From dc8f115ece85ad0ba1cae058febbb79ee40b89c1 Mon Sep 17 00:00:00 2001 From: Martin Mokrejš Date: Sun, 10 Apr 2016 23:04:10 +0200 Subject: sci-biology/oases: new package Package-Manager: portage-2.2.28 --- sci-biology/oases/oases-0.2.08.ebuild | 34 ++++++++++++++++++++++++++++++++++ 1 file changed, 34 insertions(+) create mode 100644 sci-biology/oases/oases-0.2.08.ebuild (limited to 'sci-biology/oases/oases-0.2.08.ebuild') diff --git a/sci-biology/oases/oases-0.2.08.ebuild b/sci-biology/oases/oases-0.2.08.ebuild new file mode 100644 index 000000000..eff78420d --- /dev/null +++ b/sci-biology/oases/oases-0.2.08.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit eutils + +DESCRIPTION="De novo transcriptome assembler" +HOMEPAGE="http://www.ebi.ac.uk/~zerbino/oases" +SRC_URI="http://www.ebi.ac.uk/~zerbino/oases/oases_0.2.08.tgz + http://www.ebi.ac.uk/~zerbino/oases/OasesManual.pdf" +KEYWORDS="" + +LICENSE="GPL-3" +SLOT="0" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND} + >=sci-biology/velvet-1.2.08" + +S="${WORKDIR}"/oases_0.2.8 + +src_prepare(){ + epatch "${FILESDIR}"/Makefile.patch + sed -e 's#cleanobj velvet oases doc#oases#' -i Makefile || die +} + +src_install(){ + dobin oases + dodoc README.md + dodoc "${DISTDIR}"/OasesManual.pdf +} -- cgit v1.2.3-65-gdbad