From 8ee8fd95880516f79f8693c728d0ec218fa82277 Mon Sep 17 00:00:00 2001 From: Martin Mokrejs Date: Sun, 22 Apr 2018 13:45:10 +0200 Subject: sci-biology/kat: ignore site-wide boost-build/site-config.jam Introduce -8888 ebuild which zaps bundled stuff altogether and uses system-wide boost and jellyfish2 files. Package-Manager: Portage-2.3.28, Repoman-2.3.9 --- sci-biology/kat/kat-2.4.1.ebuild | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) (limited to 'sci-biology/kat/kat-2.4.1.ebuild') diff --git a/sci-biology/kat/kat-2.4.1.ebuild b/sci-biology/kat/kat-2.4.1.ebuild index 1df9f4430..f1635e9e8 100644 --- a/sci-biology/kat/kat-2.4.1.ebuild +++ b/sci-biology/kat/kat-2.4.1.ebuild @@ -41,7 +41,7 @@ src_prepare(){ src_configure(){ local myconf=() myconf+=( --disable-gnuplot ) # python3 does better image rendering, no need for gnuplot - use cpu_flags_x86_sse && myconf+=( $(use_with cpu_flags_x86_sse sse) ) # pass down to jellyfish-2.20/configure + use cpu_flags_x86_sse && myconf+=( $(use_with cpu_flags_x86_sse sse) ) # pass down to jellyfish-2.2.0/configure PYTHON_VERSION=3 econf ${myconf[@]} } @@ -49,7 +49,8 @@ src_compile(){ # build_boost.sh cd deps/boost || die ./bootstrap.sh --prefix=build --with-libraries=chrono,exception,program_options,timer,filesystem,system,stacktrace || die - ./b2 headers || die - ./b2 install || die + # https://github.com/TGAC/KAT/issues/92#issuecomment-383373418 + ./b2 headers --ignore-site-config || die + ./b2 install --ignore-site-config || die cd ../.. || die } -- cgit v1.2.3-65-gdbad