.../align/contig_assembly/Makefile.xalgocontig_assembly.lib | 2 ++ src/algo/align/ngalign/Makefile.xngalign.lib | 2 ++ src/algo/align/nw/Makefile.xalgoalignnw.lib | 2 ++ src/algo/align/prosplign/Makefile.prosplign.lib | 2 ++ src/algo/align/splign/Makefile.xalgoalignsplign.lib | 2 ++ src/algo/blast/api/Makefile.xblast.lib | 2 +- src/algo/blast/blastinput/Makefile.blastinput.lib | 2 +- src/algo/blast/core/Makefile.blast.lib | 2 ++ src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib | 2 ++ .../dbindex_search/Makefile.xalgoblastdbindex_search.lib | 2 ++ src/algo/blast/format/Makefile.xblastformat.lib | 2 +- src/algo/blast/gumbel_params/Makefile.gumbelparams.lib | 1 + src/algo/cobalt/Makefile.cobalt.lib | 2 ++ src/algo/dustmask/Makefile.xalgodustmask.lib | 1 + src/algo/gnomon/Makefile.gnomon.lib | 2 +- src/algo/ms/formats/pepxml/Makefile.pepXML.lib | 2 ++ src/algo/ms/omssa/Makefile.xomssa.lib | 2 ++ src/algo/phy_tree/Makefile.xalgophytree.lib | 2 +- src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib | 2 ++ src/algo/segmask/Makefile.xalgosegmask.lib | 1 + src/algo/seqqa/Makefile.xalgoseqqa.lib | 2 ++ src/algo/sequence/Makefile.xalgoseq.lib | 2 ++ src/algo/structure/bma_refine/Makefile.xbma_refiner.lib | 3 +++ src/algo/structure/cd_utils/Makefile.xcd_utils.lib | 2 +- src/algo/structure/struct_dp/Makefile.xstruct_dp.lib | 2 ++ src/algo/structure/struct_util/Makefile.xstruct_util.lib | 2 ++ src/algo/structure/threader/Makefile.xstruct_thread.lib | 2 ++ src/algo/text/Makefile.xalgotext.lib | 2 ++ src/algo/volume_merge/Makefile.xalgovmerge.lib | 2 ++ src/algo/winmask/Makefile.xalgowinmask.lib | 2 ++ src/cgi/Makefile.cgi.lib | 2 ++ src/cgi/Makefile.fcgi.lib | 2 ++ src/connect/Makefile.connssl.lib | 2 ++ src/connect/Makefile.xconnect.lib | 4 ++++ src/connect/Makefile.xthrserv.lib | 2 +- src/connect/Makefile.xxconnect.lib | 2 ++ src/connect/services/Makefile.ncbi_xcache_netcache.lib | 2 +- src/connect/services/Makefile.xconnserv.lib | 2 +- src/corelib/Makefile.test_boost.lib | 2 ++ src/corelib/Makefile.test_mt.lib | 2 ++ src/corelib/test/Makefile.pbacktest.lib | 2 ++ src/db/bdb/Makefile.bdb.lib | 4 ++++ src/db/bdb/Makefile.ncbi_xcache_bdb.lib | 2 +- src/db/sqlite/Makefile.sqlitewrapp.lib | 3 +++ src/dbapi/Makefile.dbapi.lib | 5 +++++ src/dbapi/driver/Makefile.dbapi_driver.lib | 2 ++ src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib | 2 ++ src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib | 2 +- src/dbapi/simple/Makefile.sdbapi.lib | 11 +++++++++++ src/html/Makefile.html.lib | 2 ++ src/misc/cgi_redirect/Makefile.cgi_redirect.lib | 2 ++ src/misc/grid_cgi/Makefile.xgridcgi.lib | 2 ++ src/objects/access/Makefile.access.lib | 1 + src/objects/biblio/Makefile.biblio.lib | 2 ++ src/objects/biotree/Makefile.biotree.lib | 2 ++ src/objects/blast/Makefile.blast.lib | 2 ++ src/objects/blast/Makefile.xnetblastcli.lib | 2 ++ src/objects/blastdb/Makefile.blastdb.lib | 2 ++ src/objects/blastxml/Makefile.blastxml.lib | 2 ++ src/objects/cdd/Makefile.cdd.lib | 2 ++ src/objects/cn3d/Makefile.cn3d.lib | 2 ++ src/objects/docsum/Makefile.docsum.lib | 2 ++ src/objects/entrez2/Makefile.entrez2.lib | 2 ++ src/objects/entrez2/Makefile.entrez2cli.lib | 2 ++ src/objects/entrezgene/Makefile.entrezgene.lib | 2 ++ src/objects/featdef/Makefile.featdef.lib | 2 ++ src/objects/gbseq/Makefile.gbseq.lib | 2 ++ src/objects/general/Makefile.general.lib | 2 ++ src/objects/genomecoll/Makefile.genome_collection.lib | 2 ++ src/objects/homologene/Makefile.homologene.lib | 2 ++ src/objects/id1/Makefile.id1.lib | 2 ++ src/objects/id1/Makefile.id1cli.lib | 2 ++ src/objects/id2/Makefile.id2.lib | 2 ++ src/objects/id2/Makefile.id2cli.lib | 2 ++ src/objects/insdseq/Makefile.insdseq.lib | 2 ++ src/objects/macro/Makefile.macro.lib | 2 ++ src/objects/medlars/Makefile.medlars.lib | 2 ++ src/objects/medline/Makefile.medline.lib | 2 ++ src/objects/mim/Makefile.mim.lib | 2 ++ src/objects/mla/Makefile.mla.lib | 2 ++ src/objects/mla/Makefile.mlacli.lib | 2 ++ src/objects/mmdb/Makefile.mmdb.lib | 2 ++ src/objects/ncbimime/Makefile.ncbimime.lib | 2 ++ src/objects/objprt/Makefile.objprt.lib | 2 ++ src/objects/omssa/Makefile.omssa.lib | 2 ++ src/objects/pcassay/Makefile.pcassay.lib | 2 ++ src/objects/pcsubstance/Makefile.pcsubstance.lib | 2 ++ src/objects/proj/Makefile.proj.lib | 2 ++ src/objects/pub/Makefile.pub.lib | 2 ++ src/objects/pubmed/Makefile.pubmed.lib | 2 ++ src/objects/remap/Makefile.remap.lib | 2 ++ src/objects/remap/Makefile.remapcli.lib | 2 ++ src/objects/scoremat/Makefile.scoremat.lib | 2 ++ src/objects/seq/Makefile.seq.lib | 2 ++ src/objects/seqcode/Makefile.seqcode.lib | 2 ++ src/objects/seqedit/Makefile.seqedit.lib | 1 + src/objects/seqset/Makefile.seqset.lib | 1 + src/objects/seqsplit/Makefile.seqsplit.lib | 2 ++ src/objects/seqtest/Makefile.seqtest.lib | 2 ++ src/objects/submit/Makefile.submit.lib | 1 + src/objects/taxon1/Makefile.taxon1.lib | 2 ++ src/objects/taxon3/Makefile.taxon3.lib | 2 ++ src/objects/tinyseq/Makefile.tinyseq.lib | 2 ++ src/objects/valerr/Makefile.valerr.lib | 2 ++ src/objects/valid/Makefile.valid.lib | 2 ++ src/objects/variation/Makefile.variation.lib | 1 + src/objmgr/split/Makefile.id2_split.lib | 2 +- src/objmgr/util/Makefile.util.lib | 1 + src/objtools/align/Makefile.xalntool.lib | 2 ++ src/objtools/align_format/Makefile.align_format.lib | 2 ++ src/objtools/alnmgr/Makefile.alnmgr.lib | 1 + src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib | 2 ++ src/objtools/blast/gene_info_reader/Makefile.gene_info.lib | 2 ++ .../blast/gene_info_writer/Makefile.gene_info_writer.lib | 2 ++ src/objtools/blast/seqdb_reader/Makefile.seqdb.lib | 2 ++ src/objtools/blast/seqdb_writer/Makefile.writedb.lib | 2 ++ src/objtools/blast/services/Makefile.blast_services.lib | 1 + src/objtools/cddalignview/Makefile.cddalignview.lib | 2 ++ src/objtools/cleanup/Makefile.cleanup.lib | 2 +- .../data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib | 3 +++ .../blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib | 2 ++ src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib | 2 ++ src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib | 2 +- .../data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib | 2 ++ .../data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib | 2 ++ src/objtools/data_loaders/trace/Makefile.xloader_trace.lib | 2 ++ src/objtools/edit/Makefile.edit.lib | 2 ++ src/objtools/eutils/api/Makefile.eutils.lib | 2 ++ src/objtools/eutils/egquery/Makefile.egquery.lib | 2 ++ src/objtools/eutils/ehistory/Makefile.ehistory.lib | 2 ++ src/objtools/eutils/einfo/Makefile.einfo.lib | 2 ++ src/objtools/eutils/elink/Makefile.elink.lib | 2 ++ src/objtools/eutils/epost/Makefile.epost.lib | 2 ++ src/objtools/eutils/esearch/Makefile.esearch.lib | 2 ++ src/objtools/eutils/espell/Makefile.espell.lib | 2 ++ src/objtools/eutils/esummary/Makefile.esummary.lib | 2 ++ src/objtools/eutils/linkout/Makefile.linkout.lib | 2 ++ src/objtools/eutils/uilist/Makefile.uilist.lib | 2 ++ src/objtools/format/Makefile.xformat.lib | 2 ++ src/objtools/lds/Makefile.lds.lib | 2 +- src/objtools/manip/Makefile.xobjmanip.lib | 2 ++ src/objtools/readers/Makefile.xobjread.lib | 3 +-- src/objtools/readers/Makefile.xobjreadex.lib | 2 +- src/objtools/seqmasks_io/Makefile.seqmasks_io.lib | 2 +- src/objtools/simple/Makefile.xobjsimple.lib | 1 + src/objtools/snputil/Makefile.snputil.lib | 2 ++ src/objtools/validator/Makefile.validator.lib | 2 ++ src/objtools/writers/Makefile.xobjwrite.lib | 1 + src/sample/app/asn/Makefile.sample_asn.lib | 2 ++ src/sample/app/soap/Makefile.soap_dataobj.lib | 2 ++ src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib | 2 ++ src/sample/lib/basic/Makefile.basic_sample_lib.lib | 2 ++ src/sample/lib/dtd/Makefile.dtd_sample_lib.lib | 2 ++ src/sample/lib/xsd/Makefile.xsd_sample_lib.lib | 2 ++ src/serial/Makefile.serial.lib | 2 ++ src/serial/soap/Makefile.soap.lib | 2 ++ src/serial/soap/Makefile.soap_server.lib | 2 ++ src/serial/test/Makefile.we_cpp.lib | 1 + src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib | 2 +- src/sra/sdk/libs/align/Makefile.align-writer.lib | 2 +- src/util/Makefile.util.lib | 2 ++ src/util/compress/api/Makefile.compress.lib | 2 +- src/util/qparse/Makefile.xqueryparse.lib | 2 ++ src/util/regexp/Makefile.regexp.lib | 2 ++ src/util/sequtil/Makefile.sequtil.lib | 2 ++ src/util/xregexp/Makefile.xregexp.lib | 2 +- 166 files changed, 315 insertions(+), 