dev-python/yte[${PYTHON_USEDEP}] - dev-python/dpath[${PYTHON_USEDEP}] - dev-python/conda-inject[${PYTHON_USEDEP}] - sci-mathematics/pulp[${PYTHON_USEDEP}] -" - -# distutils_enable_sphinx docs \ -# dev-python/sphinxcontrib-napoleon \ -# dev-python/sphinx-argparse \ -# dev-python/sphinx-rtd-theme \ -# dev-python/docutils \ -# dev-python/recommonmark \ -# dev-python/myst-parser -distutils_enable_tests pytest diff --git a/dev-python/snakemake/snakemake-8.16.0.ebuild b/dev-python/snakemake/snakemake-8.16.0.ebuild new file mode 100644 index 000000000..f83e8feb9 --- /dev/null +++ b/dev-python/snakemake/snakemake-8.16.0.ebuild @@ -0,0 +1,74 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{11..12} ) +DISTUTILS_USE_PEP517=setuptools + +inherit distutils-r1 + +DESCRIPTION="Make-like task language" +HOMEPAGE="https://snakemake.readthedocs.io" +SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.gh.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" + +# cannot import name '_helpers' from 'google.cloud' +RESTRICT="test" + +BDEPEND=" + dev-python/tomli[${PYTHON_USEDEP}] + test? ( + dev-python/requests-mock[${PYTHON_USEDEP}] + dev-python/google-api-python-client[${PYTHON_USEDEP}] + dev-python/networkx[${PYTHON_USEDEP}] + dev-python/pygments[${PYTHON_USEDEP}] + dev-python/pygraphviz[${PYTHON_USEDEP}] + net-libs/google-cloud-cpp + ) +" + +RDEPEND=" + dev-python/appdirs[${PYTHON_USEDEP}] + dev-python/immutables[${PYTHON_USEDEP}] + dev-python/ConfigArgParse[${PYTHON_USEDEP}] + >=dev-python/connection_pool-0.0.3[${PYTHON_USEDEP}] + dev-python/datrie[${PYTHON_USEDEP}] + dev-python/docutils[${PYTHON_USEDEP}] + dev-python/GitPython[${PYTHON_USEDEP}] + dev-python/humanfriendly[${PYTHON_USEDEP}] + >=dev-python/jinja-3.0[${PYTHON_USEDEP}] + dev-python/jsonschema[${PYTHON_USEDEP}] + dev-python/nbformat[${PYTHON_USEDEP}] + dev-python/packaging[${PYTHON_USEDEP}] + dev-python/psutil[${PYTHON_USEDEP}] + dev-python/pyyaml[${PYTHON_USEDEP}] + >=dev-python/requests-2.8.1[${PYTHON_USEDEP}] + dev-python/reretry[${PYTHON_USEDEP}] + >=dev-python/smart-open-4.0[${PYTHON_USEDEP}] + >=dev-python/snakemake-interface-common-1.17.0[${PYTHON_USEDEP}] + >=dev-python/snakemake-interface-executor-plugins-9.2.0[${PYTHON_USEDEP}] + >=dev-python/snakemake-interface-storage-plugins-3.2.3[${PYTHON_USEDEP}] + >=dev-python/snakemake-interface-report-plugins-1.0.0[${PYTHON_USEDEP}] + dev-python/stopit[${PYTHON_USEDEP}] + dev-python/tabulate[${PYTHON_USEDEP}] + dev-python/throttler[${PYTHON_USEDEP}] + >=dev-python/toposort-1.10[${PYTHON_USEDEP}] + dev-python/wrapt[${PYTHON_USEDEP}] + >=dev-python/yte-1.5.1[${PYTHON_USEDEP}] + >=dev-python/dpath-2.1.6[${PYTHON_USEDEP}] + >=dev-python/conda-inject-1.3.1[${PYTHON_USEDEP}] + >=sci-mathematics/pulp-2.3.1[${PYTHON_USEDEP}] +" + +# distutils_enable_sphinx docs \ +# dev-python/sphinxcontrib-napoleon \ +# dev-python/sphinx-argparse \ +# dev-python/sphinx-rtd-theme \ +# dev-python/docutils \ +# dev-python/recommonmark \ +# dev-python/myst-parser +distutils_enable_tests pytest -- cgit v1.2.3-65-gdbad