From 139254cb7db9768fd2ecde18ec6ff464f8c10ab6 Mon Sep 17 00:00:00 2001 From: Jens-Malte Gottfried Date: Thu, 28 Jun 2012 10:25:17 +0200 Subject: updated to petsc-3.3_p1 --- sci-mathematics/petsc/Manifest | 2 +- .../petsc/files/petsc-3.3-configure-pic.patch | 11 ++ .../files/petsc-3.3-disable-env-warnings.patch | 13 ++ .../petsc/files/petsc-3.3-disable-rpath.patch | 16 ++ .../petsc/files/petsc-3.3_p0-configure-pic.patch | 11 -- .../files/petsc-3.3_p0-disable-env-warnings.patch | 13 -- .../petsc/files/petsc-3.3_p0-disable-rpath.patch | 16 -- sci-mathematics/petsc/petsc-3.3_p0.ebuild | 215 --------------------- sci-mathematics/petsc/petsc-3.3_p1.ebuild | 215 +++++++++++++++++++++ 9 files changed, 256 insertions(+), 256 deletions(-) create mode 100644 sci-mathematics/petsc/files/petsc-3.3-configure-pic.patch create mode 100644 sci-mathematics/petsc/files/petsc-3.3-disable-env-warnings.patch create mode 100644 sci-mathematics/petsc/files/petsc-3.3-disable-rpath.patch delete mode 100644 sci-mathematics/petsc/files/petsc-3.3_p0-configure-pic.patch delete mode 100644 sci-mathematics/petsc/files/petsc-3.3_p0-disable-env-warnings.patch delete mode 100644 sci-mathematics/petsc/files/petsc-3.3_p0-disable-rpath.patch delete mode 100644 sci-mathematics/petsc/petsc-3.3_p0.ebuild create mode 100644 sci-mathematics/petsc/petsc-3.3_p1.ebuild (limited to 'sci-mathematics') diff --git a/sci-mathematics/petsc/Manifest b/sci-mathematics/petsc/Manifest index c1325113e..cbb272e08 100644 --- a/sci-mathematics/petsc/Manifest +++ b/sci-mathematics/petsc/Manifest @@ -1,3 +1,3 @@ DIST petsc-3.1-p8.tar.gz 15460606 SHA256 eba776e3cebf187f96ef5c638bd769602e27b5f5341be7eadb48dcad33072282 SHA512 a827492a15a3e2a7fe1dd8184b5a6f6ed1e6d6abab2d56c61075b2b0cc324982e0097548b5e944eb6e39d599c1809dbf7ec114f09834863a43a5f342622708e7 WHIRLPOOL 5591906a2816a2d71996dd8c51438920e8950c0a1a14446e6a34ed48f21bf044eb13e85846f0e66ae1b24e099b8ae0001254135ef2c4b8ccaef6f98f4d8e9d65 DIST petsc-3.2-p6.tar.gz 19641667 SHA256 49156f9db4624d9b5041e0b09e8f4d1f3463901aba3a22cb7a6a1d0d227d2cf2 SHA512 2ee674908223237eebb4371d72fba4e7b3ecedc2fa8d2fe8c3b5fd9022386a2a54415f893def2e671f80b524e023fad9e499e24fc08bd30358c18d51ed931aa0 WHIRLPOOL 7a1d2cd466511b0b8d359a4165c70ad4ff3f1010a1b954295fdbb5d2efb3050671018109aec93124884bed5a29d6f8b408c943aeed325c7a28a6cdf1aa2bcb6c -DIST petsc-3.3-p0.tar.gz 17733196 SHA256 f37fe95feb639bd914925ee10a8d71d9bc658bef3a8bdfe3b6ca35034c4c5329 SHA512 d5716a906f0432b6aa5b4b5aaa49f7479e6cae150d8167974d292244a484c025957987554457246f4f6bb97d529cb886f1e45f5dfff4761a74ca2c78ee1fa3e3 WHIRLPOOL ec259483725c9fb9d8dac27fda13c3eb4a042e5a5933b237fc95147f0acb9a870dd1ca2a163f3ae0d015ea1546ae1029bb1c52f5853fc645e56c994aa02dcb2c +DIST petsc-3.3-p1.tar.gz 17969103 RMD160 bbf0cb7e8eacd41ceefbabf63575a3a38f777fd7 SHA1 b6ef899ccffd9a31e9ddb30135661f1caf3d2c2a SHA256 100fcb2fc6702ae590a888423f0c338685f4deb7586311635204d4a872c33b0c SHA512 8c3f70b369e4194228184531b8e11515229d797ba2e78ac1e2c3182bb169b9094b4141b04d584ecfcc2915ff05506213eba209e9b47c203d8534ade0b3a420e3 WHIRLPOOL 342b46eb2e6cf3d1774630eb22b8d345f67e160792ea42bf3c649f60e2c6271c71b0a70e6fc8db589faf4e68ae6a16c3966230369959c36309bcdc11730c285d diff --git a/sci-mathematics/petsc/files/petsc-3.3-configure-pic.patch b/sci-mathematics/petsc/files/petsc-3.3-configure-pic.patch new file mode 100644 index 000000000..bbfdae1c8 --- /dev/null +++ b/sci-mathematics/petsc/files/petsc-3.3-configure-pic.patch @@ -0,0 +1,11 @@ +--- config/BuildSystem/config/setCompilers.py.old 2010-09-07 21:41:32.693103846 +0200 ++++ config/BuildSystem/config/setCompilers.py 2010-09-07 21:41:45.322093881 +0200 +@@ -875,7 +875,7 @@ + languages.append('FC') + for language in languages: + self.pushLanguage(language) +- for testFlag in ['-PIC', '-fPIC', '-KPIC','-qpic']: ++ for testFlag in ['-fPIC', '-PIC', '-KPIC', '-qpic']: + try: + self.framework.logPrint('Trying '+language+' compiler flag '+testFlag) + if not self.checkLinkerFlag(testFlag): diff --git a/sci-mathematics/petsc/files/petsc-3.3-disable-env-warnings.patch b/sci-mathematics/petsc/files/petsc-3.3-disable-env-warnings.patch new file mode 100644 index 000000000..d2ee44e1d --- /dev/null +++ b/sci-mathematics/petsc/files/petsc-3.3-disable-env-warnings.patch @@ -0,0 +1,13 @@ +Index: petsc-3.2-p6/config/BuildSystem/config/setCompilers.py +=================================================================== +--- petsc-3.2-p6.orig/config/BuildSystem/config/setCompilers.py ++++ petsc-3.2-p6/config/BuildSystem/config/setCompilers.py +@@ -1463,7 +1463,7 @@ This way - mpi compilers from '''+self.a + 'LDFLAGS','LIBS','MPI_DIR'] + for envVal in ignoreEnv: + if envVal in os.environ: +- self.logPrintBox('***** WARNING: '+envVal+' found in enviornment variables - ignoring ******') ++ #self.logPrintBox('***** WARNING: '+envVal+' found in enviornment variables - ignoring ******') + del os.environ[envVal] + return + diff --git a/sci-mathematics/petsc/files/petsc-3.3-disable-rpath.patch b/sci-mathematics/petsc/files/petsc-3.3-disable-rpath.patch new file mode 100644 index 000000000..3c443b29f --- /dev/null +++ b/sci-mathematics/petsc/files/petsc-3.3-disable-rpath.patch @@ -0,0 +1,16 @@ +--- config/BuildSystem/config/setCompilers.py 2010-11-24 18:01:17.110124425 +0100 ++++ config/BuildSystem/config/setCompilers.py 2010-11-24 18:02:28.710104226 +0100 +@@ -1186,12 +1186,7 @@ + for language in languages: + flag = '-L' + self.pushLanguage(language) +- # test '-R' before '-rpath' as sun compilers [c,fortran] don't give proper errors with wrong options. +- if not Configure.isDarwin(): +- testFlags = ['-Wl,-rpath,', '-R','-rpath ' , '-Wl,-R,'] +- else: +- testFlags = [] +- # test '-R' before '-Wl,-rpath' for SUN compilers [as cc on linux accepts -Wl,-rpath, but f90 & CC do not. ++ testFlags = [] + if self.isSun(self.framework.getCompiler()): + testFlags.insert(0,'-R') + for testFlag in testFlags: diff --git a/sci-mathematics/petsc/files/petsc-3.3_p0-configure-pic.patch b/sci-mathematics/petsc/files/petsc-3.3_p0-configure-pic.patch deleted file mode 100644 index bbfdae1c8..000000000 --- a/sci-mathematics/petsc/files/petsc-3.3_p0-configure-pic.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- config/BuildSystem/config/setCompilers.py.old 2010-09-07 21:41:32.693103846 +0200 -+++ config/BuildSystem/config/setCompilers.py 2010-09-07 21:41:45.322093881 +0200 -@@ -875,7 +875,7 @@ - languages.append('FC') - for language in languages: - self.pushLanguage(language) -- for testFlag in ['-PIC', '-fPIC', '-KPIC','-qpic']: -+ for testFlag in ['-fPIC', '-PIC', '-KPIC', '-qpic']: - try: - self.framework.logPrint('Trying '+language+' compiler flag '+testFlag) - if not self.checkLinkerFlag(testFlag): diff --git a/sci-mathematics/petsc/files/petsc-3.3_p0-disable-env-warnings.patch b/sci-mathematics/petsc/files/petsc-3.3_p0-disable-env-warnings.patch deleted file mode 100644 index d2ee44e1d..000000000 --- a/sci-mathematics/petsc/files/petsc-3.3_p0-disable-env-warnings.patch +++ /dev/null @@ -1,13 +0,0 @@ -Index: petsc-3.2-p6/config/BuildSystem/config/setCompilers.py -=================================================================== ---- petsc-3.2-p6.orig/config/BuildSystem/config/setCompilers.py -+++ petsc-3.2-p6/config/BuildSystem/config/setCompilers.py -@@ -1463,7 +1463,7 @@ This way - mpi compilers from '''+self.a - 'LDFLAGS','LIBS','MPI_DIR'] - for envVal in ignoreEnv: - if envVal in os.environ: -- self.logPrintBox('***** WARNING: '+envVal+' found in enviornment variables - ignoring ******') -+ #self.logPrintBox('***** WARNING: '+envVal+' found in enviornment variables - ignoring ******') - del os.environ[envVal] - return - diff --git a/sci-mathematics/petsc/files/petsc-3.3_p0-disable-rpath.patch b/sci-mathematics/petsc/files/petsc-3.3_p0-disable-rpath.patch deleted file mode 100644 index 3c443b29f..000000000 --- a/sci-mathematics/petsc/files/petsc-3.3_p0-disable-rpath.patch +++ /dev/null @@ -1,16 +0,0 @@ ---- config/BuildSystem/config/setCompilers.py 2010-11-24 18:01:17.110124425 +0100 -+++ config/BuildSystem/config/setCompilers.py 2010-11-24 18:02:28.710104226 +0100 -@@ -1186,12 +1186,7 @@ - for language in languages: - flag = '-L' - self.pushLanguage(language) -- # test '-R' before '-rpath' as sun compilers [c,fortran] don't give proper errors with wrong options. -- if not Configure.isDarwin(): -- testFlags = ['-Wl,-rpath,', '-R','-rpath ' , '-Wl,-R,'] -- else: -- testFlags = [] -- # test '-R' before '-Wl,-rpath' for SUN compilers [as cc on linux accepts -Wl,-rpath, but f90 & CC do not. -+ testFlags = [] - if self.isSun(self.framework.getCompiler()): - testFlags.insert(0,'-R') - for testFlag in testFlags: diff --git a/sci-mathematics/petsc/petsc-3.3_p0.ebuild b/sci-mathematics/petsc/petsc-3.3_p0.ebuild deleted file mode 100644 index defd77c5d..000000000 --- a/sci-mathematics/petsc/petsc-3.3_p0.ebuild +++ /dev/null @@ -1,215 +0,0 @@ -# Copyright 1999-2012 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=4 - -inherit base flag-o-matic fortran-2 toolchain-funcs versionator - -MY_P="${PN}-$(replace_version_separator _ -)" - -DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation" -HOMEPAGE="http://www.mcs.anl.gov/petsc/" -SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz" - -LICENSE="petsc" -SLOT="0" -KEYWORDS="~x86 ~amd64" -IUSE="afterimage complex-scalars cxx debug doc - fortran hdf5 hypre mpi sparse superlu threads X" -# Failed: boost imagemagick metis - -# hypre and superlu curretly exclude each other due to missing linking to hypre -# if both are enabled -REQUIRED_USE=" - hypre? ( cxx mpi ) - hdf5? ( mpi ) - afterimage? ( X ) - ^^ ( hypre superlu ) -" -# imagemagick? ( X ) - -RDEPEND=" - virtual/blas - virtual/lapack - afterimage? ( media-libs/libafterimage ) - hdf5? ( sci-libs/hdf5[mpi?] ) - hypre? ( >=sci-libs/hypre-2.8.0b[mpi?] ) - mpi? ( virtual/mpi[cxx?,fortran?] ) - sparse? ( sci-libs/suitesparse >=sci-libs/cholmod-1.7.0 ) - superlu? ( sci-libs/superlu ) - X? ( x11-libs/libX11 ) -" -# boost? ( dev-libs/boost ) -# metis? ( sci-libs/parmetis ) -# imagemagick? ( media-gfx/imagemagick ) - -DEPEND="${RDEPEND} - virtual/fortran - dev-lang/python - dev-util/pkgconfig - dev-util/cmake -" -# cmake is used for parralel building -# in some configuration setups, legacy build is used (slow) - -S="${WORKDIR}/${MY_P}" - -PATCHES=( - "${FILESDIR}"/${P}-configure-pic.patch - "${FILESDIR}"/${P}-disable-env-warnings.patch - "${FILESDIR}"/${P}-disable-rpath.patch -) - -src_configure() { - # petsc uses --with-blah=1 and --with-blah=0 to en/disable options - petsc_enable() { - use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0" - } - # add