23 deletions(-) diff --git a/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib b/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib index c8851d8..35ae629 100644 --- a/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib +++ b/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib @@ -10,3 +10,5 @@ LIB = xalgocontig_assembly CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = align_format blastinput dbapi_driver seq xalgoalignnw xalgodustmask xalnmgr xblast xncbi xobjmgr xobjutil xser # axf diff --git a/src/algo/align/ngalign/Makefile.xngalign.lib b/src/algo/align/ngalign/Makefile.xngalign.lib index d163f7c..ade88ce 100644 --- a/src/algo/align/ngalign/Makefile.xngalign.lib +++ b/src/algo/align/ngalign/Makefile.xngalign.lib @@ -15,3 +15,5 @@ LIB = xngalign CXXFLAGS = $(FAST_CXXFLAGS) -I./. LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = seq xalgoalignutil xncbi blastinput xalgoalignnw align_format xcgi ncbi_xloader_genbank ncbi_xreader ncbi_xreader_id2 diff --git a/src/algo/align/nw/Makefile.xalgoalignnw.lib b/src/algo/align/nw/Makefile.xalgoalignnw.lib index acc1ddf..acba81c 100644 --- a/src/algo/align/nw/Makefile.xalgoalignnw.lib +++ b/src/algo/align/nw/Makefile.xalgoalignnw.lib @@ -15,3 +15,5 @@ CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) WATCHERS = kiryutin + +DLL_LIB = access align_format dbapi_driver general seq writedb xncbi xser # axf diff --git a/src/algo/align/prosplign/Makefile.prosplign.lib b/src/algo/align/prosplign/Makefile.prosplign.lib index 248ee37..73143ad 100644 --- a/src/algo/align/prosplign/Makefile.prosplign.lib +++ b/src/algo/align/prosplign/Makefile.prosplign.lib @@ -10,3 +10,5 @@ LIB = prosplign CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = align_format blastinput dbapi_driver general igblast seq xalgoalignutil xalnmgr xncbi xobjmgr xobjutil xser # axf diff --git a/src/algo/align/splign/Makefile.xalgoalignsplign.lib b/src/algo/align/splign/Makefile.xalgoalignsplign.lib index 077f111..dff1877 100644 --- a/src/algo/align/splign/Makefile.xalgoalignsplign.lib +++ b/src/algo/align/splign/Makefile.xalgoalignsplign.lib @@ -10,3 +10,5 @@ LIB = xalgoalignsplign CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = access align_format blastinput dbapi_driver gene_info general seq seqdb xalgoalignnw xalgoalignutil xalgoseq xblast xncbi xobjmgr xobjutil xser xutil # axf prosplign diff --git a/src/algo/blast/api/Makefile.xblast.lib b/src/algo/blast/api/Makefile.xblast.lib index 4e424b3..8708bf0 100644 --- a/src/algo/blast/api/Makefile.xblast.lib +++ b/src/algo/blast/api/Makefile.xblast.lib @@ -81,7 +81,7 @@ LIB = xblast DLL_LIB = xalgoblastdbindex composition_adjustment xalgowinmask \ xalgodustmask seqmasks_io seqdb $(OBJREAD_LIBS) xobjutil \ blastdb xnetblastcli xnetblast scoremat xconnect tables \ - $(SOBJMGR_LIBS) + $(SOBJMGR_LIBS) seqdb xnetblast xnetblastcli xalgoblastdbindex xalgowinmask tables composition_adjustment xobjread CFLAGS = $(FAST_CFLAGS) CPPFLAGS = -DNCBI_MODULE=BLAST $(ORIG_CPPFLAGS) diff --git a/src/algo/blast/blastinput/Makefile.blastinput.lib b/src/algo/blast/blastinput/Makefile.blastinput.lib index 372dba1..d5986c7 100644 --- a/src/algo/blast/blastinput/Makefile.blastinput.lib +++ b/src/algo/blast/blastinput/Makefile.blastinput.lib @@ -24,7 +24,7 @@ SRC = $(SRC_CXX) LIB = blastinput -DLL_LIB = xblast align_format ncbi_xloader_blastdb_rmt ncbi_xloader_blastdb seqdb $(OBJREAD_LIBS) $(OBJMGR_LIBS) xutil +DLL_LIB = seqdb ncbi_xloader_blastdb ncbi_xloader_blastdb_rmt align_format xalnmgr xblast align_format ncbi_xloader_blastdb_rmt ncbi_xloader_blastdb seqdb $(OBJREAD_LIBS) xcgi xobjread xobjutil ncbi_xloader_genbank ncbi_xreader ncbi_xreader_id2 xalnmgr xcgi xutil # should be redundant, given the above :-/ ASN_DEP = seqset xnetblast diff --git a/src/algo/blast/core/Makefile.blast.lib b/src/algo/blast/core/Makefile.blast.lib index 8e889a7..1326aee 100644 --- a/src/algo/blast/core/Makefile.blast.lib +++ b/src/algo/blast/core/Makefile.blast.lib @@ -23,3 +23,5 @@ LDFLAGS = $(FAST_LDFLAGS) WATCHERS = coulouri maning madden camacho + +DLL_LIB = xutil diff --git a/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib b/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib index fcfb9f9..0e762b4 100644 --- a/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib +++ b/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib @@ -14,3 +14,5 @@ LDFLAGS = $(FAST_LDFLAGS) ASN_DEP = seqset WATCHERS = morgulis + +DLL_LIB = dbapi_driver seq seqdb seqset xncbi xobjmgr xobjread xobjutil xser xutil # axf diff --git a/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib b/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib index e64f111..475f4a1 100644 --- a/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib +++ b/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib @@ -10,3 +10,5 @@ LDFLAGS = $(FAST_LDFLAGS) ASN_DEP = seqset WATCHERS = morgulis + +DLL_LIB = dbapi_driver xncbi xobjmgr # axf diff --git a/src/algo/blast/format/Makefile.xblastformat.lib b/src/algo/blast/format/Makefile.xblastformat.lib index 3058881..7a6d07d 100644 --- a/src/algo/blast/format/Makefile.xblastformat.lib +++ b/src/algo/blast/format/Makefile.xblastformat.lib @@ -7,6 +7,6 @@ SRC = blastfmtutil blastxml_format blast_format data4xmlformat build_archive vec CPPFLAGS = -DNCBI_MODULE=BLASTFORMAT $(ORIG_CPPFLAGS) -DLL_LIB = align_format blastxml xhtml xcgi +DLL_LIB = align_format blastxml xhtml xcgi align_format general scoremat seq seqdb xalnmgr xblast xnetblast xobjmgr xobjutil blast_services ncbi_xloader_genbank xcgi # cobalt WATCHERS = jianye zaretska madden camacho fongah2 diff --git a/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib b/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib index 316d4fa..844de85 100644 --- a/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib +++ b/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib @@ -11,3 +11,4 @@ LDFLAGS = $(FAST_LDFLAGS) WATCHERS = boratyng madden camacho +DLL_LIB = dbapi_driver xncbi xutil # axf diff --git a/src/algo/cobalt/Makefile.cobalt.lib b/src/algo/cobalt/Makefile.cobalt.lib index e618f67..b406cc5 100644 --- a/src/algo/cobalt/Makefile.cobalt.lib +++ b/src/algo/cobalt/Makefile.cobalt.lib @@ -14,3 +14,5 @@ ASN_DEP = seq seqset biotree xnetblast blastdb CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = align_format dbapi_driver general igblast seq seqdb seqset xalgoalignnw xalgophytree xblast xncbi xnetblast xobjmgr xobjutil xser fastme # axf diff --git a/src/algo/dustmask/Makefile.xalgodustmask.lib b/src/algo/dustmask/Makefile.xalgodustmask.lib index 84e2568..3632356 100644 --- a/src/algo/dustmask/Makefile.xalgodustmask.lib +++ b/src/algo/dustmask/Makefile.xalgodustmask.lib @@ -11,3 +11,4 @@ SRC = symdust CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) +DLL_LIB = dbapi_driver seq xncbi xobjmgr # axf diff --git a/src/algo/gnomon/Makefile.gnomon.lib b/src/algo/gnomon/Makefile.gnomon.lib index 2a06ee8..d73cd8f 100644 --- a/src/algo/gnomon/Makefile.gnomon.lib +++ b/src/algo/gnomon/Makefile.gnomon.lib @@ -6,7 +6,7 @@ SRC = $(ASN:%=%__) $(ASN:%=%___) \ gnomon_engine gnomon_objmgr score gnomon_model parse hmm gnomon_seq asn1 chainer id_handler \ annot select_alignments_alt aligncollapser LIB = xalgognomon -DLL_LIB = xobjutil $(SOBJMGR_LIBS) +DLL_LIB = xobjutil $(SOBJMGR_LIBS) xalgoseq CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) diff --git a/src/algo/ms/formats/pepxml/Makefile.pepXML.lib b/src/algo/ms/formats/pepxml/Makefile.pepXML.lib index 686dd70..98f57b2 100644 --- a/src/algo/ms/formats/pepxml/Makefile.pepXML.lib +++ b/src/algo/ms/formats/pepxml/Makefile.pepXML.lib @@ -2,3 +2,5 @@ WATCHERS = lewisg slottad LIB = pepXML SRC = pepXML__ pepXML___ + +DLL_LIB = access align_format dbapi_driver xncbi xser # axf diff --git a/src/algo/ms/omssa/Makefile.xomssa.lib b/src/algo/ms/omssa/Makefile.xomssa.lib index 872b92e..78261eb 100644 --- a/src/algo/ms/omssa/Makefile.xomssa.lib +++ b/src/algo/ms/omssa/Makefile.xomssa.lib @@ -19,3 +19,5 @@ LIB = xomssa CFLAGS = $(FAST_CFLAGS) CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = xutil omssa pepXML xcompress xconnect seqdb blast xregexp diff --git a/src/algo/phy_tree/Makefile.xalgophytree.lib b/src/algo/phy_tree/Makefile.xalgophytree.lib index c7e2778..51ebe9d 100644 --- a/src/algo/phy_tree/Makefile.xalgophytree.lib +++ b/src/algo/phy_tree/Makefile.xalgophytree.lib @@ -6,7 +6,7 @@ ASN_DEP = biotree seqset SRC = bio_tree phy_node dist_methods lex.newick newick.tab tree_to_dist_mat phytree_calc LIB = xalgophytree -DLL_LIB = biotree +DLL_LIB = biotree seq xalnmgr xobjutil # fastme # The -I flag is necessary because filenames in #line directives throw # off some compilers (GCC 2.95 at least). :-/ diff --git a/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib b/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib index 15d7440..fab9207 100644 --- a/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib +++ b/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib @@ -10,3 +10,5 @@ CPPFLAGS = $(ORIG_CPPFLAGS) ASN_DEP = biotree seqset taxon1 WATCHERS = boratyng + +DLL_LIB = access align_format biotree dbapi_driver fastme gene_info seq taxon1 xalgophytree xncbi xobjmgr xobjutil xser # axf diff --git a/src/algo/segmask/Makefile.xalgosegmask.lib b/src/algo/segmask/Makefile.xalgosegmask.lib index bd011c1..97281ec 100644 --- a/src/algo/segmask/Makefile.xalgosegmask.lib +++ b/src/algo/segmask/Makefile.xalgosegmask.lib @@ -11,3 +11,4 @@ SRC = segmask CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) +DLL_LIB = align_format xobjmgr diff --git a/src/algo/seqqa/Makefile.xalgoseqqa.lib b/src/algo/seqqa/Makefile.xalgoseqqa.lib index b1bea47..a0e5b1b 100644 --- a/src/algo/seqqa/Makefile.xalgoseqqa.lib +++ b/src/algo/seqqa/Makefile.xalgoseqqa.lib @@ -12,3 +12,5 @@ LIB = xalgoseqqa CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) CPPFLAGS = $(ORIG_CPPFLAGS) $(PCRE_INCLUDE) + +DLL_LIB = access align_format dbapi_driver entrez2cli gene_info general seq seqtest xalgognomon xalgoseq xalnmgr xncbi xobjmgr xobjutil xser # axf diff --git a/src/algo/sequence/Makefile.xalgoseq.lib b/src/algo/sequence/Makefile.xalgoseq.lib index 70d42a1..ab7b80f 100644 --- a/src/algo/sequence/Makefile.xalgoseq.lib +++ b/src/algo/sequence/Makefile.xalgoseq.lib @@ -13,3 +13,5 @@ LDFLAGS = $(FAST_LDFLAGS) CPPFLAGS = $(ORIG_CPPFLAGS) $(PCRE_INCLUDE) WATCHERS = dicuccio + +DLL_LIB = taxon1 xalnmgr xregexp align_format seqset xobjmgr xobjutil diff --git a/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib b/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib index 5562f82..68d3a87 100644 --- a/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib +++ b/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib @@ -24,3 +24,6 @@ SRC = RowSelector \ RefinerTrial \ RefinerEngine \ Interface + +DLL_LIB = blastinput cdd ncbi_xcache_bdb xcd_utils xncbi xser xutil + diff --git a/src/algo/structure/cd_utils/Makefile.xcd_utils.lib b/src/algo/structure/cd_utils/Makefile.xcd_utils.lib index eda71f8..8d3a96a 100644 --- a/src/algo/structure/cd_utils/Makefile.xcd_utils.lib +++ b/src/algo/structure/cd_utils/Makefile.xcd_utils.lib @@ -68,6 +68,6 @@ SRC = \ cuTaxTree \ cuUtils -DLL_LIB = xobjread +DLL_LIB = xobjread blastdb blast_services cdd entrez2cli id1cli mmdb ncbimime scoremat taxon1 xblast xobjmgr xregexp CPPFLAGS = $(ORIG_CPPFLAGS) diff --git a/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib b/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib index 676a8dd..3d3e4c9 100644 --- a/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib +++ b/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib @@ -9,3 +9,5 @@ WATCHERS = thiessen SRC = block_align LIB = xstruct_dp + +DLL_LIB = xncbi diff --git a/src/algo/structure/struct_util/Makefile.xstruct_util.lib b/src/algo/structure/struct_util/Makefile.xstruct_util.lib index 5a38c7d..35d7077 100644 --- a/src/algo/structure/struct_util/Makefile.xstruct_util.lib +++ b/src/algo/structure/struct_util/Makefile.xstruct_util.lib @@ -17,3 +17,5 @@ SRC = aaa_dummy_pch \ su_block_multiple_alignment \ su_pssm \ su_sequence_set + +DLL_LIB = seqset seq xncbi scoremat xstruct_dp xblast diff --git a/src/algo/structure/threader/Makefile.xstruct_thread.lib b/src/algo/structure/threader/Makefile.xstruct_thread.lib index c06a2c0..9f1ff25 100644 --- a/src/algo/structure/threader/Makefile.xstruct_thread.lib +++ b/src/algo/structure/threader/Makefile.xstruct_thread.lib @@ -10,3 +10,5 @@ SRC = thrdalgs thrdatd thrdbwfi thrdcpal thrdcpll thrdcprl \ thrdttbi thrdzsc LIB = xstruct_thread + +DLL_LIB = xutil diff --git a/src/algo/text/Makefile.xalgotext.lib b/src/algo/text/Makefile.xalgotext.lib index 7c0b48a..ba055ad 100644 --- a/src/algo/text/Makefile.xalgotext.lib +++ b/src/algo/text/Makefile.xalgotext.lib @@ -8,3 +8,5 @@ SRC = text_util vector_serial CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = align_format blastinput ncbi_xcache_bdb xcompress xncbi xutil # axf diff --git a/src/algo/volume_merge/Makefile.xalgovmerge.lib b/src/algo/volume_merge/Makefile.xalgovmerge.lib index 499861a..3ffb80b 100644 --- a/src/algo/volume_merge/Makefile.xalgovmerge.lib +++ b/src/algo/volume_merge/Makefile.xalgovmerge.lib @@ -10,3 +10,5 @@ SRC = volume_merge CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) + +DLL_LIB = xncbi diff --git a/src/algo/winmask/Makefile.xalgowinmask.lib b/src/algo/winmask/Makefile.xalgowinmask.lib index afaf676..ad2c1fe 100644 --- a/src/algo/winmask/Makefile.xalgowinmask.lib +++ b/src/algo/winmask/Makefile.xalgowinmask.lib @@ -21,3 +21,5 @@ SRC = seq_masker seq_masker_score_mean seq_masker_score_mean_glob \ CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) +DLL_LIB = seqmasks_io xobjread xobjutil + diff --git a/src/cgi/Makefile.cgi.lib b/src/cgi/Makefile.cgi.lib index fb543d7..10762e4 100644 --- a/src/cgi/Makefile.cgi.lib +++ b/src/cgi/Makefile.cgi.lib @@ -12,3 +12,5 @@ LIB = xcgi CPPFLAGS = $(ORIG_CPPFLAGS) $(FASTCGI_INCLUDE) WATCHERS = vakatov + +DLL_LIB = xncbi xutil diff --git a/src/cgi/Makefile.fcgi.lib b/src/cgi/Makefile.fcgi.lib index f68060b..c87d8e9 100644 --- a/src/cgi/Makefile.fcgi.lib +++ b/src/cgi/Makefile.fcgi.lib @@ -12,3 +12,5 @@ LIB = xfcgi CPPFLAGS = $(ORIG_CPPFLAGS) $(FASTCGI_INCLUDE) -DNCBI_XFCGI_EXPORTS WATCHERS = vakatov + +DLL_LIB = xncbi xutil diff --git a/src/connect/Makefile.connssl.lib b/src/connect/Makefile.connssl.lib index b400ca2..8756320 100644 --- a/src/connect/Makefile.connssl.lib +++ b/src/connect/Makefile.connssl.lib @@ -8,3 +8,5 @@ CPPFLAGS = $(GNUTLS_INCLUDE) $(ORIG_CPPFLAGS) LIBS = $(GNUTLS_LIBS) $(ORIG_LIBS) WATCHERS = lavr + +DLL_LIB = connect diff --git a/src/connect/Makefile.xconnect.lib b/src/connect/Makefile.xconnect.lib index 473bb0b..88dae10 100644 --- a/src/connect/Makefile.xconnect.lib +++ b/src/connect/Makefile.xconnect.lib @@ -11,9 +11,13 @@ include $(srcdir)/Makefile.xxconnect.lib SRC = $(SRC_C) $(SRC_CXX) UNIX_SRC = $(LOCAL_LBSM) +DLL_LIB = xncbi + LIB = xconnect PROJ_TAG = core LIBS = $(NETWORK_LIBS) $(ORIG_LIBS) WATCHERS = lavr + +DLL_LIB = xncbi xutil diff --git a/src/connect/Makefile.xthrserv.lib b/src/connect/Makefile.xthrserv.lib index c7060d2..0dd00a0 100644 --- a/src/connect/Makefile.xthrserv.lib +++ b/src/connect/Makefile.xthrserv.lib @@ -4,6 +4,6 @@ SRC = threaded_server server server_monitor connection_pool LIB = xthrserv PROJ_TAG = core LIBS = $(NETWORK_LIBS) -DLL_LIB = xutil xconnect +DLL_LIB = xncbi xutil xconnect WATCHERS = vakatov diff --git a/src/connect/Makefile.xxconnect.lib b/src/connect/Makefile.xxconnect.lib index d7ba751..8e27819 100644 --- a/src/connect/Makefile.xxconnect.lib +++ b/src/connect/Makefile.xxconnect.lib @@ -16,3 +16,5 @@ PROJ_TAG = core LIBS = $(NETWORK_LIBS) $(ORIG_LIBS) WATCHERS = lavr + +DLL_LIB = xncbi xutil connect diff --git a/src/connect/services/Makefile.ncbi_xcache_netcache.lib b/src/connect/services/Makefile.ncbi_xcache_netcache.lib index 606f4f1..e6cfdac 100644 --- a/src/connect/services/Makefile.ncbi_xcache_netcache.lib +++ b/src/connect/services/Makefile.ncbi_xcache_netcache.lib @@ -6,7 +6,7 @@ SRC = neticache_client LIB = ncbi_xcache_netcache LIB_OR_DLL = both -DLL_LIB = xconnserv xconnect xutil +DLL_LIB = xconnserv xconnect xutil xncbi CPPFLAGS = $(ORIG_CPPFLAGS) LIBS = $(ORIG_LIBS) diff --git a/src/connect/services/Makefile.xconnserv.lib b/src/connect/services/Makefile.xconnserv.lib index 77382f2..5d124f2 100644 --- a/src/connect/services/Makefile.xconnserv.lib +++ b/src/connect/services/Makefile.xconnserv.lib @@ -15,6 +15,6 @@ LIB = xconnserv PROJ_TAG = core LIBS = $(NETWORK_LIBS) -DLL_LIB = xthrserv xconnect xutil +DLL_LIB = xthrserv xconnect xutil xncbi WATCHERS = kazimird diff --git a/src/corelib/Makefile.test_boost.lib b/src/corelib/Makefile.test_boost.lib index 9d34c45..5678a38 100644 --- a/src/corelib/Makefile.test_boost.lib +++ b/src/corelib/Makefile.test_boost.lib @@ -9,3 +9,5 @@ REQUIRES = Boost.Test.Included WATCHERS = vakatov PROJ_TAG = test + +DLL_LIB = xncbi diff --git a/src/corelib/Makefile.test_mt.lib b/src/corelib/Makefile.test_mt.lib index 6153eab..f64c3a2 100644 --- a/src/corelib/Makefile.test_mt.lib +++ b/src/corelib/Makefile.test_mt.lib @@ -8,3 +8,5 @@ LIB = test_mt USE_PCH = no WATCHERS = grichenk PROJ_TAG = test + +DLL_LIB = xncbi diff --git a/src/corelib/test/Makefile.pbacktest.lib b/src/corelib/test/Makefile.pbacktest.lib index da0c616..c4c62ab 100644 --- a/src/corelib/test/Makefile.pbacktest.lib +++ b/src/corelib/test/Makefile.pbacktest.lib @@ -4,3 +4,5 @@ SRC = pbacktest LIB = xpbacktest WATCHERS = lavr + +DLL_LIB = xncbi diff --git a/src/db/bdb/Makefile.bdb.lib b/src/db/bdb/Makefile.bdb.lib index 3729707..cd2827c 100644 --- a/src/db/bdb/Makefile.bdb.lib +++ b/src/db/bdb/Makefile.bdb.lib @@ -14,3 +14,7 @@ LIB = bdb CPPFLAGS = $(ORIG_CPPFLAGS) $(BERKELEYDB_INCLUDE) WATCHERS = kuznets + +DLL_LIB = xncbi xutil +LIBS = $(BERKELEYDB_LIBS) + diff --git a/src/db/bdb/Makefile.ncbi_xcache_bdb.lib b/src/db/bdb/Makefile.ncbi_xcache_bdb.lib index 7e97a26..8f54efc 100644 --- a/src/db/bdb/Makefile.ncbi_xcache_bdb.lib +++ b/src/db/bdb/Makefile.ncbi_xcache_bdb.lib @@ -8,7 +8,7 @@ SRC = bdb_blobcache LIB = ncbi_xcache_bdb LIB_OR_DLL = both -DLL_LIB = bdb xutil +DLL_LIB = bdb xutil xncbi CPPFLAGS = $(ORIG_CPPFLAGS) $(BERKELEYDB_INCLUDE) LIBS = $(BERKELEYDB_LIBS) $(ORIG_LIBS) diff --git a/src/db/sqlite/Makefile.sqlitewrapp.lib b/src/db/sqlite/Makefile.sqlitewrapp.lib index 77c9bf5..2c136d1 100644 --- a/src/db/sqlite/Makefile.sqlitewrapp.lib +++ b/src/db/sqlite/Makefile.sqlitewrapp.lib @@ -8,3 +8,6 @@ CPPFLAGS= $(ORIG_CPPFLAGS) $(SQLITE3_INCLUDE) REQUIRES = SQLITE3 WATCHERS = vakatov + +DLL_LIB = xncbi xutil +LIBS = $(SQLITE3_LIBS) diff --git a/src/dbapi/Makefile.dbapi.lib b/src/dbapi/Makefile.dbapi.lib index 9e45b7a..b3fbb74 100644 --- a/src/dbapi/Makefile.dbapi.lib +++ b/src/dbapi/Makefile.dbapi.lib @@ -10,3 +10,8 @@ LIB = dbapi CPPFLAGS = $(ORIG_CPPFLAGS) $(SYBASE_INCLUDE) WATCHERS = ucko + +#ASN_DEP = driver dbapi_driver + +DLL_LIB = xncbi xutil # dbapi_driver$(DLL) +LIBS = $(PYTHON_LIBS) diff --git a/src/dbapi/driver/Makefile.dbapi_driver.lib b/src/dbapi/driver/Makefile.dbapi_driver.lib index 779ea8f..fd6306b 100644 --- a/src/dbapi/driver/Makefile.dbapi_driver.lib +++ b/src/dbapi/driver/Makefile.dbapi_driver.lib @@ -22,3 +22,5 @@ CXXFLAGS_darwin = -fno-inline CXXFLAGS = $(ORIG_CXXFLAGS) $(CXXFLAGS_$(OSTYPE)) WATCHERS = ucko + +DLL_LIB = xncbi xutil diff --git a/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib b/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib index 672570d..817f07a 100644 --- a/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib +++ b/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib @@ -6,3 +6,5 @@ LIB = dbapi_sample_base CPPFLAGS = $(ORIG_CPPFLAGS) $(SYBASE_INCLUDE) WATCHERS = ucko + +DLL_LIB = xncbi xutil dbapi_driver diff --git a/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib b/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib index 2cfe73f..6ce8c66 100644 --- a/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib +++ b/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib @@ -11,6 +11,6 @@ LIB_OR_DLL = dll # Dependencies for shared library DLL_LIB = dbapi dbapi_driver$(DLL) $(XCONNEXT) xconnect xutil xncbi -LIBS = $(RUNPATH_ORIGIN)/python_ncbi_dbapi/$(NCBI_PACKAGE_VERSION) $(ORIG_LIBS) +LIBS = $(RUNPATH_ORIGIN)/python_ncbi_dbapi/$(NCBI_PACKAGE_VERSION) $(ORIG_LIBS) $(PYTHON_LIBS) WATCHERS = ucko diff --git a/src/dbapi/simple/Makefile.sdbapi.lib b/src/dbapi/simple/Makefile.sdbapi.lib index 75be96d..bc87bc1 100644 --- a/src/dbapi/simple/Makefile.sdbapi.lib +++ b/src/dbapi/simple/Makefile.sdbapi.lib @@ -1,3 +1,4 @@ +<<<<<<< # $Id: Makefile.sdbapi.lib 370257 2012-07-27 14:56:37Z ivanovp $ SRC = sdbapi @@ -5,3 +6,13 @@ LIB = sdbapi WATCHERS = ucko +||||||| + +WATCHERS = ivanovp + +======= + +WATCHERS = ivanovp + +DLL_LIB = xncbi xutil dbapi_driver ncbi_xdbapi_ftds xconnect xser bdb xconnserv +>>>>>>> diff --git a/src/html/Makefile.html.lib b/src/html/Makefile.html.lib index a57c1e3..0005299 100644 --- a/src/html/Makefile.html.lib +++ b/src/html/Makefile.html.lib @@ -8,3 +8,5 @@ SRC = node html htmlhelper page pager selection components \ LIB = xhtml WATCHERS = ivanov + +DLL_LIB = xncbi xutil diff --git a/src/misc/cgi_redirect/Makefile.cgi_redirect.lib b/src/misc/cgi_redirect/Makefile.cgi_redirect.lib index 6d7a4af..332e5d0 100644 --- a/src/misc/cgi_redirect/Makefile.cgi_redirect.lib +++ b/src/misc/cgi_redirect/Makefile.cgi_redirect.lib @@ -7,3 +7,5 @@ SRC = redirect LIB = xcgi_redirect WATCHERS = ivanov + +DLL_LIB = axf dbapi_driver xcgi xhtml xncbi diff --git a/src/misc/grid_cgi/Makefile.xgridcgi.lib b/src/misc/grid_cgi/Makefile.xgridcgi.lib index c9ef138..8e25cbe 100644 --- a/src/misc/grid_cgi/Makefile.xgridcgi.lib +++ b/src/misc/grid_cgi/Makefile.xgridcgi.lib @@ -9,3 +9,5 @@ LIB = xgridcgi CPPFLAGS = $(ORIG_CPPFLAGS) $(FASTCGI_INCLUDE) WATCHERS = vakatov + +DLL_LIB = xncbi xcgi xconnserv xhtml diff --git a/src/objects/access/Makefile.access.lib b/src/objects/access/Makefile.access.lib index 11421d9..e7900a1 100644 --- a/src/objects/access/Makefile.access.lib +++ b/src/objects/access/Makefile.access.lib @@ -1,2 +1,3 @@ LIB = access SRC = access__ access___ +DLL_LIB = xncbi xser diff --git a/src/objects/biblio/Makefile.biblio.lib b/src/objects/biblio/Makefile.biblio.lib index 2c7d491..cb54ba6 100644 --- a/src/objects/biblio/Makefile.biblio.lib +++ b/src/objects/biblio/Makefile.biblio.lib @@ -1,2 +1,4 @@ LIB = biblio SRC = biblio__ biblio___ citation_base + +DLL_LIB = general xser xncbi xutil diff --git a/src/objects/biotree/Makefile.biotree.lib b/src/objects/biotree/Makefile.biotree.lib index 94b7e3d..e8f047a 100644 --- a/src/objects/biotree/Makefile.biotree.lib +++ b/src/objects/biotree/Makefile.biotree.lib @@ -2,3 +2,5 @@ LIB = biotree SRC = biotree__ biotree___ + +DLL_LIB = xncbi xser diff --git a/src/objects/blast/Makefile.blast.lib b/src/objects/blast/Makefile.blast.lib index 0dd0fa3..d50f29f 100644 --- a/src/objects/blast/Makefile.blast.lib +++ b/src/objects/blast/Makefile.blast.lib @@ -2,3 +2,5 @@ LIB = xnetblast SRC = blast__ blast___ names WATCHERS = camacho + +DLL_LIB = xncbi xutil xser seq seqset scoremat diff --git a/src/objects/blast/Makefile.xnetblastcli.lib b/src/objects/blast/Makefile.xnetblastcli.lib index 96325c4..d30f8ee 100644 --- a/src/objects/blast/Makefile.xnetblastcli.lib +++ b/src/objects/blast/Makefile.xnetblastcli.lib @@ -2,3 +2,5 @@ ASN_DEP = xnetblast LIB = xnetblastcli SRC = blastclient blastclient_ + +DLL_LIB = xncbi xutil seqset xconnect xnetblast diff --git a/src/objects/blastdb/Makefile.blastdb.lib b/src/objects/blastdb/Makefile.blastdb.lib index be2c0d1..2884db2 100644 --- a/src/objects/blastdb/Makefile.blastdb.lib +++ b/src/objects/blastdb/Makefile.blastdb.lib @@ -1,2 +1,4 @@ LIB = blastdb SRC = blastdb__ blastdb___ + +DLL_LIB = xncbi xser seq diff --git a/src/objects/blastxml/Makefile.blastxml.lib b/src/objects/blastxml/Makefile.blastxml.lib index d18eb78..f90501d 100644 --- a/src/objects/blastxml/Makefile.blastxml.lib +++ b/src/objects/blastxml/Makefile.blastxml.lib @@ -1,2 +1,4 @@ LIB = blastxml SRC = blastxml__ blastxml___ + +DLL_LIB = xser diff --git a/src/objects/cdd/Makefile.cdd.lib b/src/objects/cdd/Makefile.cdd.lib index 978cae9..24b726c 100644 --- a/src/objects/cdd/Makefile.cdd.lib +++ b/src/objects/cdd/Makefile.cdd.lib @@ -1,2 +1,4 @@ LIB = cdd SRC = cdd__ cdd___ + +DLL_LIB = mmdb xser scoremat cn3d diff --git a/src/objects/cn3d/Makefile.cn3d.lib b/src/objects/cn3d/Makefile.cn3d.lib index 1af5d1d..ecd31b2 100644 --- a/src/objects/cn3d/Makefile.cn3d.lib +++ b/src/objects/cn3d/Makefile.cn3d.lib @@ -1,3 +1,5 @@ ASN_DEP = mmdb LIB = cn3d SRC = cn3d__ cn3d___ + +DLL_LIB = mmdb xser diff --git a/src/objects/docsum/Makefile.docsum.lib b/src/objects/docsum/Makefile.docsum.lib index 0e68886..0bc8a1c 100644 --- a/src/objects/docsum/Makefile.docsum.lib +++ b/src/objects/docsum/Makefile.docsum.lib @@ -1,2 +1,4 @@ LIB = docsum SRC = docsum__ docsum___ + +DLL_LIB = xser diff --git a/src/objects/entrez2/Makefile.entrez2.lib b/src/objects/entrez2/Makefile.entrez2.lib index 4507f72..4c47ad3 100644 --- a/src/objects/entrez2/Makefile.entrez2.lib +++ b/src/objects/entrez2/Makefile.entrez2.lib @@ -2,3 +2,5 @@ WATCHERS = lavr LIB = entrez2 SRC = entrez2__ entrez2___ + +DLL_LIB = xser diff --git a/src/objects/entrez2/Makefile.entrez2cli.lib b/src/objects/entrez2/Makefile.entrez2cli.lib index 42a4649..2fdcc6f 100644 --- a/src/objects/entrez2/Makefile.entrez2cli.lib +++ b/src/objects/entrez2/Makefile.entrez2cli.lib @@ -4,3 +4,5 @@ ASN_DEP = entrez2 LIB = entrez2cli SRC = entrez2_client entrez2_client_ + +DLL_LIB = xncbi xconnect entrez2 diff --git a/src/objects/entrezgene/Makefile.entrezgene.lib b/src/objects/entrezgene/Makefile.entrezgene.lib index a1bd4f4..27319c3 100644 --- a/src/objects/entrezgene/Makefile.entrezgene.lib +++ b/src/objects/entrezgene/Makefile.entrezgene.lib @@ -1,2 +1,4 @@ LIB = entrezgene SRC = entrezgene__ entrezgene___ + +DLL_LIB = xser seq diff --git a/src/objects/featdef/Makefile.featdef.lib b/src/objects/featdef/Makefile.featdef.lib index 51c7c8d..e603711 100644 --- a/src/objects/featdef/Makefile.featdef.lib +++ b/src/objects/featdef/Makefile.featdef.lib @@ -1,2 +1,4 @@ LIB = featdef SRC = featdef__ featdef___ + +DLL_LIB = xser diff --git a/src/objects/gbseq/Makefile.gbseq.lib b/src/objects/gbseq/Makefile.gbseq.lib index 9dabdeb..4b27881 100644 --- a/src/objects/gbseq/Makefile.gbseq.lib +++ b/src/objects/gbseq/Makefile.gbseq.lib @@ -1,2 +1,4 @@ LIB = gbseq SRC = gbseq__ gbseq___ + +DLL_LIB = xser diff --git a/src/objects/general/Makefile.general.lib b/src/objects/general/Makefile.general.lib index 951304f..3be083d 100644 --- a/src/objects/general/Makefile.general.lib +++ b/src/objects/general/Makefile.general.lib @@ -1,2 +1,4 @@ LIB = general SRC = general__ general___ uoconv + +DLL_LIB = xser xncbi xutil diff --git a/src/objects/genomecoll/Makefile.genome_collection.lib b/src/objects/genomecoll/Makefile.genome_collection.lib index f039af6..f6b41a7 100644 --- a/src/objects/genomecoll/Makefile.genome_collection.lib +++ b/src/objects/genomecoll/Makefile.genome_collection.lib @@ -4,3 +4,5 @@ LIB = genome_collection SRC = genome_collection__ genome_collection___ WATCHERS = dicuccio + +DLL_LIB = xser seq diff --git a/src/objects/homologene/Makefile.homologene.lib b/src/objects/homologene/Makefile.homologene.lib index 15d13ad..d44b2e3 100644 --- a/src/objects/homologene/Makefile.homologene.lib +++ b/src/objects/homologene/Makefile.homologene.lib @@ -4,3 +4,5 @@ LIB = homologene SRC = homologene__ homologene___ + +DLL_LIB = xser seq diff --git a/src/objects/id1/Makefile.id1.lib b/src/objects/id1/Makefile.id1.lib index d60c728..bf98427 100644 --- a/src/objects/id1/Makefile.id1.lib +++ b/src/objects/id1/Makefile.id1.lib @@ -4,3 +4,5 @@ LIB = id1 SRC = id1__ id1___ WATCHERS = vasilche + +DLL_LIB = xser seqset diff --git a/src/objects/id1/Makefile.id1cli.lib b/src/objects/id1/Makefile.id1cli.lib index e87ea83..745c5cb 100644 --- a/src/objects/id1/Makefile.id1cli.lib +++ b/src/objects/id1/Makefile.id1cli.lib @@ -4,3 +4,5 @@ LIB = id1cli SRC = id1_client id1_client_ WATCHERS = vasilche + +DLL_LIB = id1 xconnect diff --git a/src/objects/id2/Makefile.id2.lib b/src/objects/id2/Makefile.id2.lib index 09d8b36..1e74a58 100644 --- a/src/objects/id2/Makefile.id2.lib +++ b/src/objects/id2/Makefile.id2.lib @@ -2,3 +2,5 @@ LIB = id2 SRC = id2__ id2___ WATCHERS = vasilche + +DLL_LIB = xser seq seqsplit diff --git a/src/objects/id2/Makefile.id2cli.lib b/src/objects/id2/Makefile.id2cli.lib index 5d41f23..ccec62a 100644 --- a/src/objects/id2/Makefile.id2cli.lib +++ b/src/objects/id2/Makefile.id2cli.lib @@ -4,3 +4,5 @@ LIB = id2cli SRC = id2_client id2_client_ WATCHERS = vasilche + +DLL_LIB = id2 xconnect diff --git a/src/objects/insdseq/Makefile.insdseq.lib b/src/objects/insdseq/Makefile.insdseq.lib index fa729b7..5754057 100644 --- a/src/objects/insdseq/Makefile.insdseq.lib +++ b/src/objects/insdseq/Makefile.insdseq.lib @@ -1,2 +1,4 @@ LIB = insdseq SRC = insdseq__ insdseq___ + +DLL_LIB = xser diff --git a/src/objects/macro/Makefile.macro.lib b/src/objects/macro/Makefile.macro.lib index 3a0a7c0..25a3b73 100644 --- a/src/objects/macro/Makefile.macro.lib +++ b/src/objects/macro/Makefile.macro.lib @@ -2,3 +2,5 @@ LIB = macro SRC = macro__ macro___ + +DLL_LIB = xser diff --git a/src/objects/medlars/Makefile.medlars.lib b/src/objects/medlars/Makefile.medlars.lib index 3a6d0cd..5c8e00e 100644 --- a/src/objects/medlars/Makefile.medlars.lib +++ b/src/objects/medlars/Makefile.medlars.lib @@ -1,2 +1,4 @@ LIB = medlars SRC = medlars__ medlars___ + +DLL_LIB = xser biblio diff --git a/src/objects/medline/Makefile.medline.lib b/src/objects/medline/Makefile.medline.lib index ea28066..eb42aa4 100644 --- a/src/objects/medline/Makefile.medline.lib +++ b/src/objects/medline/Makefile.medline.lib @@ -1,2 +1,4 @@ LIB = medline SRC = medline__ medline___ + +DLL_LIB = general biblio diff --git a/src/objects/mim/Makefile.mim.lib b/src/objects/mim/Makefile.mim.lib index c2cd50e..2fed8f4 100644 --- a/src/objects/mim/Makefile.mim.lib +++ b/src/objects/mim/Makefile.mim.lib @@ -1,2 +1,4 @@ LIB = mim SRC = mim__ mim___ + +DLL_LIB = xser diff --git a/src/objects/mla/Makefile.mla.lib b/src/objects/mla/Makefile.mla.lib index a748f68..5b5523a 100644 --- a/src/objects/mla/Makefile.mla.lib +++ b/src/objects/mla/Makefile.mla.lib @@ -1,2 +1,4 @@ LIB = mla SRC = mla__ mla___ + +DLL_LIB = xser medline pubmed pub medlars diff --git a/src/objects/mla/Makefile.mlacli.lib b/src/objects/mla/Makefile.mlacli.lib index 48af427..4cee3ac 100644 --- a/src/objects/mla/Makefile.mlacli.lib +++ b/src/objects/mla/Makefile.mlacli.lib @@ -2,3 +2,5 @@ ASN_DEP = mla LIB = mlacli SRC = mla_client mla_client_ + +DLL_LIB = xncbi xconnect mla diff --git a/src/objects/mmdb/Makefile.mmdb.lib b/src/objects/mmdb/Makefile.mmdb.lib index 6fc8e25..5c6c100 100644 --- a/src/objects/mmdb/Makefile.mmdb.lib +++ b/src/objects/mmdb/Makefile.mmdb.lib @@ -8,3 +8,5 @@ CPPFLAGS = -I$(srcdir) -I$(top_srcdir)/src/objects/mmdb $(ORIG_CPPFLAGS) LIB = mmdb SRC = $(ASN:%=%__) $(ASN:%=%___) + +DLL_LIB = xser pub seq diff --git a/src/objects/ncbimime/Makefile.ncbimime.lib b/src/objects/ncbimime/Makefile.ncbimime.lib index 93cafdf..1360ade 100644 --- a/src/objects/ncbimime/Makefile.ncbimime.lib +++ b/src/objects/ncbimime/Makefile.ncbimime.lib @@ -1,2 +1,4 @@ LIB = ncbimime SRC = ncbimime__ ncbimime___ + +DLL_LIB = mmdb cn3d seqset cdd diff --git a/src/objects/objprt/Makefile.objprt.lib b/src/objects/objprt/Makefile.objprt.lib index 40d6b09..c00e6d2 100644 --- a/src/objects/objprt/Makefile.objprt.lib +++ b/src/objects/objprt/Makefile.objprt.lib @@ -1,2 +1,4 @@ LIB = objprt SRC = objprt__ objprt___ + +DLL_LIB = xser diff --git a/src/objects/omssa/Makefile.omssa.lib b/src/objects/omssa/Makefile.omssa.lib index b79617f..e1d4a9e 100644 --- a/src/objects/omssa/Makefile.omssa.lib +++ b/src/objects/omssa/Makefile.omssa.lib @@ -2,3 +2,5 @@ APP_DEP = seq LIB = omssa SRC = omssa__ omssa___ + +DLL_LIB = seq diff --git a/src/objects/pcassay/Makefile.pcassay.lib b/src/objects/pcassay/Makefile.pcassay.lib index 1086865..587adb5 100644 --- a/src/objects/pcassay/Makefile.pcassay.lib +++ b/src/objects/pcassay/Makefile.pcassay.lib @@ -1,2 +1,4 @@ LIB = pcassay SRC = pcassay__ pcassay___ + +DLL_LIB = xser pcsubstance seq diff --git a/src/objects/pcsubstance/Makefile.pcsubstance.lib b/src/objects/pcsubstance/Makefile.pcsubstance.lib index b36802e..c3f6a39 100644 --- a/src/objects/pcsubstance/Makefile.pcsubstance.lib +++ b/src/objects/pcsubstance/Makefile.pcsubstance.lib @@ -1,2 +1,4 @@ LIB = pcsubstance SRC = pcsubstance__ pcsubstance___ + +DLL_LIB = xser general pub diff --git a/src/objects/proj/Makefile.proj.lib b/src/objects/proj/Makefile.proj.lib index c5bb3d3..fbde99a 100644 --- a/src/objects/proj/Makefile.proj.lib +++ b/src/objects/proj/Makefile.proj.lib @@ -1,2 +1,4 @@ LIB = proj SRC = proj__ proj___ + +DLL_LIB = xser pubmed seqset diff --git a/src/objects/pub/Makefile.pub.lib b/src/objects/pub/Makefile.pub.lib index 78c12e1..9baa08d 100644 --- a/src/objects/pub/Makefile.pub.lib +++ b/src/objects/pub/Makefile.pub.lib @@ -1,2 +1,4 @@ LIB = pub SRC = pub__ pub___ + +DLL_LIB = medline biblio diff --git a/src/objects/pubmed/Makefile.pubmed.lib b/src/objects/pubmed/Makefile.pubmed.lib index 8b8d553..46e3125 100644 --- a/src/objects/pubmed/Makefile.pubmed.lib +++ b/src/objects/pubmed/Makefile.pubmed.lib @@ -1,2 +1,4 @@ LIB = pubmed SRC = pubmed__ pubmed___ + +DLL_LIB = xser medline diff --git a/src/objects/remap/Makefile.remap.lib