From 59caf0deb45063caeff69aae22626f09b41f0b8f Mon Sep 17 00:00:00 2001 From: Justin Lecher Date: Sat, 18 Nov 2017 20:30:57 +0000 Subject: sci-biology/bismark: Fix repoman warnings Signed-off-by: Justin Lecher Package-Manager: Portage-2.3.14, Repoman-2.3.6 --- sci-biology/bismark/bismark-0.13.0.ebuild | 15 ++++++++------- 1 file changed, 8 insertions(+), 7 deletions(-) (limited to 'sci-biology') diff --git a/sci-biology/bismark/bismark-0.13.0.ebuild b/sci-biology/bismark/bismark-0.13.0.ebuild index cf380efdd..98aa75a61 100644 --- a/sci-biology/bismark/bismark-0.13.0.ebuild +++ b/sci-biology/bismark/bismark-0.13.0.ebuild @@ -1,11 +1,11 @@ -# Copyright 1999-2014 Gentoo Foundation +# Copyright 1999-2017 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -EAPI=5 +EAPI=6 inherit toolchain-funcs -DESCRIPTION="Map bisulfite converted sequence reads and determine cytosine methylation states" +DESCRIPTION="Map bisulfite converted sequence reads and cytosine methylation states" HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/bismark/" SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/${PN}/${PN}_v${PV}.tar.gz" @@ -20,11 +20,12 @@ RDEPEND="sci-biology/bowtie" S="${WORKDIR}/${PN}_v${PV}" src_install() { - dobin bismark{,2bedGraph,2report,_genome_preparation,_methylation_extractor} coverage2cytosine deduplicate_bismark + dobin \ + bismark{,2bedGraph,2report,_genome_preparation,_methylation_extractor} \ + coverage2cytosine deduplicate_bismark insinto /usr/share/${P} doins bismark_sitrep.tpl - dosym /usr/share/${P}/bismark_sitrep.tpl /usr/bin/bismark_sitrep.tpl - if use doc; then + dosym ../share/${P}/bismark_sitrep.tpl /usr/bin/bismark_sitrep.tpl + use doc \ dodoc Bismark_User_Guide.pdf RRBS_Guide.pdf license.txt RELEASE_NOTES.txt - fi } -- cgit v1.2.3