external library: - # petsc_with use_flag libname libdir - # petsc_with use_flag libname include linking_libs - petsc_with() { - local myuse p=${2:-${1}} - if use ${1}; then - myuse="--with-${p}=1" - if [[ $# -ge 4 ]]; then - myuse="${myuse} --with-${p}-include=${3}" - shift 3 - myuse="${myuse} --with-${p}-lib=$@" - else - myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}" - fi - else - myuse="--with-${p}=0" - fi - echo ${myuse} - } - - # select between configure options depending on use flag - petsc_select() { - use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4" - } - - local mylang - local myopt - - use cxx && mylang="cxx" || mylang="c" - use debug && myopt="debug" || myopt="opt" - - # environmental variables expected by petsc during build - export PETSC_DIR="${S}" - export PETSC_ARCH="linux-gnu-${mylang}-${myopt}" - - if use debug; then - strip-flags - filter-flags -O* - fi - - # run petsc configure script - econf \ - CFLAGS="${CFLAGS}" \ - CXXFLAGS="${CXXFLAGS}" \ - LDFLAGS="${LDFLAGS}" \ - --with-shared-libraries \ - --with-single-library \ - --with-clanguage=${mylang} \ - $(petsc_enable cxx c-support) \ - --with-petsc-arch=${PETSC_ARCH} \ - --with-precision=double \ - --with-gnu-compilers \ - --with-blas-lapack-lib="$(pkg-config --libs lapack)" \ - $(petsc_enable debug debugging) \ - $(petsc_enable mpi) \ - $(petsc_select mpi cc mpicc $(tc-getCC)) \ - $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \ - $(petsc_enable fortran) \ - $(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \ - $(petsc_enable mpi mpi-compilers) \ - $(petsc_enable threads pthread) \ - $(petsc_enable threads pthreadclasses) \ - $(petsc_select complex-scalars scalar-type complex real) \ - --with-windows-graphics=0 \ - --with-matlab=0 \ - --with-cmake=cmake \ - $(petsc_with afterimage afterimage \ - /usr/include/libAfterImage -lAfterImage) \ - $(petsc_with hdf5) \ - $(petsc_with hypre hypre \ - /usr/include/hypre -lHYPRE) \ - $(petsc_with sparse cholmod) \ - $(petsc_with superlu superlu \ - /usr/include/superlu -lsuperlu) \ - $(petsc_with X x) \ - $(petsc_with X x11) \ - --with-imagemagick=0 \ - --with-python=0 \ - --with-scotch=0 - -# not yet tested: -# python bindings, sctotch, netcdf, scalapack -# non-working: -# fftw: no mpi-implementaion available in gentoo - -# failed dependencies, perhaps fixed in upstream soon: -# $(petsc_with metis parmetis) \ # needs metis too (>=5.0.2) -# $(petsc_with boost) \ -# $(petsc_with imagemagick imagemagick \ -# /usr/include/ImageMagick $(pkg-config --libs MagickCore)) \ -} - -src_install() { - # petsc install structure is very different from - # installing headers to /usr/include/petsc and lib to /usr/lib - # it also installs many unneeded executables and scripts - # so manual install is easier than cleanup after "emake install" - insinto /usr/include/${PN} - doins include/*.h* - insinto /usr/include/${PN}/${PETSC_ARCH}/include - doins ${PETSC_ARCH}/include/* - if use fortran; then - insinto /usr/include/${PN}/finclude - doins include/finclude/*.h - fi - if ! use mpi ; then - insinto /usr/include/${PN}/mpiuni - doins include/mpiuni/*.h - fi - insinto /usr/include/${PN}/conf - doins conf/{variables,rules,test} - insinto /usr/include/${PN}/${PETSC_ARCH}/conf - doins ${PETSC_ARCH}/conf/{petscrules,petscvariables,RDict.db} - insinto /usr/include/${PN}/petsc-private - doins include/petsc-private/*.h - - # fix configuration files: replace ${S} by installed location - sed -i \ - -e "s:${S}::g" \ - "${ED}"/usr/include/${PN}/${PETSC_ARCH}/include/petscconf.h \ - "${ED}"/usr/include/${PN}/${PETSC_ARCH}/conf/petscvariables || die - sed -i \ - -e "s:usr/lib:usr/$(get_libdir):g" \ - "${ED}"/usr/include/${PN}/${PETSC_ARCH}/include/petscconf.h || die - - # add information about installation directory and - # PETSC_ARCH to environmental variables - cat >> 99petsc <<- EOF - PETSC_ARCH=${PETSC_ARCH} - PETSC_DIR=${EPREFIX}/usr/include/${PN} - EOF - doenvd 99petsc - - dolib.so ${PETSC_ARCH}/lib/*.so - - if use doc ; then - einfo "installing documentation (this could take a while)" - dodoc docs/manual.pdf - dohtml -r docs/*.html docs/changes docs/manualpages - fi -} - -pkg_postinst() { - elog "The petsc ebuild is still under development." - elog "Help us improve the ebuild in:" - elog "http://bugs.gentoo.org/show_bug.cgi?id=53386" -} diff --git a/sci-mathematics/petsc/petsc-3.3_p1.ebuild b/sci-mathematics/petsc/petsc-3.3_p1.ebuild new file mode 100644 index 000000000..36e2d7aaf --- /dev/null +++ b/sci-mathematics/petsc/petsc-3.3_p1.ebuild @@ -0,0 +1,215 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=4 + +inherit base flag-o-matic fortran-2 toolchain-funcs versionator + +MY_P="${PN}-$(replace_version_separator _ -)" + +DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation" +HOMEPAGE="http://www.mcs.anl.gov/petsc/" +SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz" + +LICENSE="petsc" +SLOT="0" +KEYWORDS="~x86 ~amd64" +IUSE="afterimage complex-scalars cxx debug doc + fortran hdf5 hypre mpi sparse superlu threads X" +# Failed: boost imagemagick metis + +# hypre and superlu curretly exclude each other due to missing linking to hypre +# if both are enabled +REQUIRED_USE=" + hypre? ( cxx mpi ) + hdf5? ( mpi ) + afterimage? ( X ) + ^^ ( hypre superlu ) +" +# imagemagick? ( X ) + +RDEPEND=" + virtual/blas + virtual/lapack + afterimage? ( media-libs/libafterimage ) + hdf5? ( sci-libs/hdf5[mpi?] ) + hypre? ( >=sci-libs/hypre-2.8.0b[mpi?] ) + mpi? ( virtual/mpi[cxx?,fortran?] ) + sparse? ( sci-libs/suitesparse >=sci-libs/cholmod-1.7.0 ) + superlu? ( sci-libs/superlu ) + X? ( x11-libs/libX11 ) +" +# boost? ( dev-libs/boost ) +# metis? ( sci-libs/parmetis ) +# imagemagick? ( media-gfx/imagemagick ) + +DEPEND="${RDEPEND} + virtual/fortran + dev-lang/python + dev-util/pkgconfig + dev-util/cmake +" +# cmake is used for parralel building +# in some configuration setups, legacy build is used (slow) + +S="${WORKDIR}/${MY_P}" + +PATCHES=( + "${FILESDIR}"/${P%_*}-configure-pic.patch + "${FILESDIR}"/${P%_*}-disable-env-warnings.patch + "${FILESDIR}"/${P%_*}-disable-rpath.patch +) + +src_configure() { + # petsc uses --with-blah=1 and --with-blah=0 to en/disable options + petsc_enable() { + use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0" + } + # add external library: + # petsc_with use_flag libname libdir + # petsc_with use_flag libname include linking_libs + petsc_with() { + local myuse p=${2:-${1}} + if use ${1}; then + myuse="--with-${p}=1" + if [[ $# -ge 4 ]]; then + myuse="${myuse} --with-${p}-include=${3}" + shift 3 + myuse="${myuse} --with-${p}-lib=$@" + else + myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}" + fi + else + myuse="--with-${p}=0" + fi + echo ${myuse} + } + + # select between configure options depending on use flag + petsc_select() { + use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4" + } + + local mylang + local myopt + + use cxx && mylang="cxx" || mylang="c" + use debug && myopt="debug" || myopt="opt" + + # environmental variables expected by petsc during build + export PETSC_DIR="${S}" + export