b/src/objects/remap/Makefile.remap.lib index 9a35d90..1256648 100644 --- a/src/objects/remap/Makefile.remap.lib +++ b/src/objects/remap/Makefile.remap.lib @@ -1,2 +1,4 @@ LIB = remap SRC = remap__ remap___ + +DLL_LIB = xser seq diff --git a/src/objects/remap/Makefile.remapcli.lib b/src/objects/remap/Makefile.remapcli.lib index e45f34f..2751bf9 100644 --- a/src/objects/remap/Makefile.remapcli.lib +++ b/src/objects/remap/Makefile.remapcli.lib @@ -4,3 +4,5 @@ ASN_DEP = remap LIB = remapcli SRC = remap_client remap_client_ + +DLL_LIB = xncbi xconnect remap diff --git a/src/objects/scoremat/Makefile.scoremat.lib b/src/objects/scoremat/Makefile.scoremat.lib index 62e01f5..93bb071 100644 --- a/src/objects/scoremat/Makefile.scoremat.lib +++ b/src/objects/scoremat/Makefile.scoremat.lib @@ -1,2 +1,4 @@ LIB = scoremat SRC = scoremat__ scoremat___ + +DLL_LIB = seqset seq diff --git a/src/objects/seq/Makefile.seq.lib b/src/objects/seq/Makefile.seq.lib index 1b5edc5..30ef316 100644 --- a/src/objects/seq/Makefile.seq.lib +++ b/src/objects/seq/Makefile.seq.lib @@ -13,3 +13,5 @@ SRC = $(ASN:%=%__) $(ASN:%=%___) seqport_util \ seq_loc_from_string seq_loc_reverse_complementer WATCHERS = vasilche grichenk + +DLL_LIB = general seqcode pub sequtil biblio xser xncbi xutil diff --git a/src/objects/seqcode/Makefile.seqcode.lib b/src/objects/seqcode/Makefile.seqcode.lib index dc9d60e..dabd95b 100644 --- a/src/objects/seqcode/Makefile.seqcode.lib +++ b/src/objects/seqcode/Makefile.seqcode.lib @@ -1,2 +1,4 @@ LIB = seqcode SRC = seqcode__ seqcode___ + +DLL_LIB = xncbi xser diff --git a/src/objects/seqedit/Makefile.seqedit.lib b/src/objects/seqedit/Makefile.seqedit.lib index 283a9b7..520b0bb 100644 --- a/src/objects/seqedit/Makefile.seqedit.lib +++ b/src/objects/seqedit/Makefile.seqedit.lib @@ -1,3 +1,4 @@ LIB = seqedit SRC = seqedit__ seqedit___ +DLL_LIB = xser seq seqset diff --git a/src/objects/seqset/Makefile.seqset.lib b/src/objects/seqset/Makefile.seqset.lib index 87f16d0..febce67 100644 --- a/src/objects/seqset/Makefile.seqset.lib +++ b/src/objects/seqset/Makefile.seqset.lib @@ -1,2 +1,3 @@ LIB = seqset SRC = seqset__ seqset___ gb_release_file +DLL_LIB = xser seq diff --git a/src/objects/seqsplit/Makefile.seqsplit.lib b/src/objects/seqsplit/Makefile.seqsplit.lib index 87ae869..1743321 100644 --- a/src/objects/seqsplit/Makefile.seqsplit.lib +++ b/src/objects/seqsplit/Makefile.seqsplit.lib @@ -2,3 +2,5 @@ LIB = seqsplit SRC = seqsplit__ seqsplit___ WATCHERS = vasilche + +DLL_LIB = xser seq seqset diff --git a/src/objects/seqtest/Makefile.seqtest.lib b/src/objects/seqtest/Makefile.seqtest.lib index 609a12c..e3d1e4b 100644 --- a/src/objects/seqtest/Makefile.seqtest.lib +++ b/src/objects/seqtest/Makefile.seqtest.lib @@ -4,3 +4,5 @@ ASN = seqtest LIB = seqtest SRC = $(ASN:%=%__) $(ASN:%=%___) + +DLL_LIB = xser seq diff --git a/src/objects/submit/Makefile.submit.lib b/src/objects/submit/Makefile.submit.lib index 74798f8..c74707c 100644 --- a/src/objects/submit/Makefile.submit.lib +++ b/src/objects/submit/Makefile.submit.lib @@ -1,2 +1,3 @@ LIB = submit SRC = submit__ submit___ +DLL_LIB = xser xncbi seq biblio seqset diff --git a/src/objects/taxon1/Makefile.taxon1.lib b/src/objects/taxon1/Makefile.taxon1.lib index f0f9c66..35d6a61 100644 --- a/src/objects/taxon1/Makefile.taxon1.lib +++ b/src/objects/taxon1/Makefile.taxon1.lib @@ -4,3 +4,5 @@ LIB = taxon1 SRC = taxon1__ taxon1___ taxon1 cache utils ctreecont WATCHERS = domrach + +DLL_LIB = xser seq xconnect diff --git a/src/objects/taxon3/Makefile.taxon3.lib b/src/objects/taxon3/Makefile.taxon3.lib index 7e4c93d..00be2c0 100644 --- a/src/objects/taxon3/Makefile.taxon3.lib +++ b/src/objects/taxon3/Makefile.taxon3.lib @@ -4,3 +4,5 @@ LIB = taxon3 SRC = taxon3__ taxon3___ taxon3 WATCHERS = bollin + +DLL_LIB = connect xser xconnect seq diff --git a/src/objects/tinyseq/Makefile.tinyseq.lib b/src/objects/tinyseq/Makefile.tinyseq.lib index 1c7ccf3..e1954cc 100644 --- a/src/objects/tinyseq/Makefile.tinyseq.lib +++ b/src/objects/tinyseq/Makefile.tinyseq.lib @@ -1,2 +1,4 @@ LIB = tinyseq SRC = tinyseq__ tinyseq___ + +DLL_LIB = xser diff --git a/src/objects/valerr/Makefile.valerr.lib b/src/objects/valerr/Makefile.valerr.lib index b202355..9699bb2 100644 --- a/src/objects/valerr/Makefile.valerr.lib +++ b/src/objects/valerr/Makefile.valerr.lib @@ -2,3 +2,5 @@ LIB = valerr SRC = valerr__ valerr___ ASN_DEP = seqset + +DLL_LIB = xser diff --git a/src/objects/valid/Makefile.valid.lib b/src/objects/valid/Makefile.valid.lib index 86a00a0..64226d6 100644 --- a/src/objects/valid/Makefile.valid.lib +++ b/src/objects/valid/Makefile.valid.lib @@ -1,3 +1,5 @@ # $Id: Makefile.valid.lib 156738 2009-04-07 16:35:10Z ucko $ LIB = valid SRC = valid__ valid___ + +DLL_LIB = xser xregexp diff --git a/src/objects/variation/Makefile.variation.lib b/src/objects/variation/Makefile.variation.lib index f21f84a..9ba5e9d 100644 --- a/src/objects/variation/Makefile.variation.lib +++ b/src/objects/variation/Makefile.variation.lib @@ -1,2 +1,3 @@ LIB = variation SRC = variation__ variation___ +DLL_LIB = xser general seq diff --git a/src/objmgr/split/Makefile.id2_split.lib b/src/objmgr/split/Makefile.id2_split.lib index fafa70a..8a53975 100644 --- a/src/objmgr/split/Makefile.id2_split.lib +++ b/src/objmgr/split/Makefile.id2_split.lib @@ -17,6 +17,6 @@ LIB = id2_split CPPFLAGS = $(ORIG_CPPFLAGS) $(CMPRS_INCLUDE) -DLL_LIB = $(SOBJMGR_LIBS) +DLL_LIB = $(SOBJMGR_LIBS) seqsplit xcompress WATCHERS = vasilche diff --git a/src/objmgr/util/Makefile.util.lib b/src/objmgr/util/Makefile.util.lib index 90eeee0..138e836 100644 --- a/src/objmgr/util/Makefile.util.lib +++ b/src/objmgr/util/Makefile.util.lib @@ -10,3 +10,4 @@ LIB = xobjutil WATCHERS = ucko vasilche +DLL_LIB = xser xobjmgr diff --git a/src/objtools/align/Makefile.xalntool.lib b/src/objtools/align/Makefile.xalntool.lib index cb9846d..9c2a8f9 100644 --- a/src/objtools/align/Makefile.xalntool.lib +++ b/src/objtools/align/Makefile.xalntool.lib @@ -6,3 +6,5 @@ ASN_DEP = seqset LIB = xalntool SRC = alngraphic + +DLL_LIB = access dbapi_driver general seq xhtml xncbi xobjmgr xobjutil xser # align_format axf blastinput diff --git a/src/objtools/align_format/Makefile.align_format.lib b/src/objtools/align_format/Makefile.align_format.lib index 1ec5bf0..6da8514 100644 --- a/src/objtools/align_format/Makefile.align_format.lib +++ b/src/objtools/align_format/Makefile.align_format.lib @@ -20,3 +20,5 @@ CPPFLAGS = -DNCBI_MODULE=BLASTFORMAT $(ORIG_CPPFLAGS) # LIB_OR_DLL = dll WATCHERS = zaretska jianye madden camacho fongah2 + +DLL_LIB = seqdb blastdb xser xhtml gene_info xnetblast blast_services ncbi_xloader_genbank xalnmgr xcgi xobjread xobjutil diff --git a/src/objtools/alnmgr/Makefile.alnmgr.lib b/src/objtools/alnmgr/Makefile.alnmgr.lib index e32c351..41355ff 100644 --- a/src/objtools/alnmgr/Makefile.alnmgr.lib +++ b/src/objtools/alnmgr/Makefile.alnmgr.lib @@ -12,3 +12,4 @@ SRC = aln_builders aln_converters aln_generators aln_seqid aln_serial \ WATCHERS = todorov dicuccio grichenk +DLL_LIB = tables dbapi_driver ncbi_xcache_bdb seq seqset sequtil xncbi xobjmgr xobjutil xser # align_format axf diff --git a/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib b/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib index 62f01fd..f7768e0 100644 --- a/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib +++ b/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib @@ -17,3 +17,5 @@ CPPFLAGS = -DNCBI_MODULE=BLASTDB $(ORIG_CPPFLAGS) # CXXFLAGS = $(FAST_CXXFLAGS) # # LIB_OR_DLL = dll + +DLL_LIB = xncbi xser xobjutil seq seqdb diff --git a/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib b/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib index 3a92e3e..79a75b9 100644 --- a/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib +++ b/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib @@ -5,3 +5,5 @@ WATCHERS = camacho CPPFLAGS = -DNCBI_MODULE=GENEINFO $(ORIG_CPPFLAGS) LIB = gene_info SRC = gene_info gene_info_reader file_utils + +DLL_LIB = xncbi diff --git a/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib b/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib index a067ae2..e1a6d3e 100644 --- a/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib +++ b/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib @@ -7,3 +7,5 @@ LIB = gene_info_writer SRC = gene_info_writer ASN_DEP = blastdb + +DLL_LIB = gene_info