####################################################################
#
# When you add an entry to the top of this file, add your name, the date, and
# an explanation of why something is getting masked. Please be extremely
# careful not to commit atoms that are not valid, as it can cause large-scale
# breakage, especially if it ends up in the daily snapshot.
#
## Example:
##
## # Dev E. Loper <developer@gentoo.org> (28 Jun 2012)
## # Masking  these versions until we can get the
## # v4l stuff to work properly again
## =media-video/mplayer-0.90_pre5
## =media-video/mplayer-0.90_pre5-r1
#
# - Best last rites (removal) practices -
# Include the following info:
# a) reason for masking
# b) bug # for the removal (and yes you should have one)
# c) date of removal (either the date or "in x days")
# d) the word "removal"
#
## Example:
##
## Dev E. Loper <developer@gentoo.org> (25 Jan 2012)
## Masked for removal in 30 days.  Doesn't work
## with new libfoo. Upstream dead, gtk-1, smells
## funny. (bug #987654)
## app-misc/some-package

#--- END OF EXAMPLES ---

# Live ebuilds go here
# keep this on top
>=media-gfx/brlcad-9999
>=dev-lang/path64-9999
>=dev-lang/julia-9999
>=dev-lang/ispc-9999
>=app-benchmarks/btl-9999
>=sci-chemistry/freeon-9999
>=sci-astronomy/eye-9999
>=sci-astronomy/missfits-9999
>=sci-astronomy/psfex-9999
>=sci-astronomy/scamp-9999
>=sci-astronomy/sextractor-9999
>=sci-astronomy/skymaker-9999
>=sci-astronomy/stiff-9999
>=sci-astronomy/stuff-9999
>=sci-astronomy/swarp-9999
>=sci-astronomy/weightwatcher-9999
>=dev-lang/ispc-9999
>=media-gfx/librecad-9999
>=media-gfx/brlcad-9999
>=dev-lang/path64-9999
>=sys-cluster/nullmpi-9999
>=sci-physics/espresso-9999
>=sci-physics/espresso++-9999
>=sci-chemistry/gromacs-4.5.9999
>=sci-chemistry/gromacs-4.6.9999
>=sci-chemistry/gromacs-9999
>=sci-libs/votca-tools-9999
>=sci-chemistry/votca-csg-9999
>=sci-chemistry/votca-csgapps-9999
~sci-visualization/gnuplot-4.6.9999
~sci-visualization/gnuplot-4.7.9999
~sci-chemistry/burrow-owl-9999_pre15
>=sci-chemistry/pymol-apbs-plugin-9999
>=sci-chemistry/coot-9999
>=sci-chemistry/pymol-9999

# Honza Macháček <Hloupy.Honza@centrum.cz> (17 June 2013)
# bigdft moved from sci-libs to sci-physics
# sci-physics/abinit now uses sci-libs/bigdft-abi instead
# sci-libs/bigdft should be deleted in 30 days
sci-libs/bigdft

# Justin Lecher <jlec@gentoo.org> (03 March 2013)
# Missing deps
sci-biology/gbrowse
sci-mathematics/surfer
dev-python/pymvpa
sci-biology/artemis-bin

# Justin Lecher <jlec@gentoo.org> (28 Apr 2012)
# Doesn't install pkg-config files, which many packages rely on
=sci-libs/mmdb-1.24.20111208

# Sebasien Fabbro <bicatali@gentoo.org> (10 Mar 2012)
# incompatible API with previous versions of metis (4)
# masked until reverse depedencies are fixed
>=sci-libs/parmetis-4

# Justin Lecher <jlec@gentoo.org> (20 Feb 2012)
# They are broken in one or the other way
# Need to be bumped to emboss-6.4.0
sci-biology/emboss
sci-biology/embassy
sci-biology/embassy-cbstools
sci-biology/embassy-domainatrix
sci-biology/embassy-domalign
sci-biology/embassy-domsearch
sci-biology/embassy-emnu
sci-biology/embassy-esim4
sci-biology/embassy-hmmer
sci-biology/embassy-iprscan
sci-biology/embassy-memenew
sci-biology/embassy-mira
sci-biology/embassy-mse
sci-biology/embassy-phylipnew
sci-biology/embassy-signature
sci-biology/embassy-structure
sci-biology/embassy-topo
sci-biology/embassy-vienna
sci-biology/embassy-clustalomega

# Justin Lecher <jlec@gentoo.org> (24 Jun 2011)
# paraview dep is masked
sci-visualization/vtkPOFFReader

# Sebastien Fabbro <bicatali@gentoo.org> (23 Aug 2011)
# mask old blas from main tree to allow smoother transition to 
# new blas/lapack framework
=sci-libs/blas-reference-20070226*

# Francois Bissey (kiwifb) (29 Oct 2010)
# f.r.bissey@massey.ac.nz
# mask paraview-3.8.* as there are no stable versions in the tree
# Avoid accidental upgrade
>=sci-visualization/paraview-3.8.0

# Justin Lecher <jlec@gentoo.org> (11 May 2009)
# work in progress 
=sci-chemistry/almost-1.0.3-r1