PETSC_ARCH="linux-gnu-${mylang}-${myopt}" + + if use debug; then + strip-flags + filter-flags -O* + fi + + # run petsc configure script + econf \ + CFLAGS="${CFLAGS}" \ + CXXFLAGS="${CXXFLAGS}" \ + LDFLAGS="${LDFLAGS}" \ + --with-shared-libraries \ + --with-single-library \ + --with-clanguage=${mylang} \ + $(petsc_enable cxx c-support) \ + --with-petsc-arch=${PETSC_ARCH} \ + --with-precision=double \ + --with-gnu-compilers \ + --with-blas-lapack-lib="$(pkg-config --libs lapack)" \ + $(petsc_enable debug debugging) \ + $(petsc_enable mpi) \ + $(petsc_select mpi cc mpicc $(tc-getCC)) \ + $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \ + $(petsc_enable fortran) \ + $(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \ + $(petsc_enable mpi mpi-compilers) \ + $(petsc_enable threads pthread) \ + $(petsc_enable threads pthreadclasses) \ + $(petsc_select complex-scalars scalar-type complex real) \ + --with-windows-graphics=0 \ + --with-matlab=0 \ + --with-cmake=cmake \ + $(petsc_with afterimage afterimage \ + /usr/include/libAfterImage -lAfterImage) \ + $(petsc_with hdf5) \ + $(petsc_with hypre hypre \ + /usr/include/hypre -lHYPRE) \ + $(petsc_with sparse cholmod) \ + $(petsc_with superlu superlu \ + /usr/include/superlu -lsuperlu) \ + $(petsc_with X x) \ + $(petsc_with X x11) \ + --with-imagemagick=0 \ + --with-python=0 \ + --with-scotch=0 + +# not yet tested: +# python bindings, sctotch, netcdf, scalapack +# non-working: +# fftw: no mpi-implementaion available in gentoo + +# failed dependencies, perhaps fixed in upstream soon: +# $(petsc_with metis parmetis) \ # needs metis too (>=5.0.2) +# $(petsc_with boost) \ +# $(petsc_with imagemagick imagemagick \ +# /usr/include/ImageMagick $(pkg-config --libs MagickCore)) \ +} + +src_install() { + # petsc install structure is very different from + # installing headers to /usr/include/petsc and lib to /usr/lib + # it also installs many unneeded executables and scripts + # so manual install is easier than cleanup after "emake install" + insinto /usr/include/${PN} + doins include/*.h* + insinto /usr/include/${PN}/${PETSC_ARCH}/include + doins ${PETSC_ARCH}/include/* + if use fortran; then + insinto /usr/include/${PN}/finclude + doins include/finclude/*.h + fi + if ! use mpi ; then + insinto /usr/include/${PN}/mpiuni + doins include/mpiuni/*.h + fi + insinto /usr/include/${PN}/conf + doins conf/{variables,rules,test} + insinto /usr/include/${PN}/${PETSC_ARCH}/conf + doins ${PETSC_ARCH}/conf/{petscrules,petscvariables,RDict.db} + insinto /usr/include/${PN}/petsc-private + doins include/petsc-private/*.h + + # fix configuration files: replace ${S} by installed location + sed -i \ + -e "s:${S}::g" \ + "${ED}"/usr/include/${PN}/${PETSC_ARCH}/include/petscconf.h \ + "${ED}"/usr/include/${PN}/${PETSC_ARCH}/conf/petscvariables || die + sed -i \ + -e "s:usr/lib:usr/$(get_libdir):g" \ + "${ED}"/usr/include/${PN}/${PETSC_ARCH}/include/petscconf.h || die + + # add information about installation directory and + # PETSC_ARCH to environmental variables + cat >> 99petsc <<- EOF + PETSC_ARCH=${PETSC_ARCH} + PETSC_DIR=${EPREFIX}/usr/include/${PN} + EOF + doenvd 99petsc + + dolib.so ${PETSC_ARCH}/lib/*.so + + if use doc ; then + einfo "installing documentation (this could take a while)" + dodoc docs/manual.pdf + dohtml -r docs/*.html docs/changes docs/manualpages + fi +} + +pkg_postinst() { + elog "The petsc ebuild is still under development." + elog "Help us improve the ebuild in:" + elog "http://bugs.gentoo.org/show_bug.cgi?id=53386" +} -- cgit v1.2.3-65-gdbad