xncbi seqdb diff --git a/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib b/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib index 9c13307..65822c6 100644 --- a/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib +++ b/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib @@ -30,3 +30,5 @@ CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) WATCHERS = maning camacho + +DLL_LIB = blastdb xobjmgr diff --git a/src/objtools/blast/seqdb_writer/Makefile.writedb.lib b/src/objtools/blast/seqdb_writer/Makefile.writedb.lib index 3b15ed6..77f5202 100644 --- a/src/objtools/blast/seqdb_writer/Makefile.writedb.lib +++ b/src/objtools/blast/seqdb_writer/Makefile.writedb.lib @@ -14,3 +14,5 @@ CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) WATCHERS = maning camacho fongah2 + +DLL_LIB = seq blastdb seqdb xobjmgr xobjread xutil diff --git a/src/objtools/blast/services/Makefile.blast_services.lib b/src/objtools/blast/services/Makefile.blast_services.lib index ceba356..d2bd900 100644 --- a/src/objtools/blast/services/Makefile.blast_services.lib +++ b/src/objtools/blast/services/Makefile.blast_services.lib @@ -13,3 +13,4 @@ CPPFLAGS = -DNCBI_MODULE=NETBLAST $(ORIG_CPPFLAGS) CXXFLAGS = $(FAST_CXXFLAGS) LDFLAGS = $(FAST_LDFLAGS) +DLL_LIB = xncbi xser xnetblast xnetblastcli diff --git a/src/objtools/cddalignview/Makefile.cddalignview.lib b/src/objtools/cddalignview/Makefile.cddalignview.lib index 8e39baa..f4d3a35 100644 --- a/src/objtools/cddalignview/Makefile.cddalignview.lib +++ b/src/objtools/cddalignview/Makefile.cddalignview.lib @@ -11,3 +11,5 @@ SRC = \ cav_seqset LIB = xcddalignview + +DLL_LIB = cdd dbapi_driver general ncbimime seq seqset xncbi xser # align_format axf ncbi_xloader_bam diff --git a/src/objtools/cleanup/Makefile.cleanup.lib b/src/objtools/cleanup/Makefile.cleanup.lib index 291948f..adecac0 100644 --- a/src/objtools/cleanup/Makefile.cleanup.lib +++ b/src/objtools/cleanup/Makefile.cleanup.lib @@ -10,7 +10,7 @@ SRC = autogenerated_cleanup autogenerated_extended_cleanup cleanup \ cleanup_utils \ newcleanupp -DLL_LIB = xregexp $(PCRE_LIB) +DLL_LIB = xregexp $(PCRE_LIB) access biblio general pub seq seqset sequtil submit xobjmgr xobjutil xser LIB = xcleanup LIBS = $(PCRE_LIBS) diff --git a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib index 4fb6117..934a3b6 100644 --- a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib +++ b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib @@ -8,3 +8,6 @@ CPPFLAGS = -DNCBI_MODULE=BLASTDB $(ORIG_CPPFLAGS) ASN_DEP = blastdb seqset WATCHERS = camacho + +DLL_LIB = seqdb + diff --git a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib index 243467f..3a2115c 100644 --- a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib +++ b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib @@ -8,3 +8,5 @@ CPPFLAGS = -DNCBI_MODULE=BLASTDB $(ORIG_CPPFLAGS) ASN_DEP = blastdb xnetblast WATCHERS = camacho + +DLL_LIB = blast_services ncbi_xloader_blastdb xobjmgr diff --git a/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib b/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib index a51042b..fa92fc9 100644 --- a/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib +++ b/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib @@ -9,3 +9,5 @@ LIB = ncbi_xloader_cdd SRC = cdd ASN_DEP = seqset + +DLL_LIB = dbapi_driver general seq seqset xconnect xncbi xobjmgr xser # align_format axf ncbi_xloader_bam diff --git a/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib b/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib index f3bb947..90d3af9 100644 --- a/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib +++ b/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib @@ -12,7 +12,7 @@ LIB = ncbi_xreader LIB_OR_DLL = both # Dependencies for shared library -DLL_LIB = +DLL_LIB = xcompress xobjmgr seqsplit xconnect id1 id2 DLL_DLIB = $(GENBANK_READER_LDEP) WATCHERS = vasilche diff --git a/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib b/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib index 0a29cbf..74c30dc 100644 --- a/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib +++ b/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib @@ -15,3 +15,5 @@ CPPFLAGS = $(ORIG_CPPFLAGS) $(Z_INCLUDE) # DLL_LIB = xconnect ncbi_xreader$(DLL) WATCHERS = vasilche + +DLL_LIB = xncbi gene_info id2 ncbi_xreader xconnect xser diff --git a/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib b/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib index 8d09d8c..d6040ed 100644 --- a/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib +++ b/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib @@ -7,3 +7,5 @@ ASN_DEP = seq seqset seqedit WATCHERS = vasilche + +DLL_LIB = dbapi_driver seq seqedit seqset xncbi xobjmgr xser # axf diff --git a/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib b/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib index d2debd5..33fed34 100644 --- a/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib +++ b/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib @@ -9,3 +9,5 @@ LIB = ncbi_xloader_trace SRC = trace_chgr ASN_DEP = id1 + +DLL_LIB = dbapi_driver general id1 id1cli seq xncbi xobjmgr xser # align_format axf diff --git a/src/objtools/edit/Makefile.edit.lib b/src/objtools/edit/Makefile.edit.lib index 7ce0d11..f5458c5 100644 --- a/src/objtools/edit/Makefile.edit.lib +++ b/src/objtools/edit/Makefile.edit.lib @@ -11,3 +11,5 @@ LIB = xobjedit ASN_DEP = seqset WATCHERS = bollin + +DLL_LIB = xncbi seq xobjutil xobjmgr diff --git a/src/objtools/eutils/api/Makefile.eutils.lib b/src/objtools/eutils/api/Makefile.eutils.lib index da71ea9..b444e72 100644 --- a/src/objtools/eutils/api/Makefile.eutils.lib +++ b/src/objtools/eutils/api/Makefile.eutils.lib @@ -10,3 +10,5 @@ ASN_DEP = einfo esearch egquery epost elink esummary espell uilist \ ehistory WATCHERS = grichenk + +DLL_LIB = dbapi_driver xconnect xncbi xser # align_format axf ncbi_xloader_bam diff --git a/src/objtools/eutils/egquery/Makefile.egquery.lib b/src/objtools/eutils/egquery/Makefile.egquery.lib index 82b4ed0..7030a29 100644 --- a/src/objtools/eutils/egquery/Makefile.egquery.lib +++ b/src/objtools/eutils/egquery/Makefile.egquery.lib @@ -4,3 +4,5 @@ LIB = egquery SRC = egquery__ egquery___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/ehistory/Makefile.ehistory.lib b/src/objtools/eutils/ehistory/Makefile.ehistory.lib index f99ca0f..5683a74 100644 --- a/src/objtools/eutils/ehistory/Makefile.ehistory.lib +++ b/src/objtools/eutils/ehistory/Makefile.ehistory.lib @@ -4,3 +4,5 @@ LIB = ehistory SRC = ehistory__ ehistory___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/einfo/Makefile.einfo.lib b/src/objtools/eutils/einfo/Makefile.einfo.lib index e18413d..7eaee71 100644 --- a/src/objtools/eutils/einfo/Makefile.einfo.lib +++ b/src/objtools/eutils/einfo/Makefile.einfo.lib @@ -4,3 +4,5 @@ LIB = einfo SRC = einfo__ einfo___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/elink/Makefile.elink.lib b/src/objtools/eutils/elink/Makefile.elink.lib index 87f352c..692835c 100644 --- a/src/objtools/eutils/elink/Makefile.elink.lib +++ b/src/objtools/eutils/elink/Makefile.elink.lib @@ -4,3 +4,5 @@ LIB = elink SRC = elink__ elink___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/epost/Makefile.epost.lib b/src/objtools/eutils/epost/Makefile.epost.lib index 4a456ed..d73f41b 100644 --- a/src/objtools/eutils/epost/Makefile.epost.lib +++ b/src/objtools/eutils/epost/Makefile.epost.lib @@ -4,3 +4,5 @@ LIB = epost SRC = epost__ epost___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/esearch/Makefile.esearch.lib b/src/objtools/eutils/esearch/Makefile.esearch.lib index bb5b64b..71912da 100644 --- a/src/objtools/eutils/esearch/Makefile.esearch.lib +++ b/src/objtools/eutils/esearch/Makefile.esearch.lib @@ -4,3 +4,5 @@ LIB = esearch SRC = esearch__ esearch___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/espell/Makefile.espell.lib b/src/objtools/eutils/espell/Makefile.espell.lib index 7cf1a34..25be846 100644 --- a/src/objtools/eutils/espell/Makefile.espell.lib +++ b/src/objtools/eutils/espell/Makefile.espell.lib @@ -4,3 +4,5 @@ LIB = espell SRC = espell__ espell___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/esummary/Makefile.esummary.lib b/src/objtools/eutils/esummary/Makefile.esummary.lib index 4d3e058..1f74c06 100644 --- a/src/objtools/eutils/esummary/Makefile.esummary.lib +++ b/src/objtools/eutils/esummary/Makefile.esummary.lib @@ -4,3 +4,5 @@ LIB = esummary SRC = esummary__ esummary___ WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/linkout/Makefile.linkout.lib b/src/objtools/eutils/linkout/Makefile.linkout.lib index 19b2b8a..77dcc3c 100644 --- a/src/objtools/eutils/linkout/Makefile.linkout.lib +++ b/src/objtools/eutils/linkout/Makefile.linkout.lib @@ -4,3 +4,5 @@ SRC = linkout__ linkout___ LIB = linkout WATCHERS = grichenk + +DLL_LIB = xser diff --git a/src/objtools/eutils/uilist/Makefile.uilist.lib b/src/objtools/eutils/uilist/Makefile.uilist.lib index b49c3c5..2ee63f0 100644 --- a/src/objtools/eutils/uilist/Makefile.uilist.lib +++ b/src/objtools/eutils/uilist/Makefile.uilist.lib @@ -4,3 +4,5 @@ SRC = uilist__ uilist___ LIB = uilist WATCHERS = grichenk + +DLL_LIB = access dbapi_driver xncbi xser # align_format axf diff --git a/src/objtools/format/Makefile.xformat.lib b/src/objtools/format/Makefile.xformat.lib index 041a43a..bda6c63 100644 --- a/src/objtools/format/Makefile.xformat.lib +++ b/src/objtools/format/Makefile.xformat.lib @@ -19,3 +19,5 @@ SRC = accession_item basecount_item comment_item contig_item date_item \ gather_iter html_anchor_item inst_info_map gene_finder flat_qual_slots WATCHERS = ludwigf dicuccio kornbluh + +DLL_LIB = submit connect xncbi gbseq xobjmgr xobjutil xalnmgr xconnect diff --git a/src/objtools/lds/Makefile.lds.lib b/src/objtools/lds/Makefile.lds.lib index e371035..689cfb4 100644 --- a/src/objtools/lds/Makefile.lds.lib +++ b/src/objtools/lds/Makefile.lds.lib @@ -9,6 +9,6 @@ SRC = lds lds_reader lds_query \ lds_coreobjreader lds_files lds_object lds_manager # Dependencies for shared library -DLL_LIB = bdb +DLL_LIB = bdb seq xobjread xobjmgr xobjutil WATCHERS = vasilche diff --git a/src/objtools/manip/Makefile.xobjmanip.lib b/src/objtools/manip/Makefile.xobjmanip.lib index 300ceb2..4a81ac9 100644 --- a/src/objtools/manip/Makefile.xobjmanip.lib +++ b/src/objtools/manip/Makefile.xobjmanip.lib @@ -6,3 +6,5 @@ LIB = xobjmanip SRC = sage_manip WATCHERS = dicuccio + +DLL_LIB = xncbi general diff --git a/src/objtools/readers/Makefile.xobjread.lib b/src/objtools/readers/Makefile.xobjread.lib index 8c9d2bf..28bbb88 100644 --- a/src/objtools/readers/Makefile.xobjread.lib +++ b/src/objtools/readers/Makefile.xobjread.lib @@ -19,5 +19,4 @@ SRC = read_util format_guess_ex \ best_feat_finder source_mod_parser fasta_exception -DLL_LIB = creaders - +DLL_LIB = creaders xncbi seq biblio seqset diff --git a/src/objtools/readers/Makefile.xobjreadex.lib b/src/objtools/readers/Makefile.xobjreadex.lib index 85eefe2..9f317ae 100644 --- a/src/objtools/readers/Makefile.xobjreadex.lib +++ b/src/objtools/readers/Makefile.xobjreadex.lib @@ -8,4 +8,4 @@ LIB = xobjreadex SRC = glimmer_reader idmapper idmapper_builtin idmapper_config \ idmapper_database source_mod_parser_wrapper -DLL_LIB = xobjread +DLL_LIB = xobjread xncbi xutil seq xobjmgr xobjutil diff --git a/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib b/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib index 8115a7f..f46b506 100644 --- a/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib +++ b/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib @@ -12,6 +12,6 @@ mask_writer_seqloc \ mask_writer_blastdb_maskinfo ASN_DEP = seqset -DLL_LIB = seqdb blastdb +DLL_LIB = seqdb blastdb xobjread xobjutil WATCHERS = morgulis camacho diff --git a/src/objtools/simple/Makefile.xobjsimple.lib b/src/objtools/simple/Makefile.xobjsimple.lib index dab25d6..f676dc7 100644 --- a/src/objtools/simple/Makefile.xobjsimple.lib +++ b/src/objtools/simple/Makefile.xobjsimple.lib @@ -10,3 +10,4 @@ ASN_DEP = seqset LIB = xobjsimple SRC = simple_om +DLL_LIB = xobjmgr ncbi_xloader_genbank diff --git a/src/objtools/snputil/Makefile.snputil.lib b/src/objtools/snputil/Makefile.snputil.lib index a259eca..dbcc9cd 100644 --- a/src/objtools/snputil/Makefile.snputil.lib +++ b/src/objtools/snputil/Makefile.snputil.lib @@ -9,3 +9,5 @@ SRC = snp_utils snp_bitfield \ ASN_DEP = seqset variation WATCHERS = rudnev + +DLL_LIB = general seq xncbi xobjmgr xser diff --git a/src/objtools/validator/Makefile.validator.lib b/src/objtools/validator/Makefile.validator.lib index 4b78f86..63c2386 100644 --- a/src/objtools/validator/Makefile.validator.lib +++ b/src/objtools/validator/Makefile.validator.lib @@ -12,3 +12,5 @@ LIB = xvalidate ASN_DEP = general biblio pub seq seqset submit taxon3 valerr valid WATCHERS = bollin + +DLL_LIB = xncbi xobjutil xalnmgr xformat taxon3 valerr valid diff --git a/src/objtools/writers/Makefile.xobjwrite.lib b/src/objtools/writers/Makefile.xobjwrite.lib index d27e197..5dde419 100644 --- a/src/objtools/writers/Makefile.xobjwrite.lib +++ b/src/objtools/writers/Makefile.xobjwrite.lib @@ -15,3 +15,4 @@ SRC = agp_write \ WATCHERS = ludwigf boukn +DLL_LIB = xobjutil xalnmgr diff --git a/src/sample/app/asn/Makefile.sample_asn.lib b/src/sample/app/asn/Makefile.sample_asn.lib index 0db9ebd..26e6ad9 100644 --- a/src/sample/app/asn/Makefile.sample_asn.lib +++ b/src/sample/app/asn/Makefile.sample_asn.lib @@ -10,3 +10,5 @@ LIB = sample_asn ASN_DEP = general WATCHERS = gouriano + +DLL_LIB = access align_format axf dbapi_driver general xncbi xser diff --git a/src/sample/app/soap/Makefile.soap_dataobj.lib b/src/sample/app/soap/Makefile.soap_dataobj.lib index 4b87f51..c398ded 100644 --- a/src/sample/app/soap/Makefile.soap_dataobj.lib +++ b/src/sample/app/soap/Makefile.soap_dataobj.lib @@ -2,3 +2,5 @@ LIB = soap_dataobj SRC = soap_dataobj__ soap_dataobj___ WATCHERS = gouriano + +DLL_LIB = access align_format axf dbapi_driver xncbi xser diff --git a/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib b/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib index f9d6103..4c22831 100644 --- a/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib +++ b/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib @@ -2,3 +2,5 @@ LIB = asn_sample_lib SRC = asn_sample_lib__ asn_sample_lib___ WATCHERS = gouriano + +DLL_LIB = access align_format axf dbapi_driver xncbi xser diff --git a/src/sample/lib/basic/Makefile.basic_sample_lib.lib b/src/sample/lib/basic/Makefile.basic_sample_lib.lib index a6ba11a..364d9fc 100644 --- a/src/sample/lib/basic/Makefile.basic_sample_lib.lib +++ b/src/sample/lib/basic/Makefile.basic_sample_lib.lib @@ -5,3 +5,5 @@ SRC = basic_sample_lib WATCHERS = gouriano + +DLL_LIB = xncbi diff --git a/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib b/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib index d2a27ef..a63a7e8 100644 --- a/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib +++ b/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib @@ -2,3 +2,5 @@ LIB = dtd_sample_lib SRC = dtd_sample_lib__ dtd_sample_lib___ WATCHERS = gouriano + +DLL_LIB = access align_format axf dbapi_driver xncbi xser diff --git a/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib b/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib index 4b7b6e2..838e8ea 100644 --- a/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib +++ b/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib @@ -2,3 +2,5 @@ LIB = xsd_sample_lib SRC = xsd_sample_lib__ xsd_sample_lib___ WATCHERS = gouriano + +DLL_LIB = access align_format axf dbapi_driver xncbi xser diff --git a/src/serial/Makefile.serial.lib b/src/serial/Makefile.serial.lib index 2563b5f..efad054 100644 --- a/src/serial/Makefile.serial.lib +++ b/src/serial/Makefile.serial.lib @@ -19,3 +19,5 @@ SRC = \ LIB = xser WATCHERS = gouriano + +DLL_LIB = xncbi xutil diff --git a/src/serial/soap/Makefile.soap.lib b/src/serial/soap/Makefile.soap.lib index e77d4ee..3b28bc4 100644 --- a/src/serial/soap/Makefile.soap.lib +++ b/src/serial/soap/Makefile.soap.lib @@ -8,3 +8,5 @@ SRC = soap_message soap_readhook soap_writehook soap_client \ LIB = xsoap WATCHERS = gouriano + +DLL_LIB = xncbi xutil xser xconnect diff --git a/src/serial/soap/Makefile.soap_server.lib b/src/serial/soap/Makefile.soap_server.lib index c961496..0ccb2f0 100644 --- a/src/serial/soap/Makefile.soap_server.lib +++ b/src/serial/soap/Makefile.soap_server.lib @@ -9,3 +9,5 @@ LIB = xsoap_server REQUIRES = cgi WATCHERS = gouriano + +DLL_LIB = xncbi xutil xcgi xsoap xser diff --git a/src/serial/test/Makefile.we_cpp.lib b/src/serial/test/Makefile.we_cpp.lib index 9877691..599ef5d 100644 --- a/src/serial/test/Makefile.we_cpp.lib +++ b/src/serial/test/Makefile.we_cpp.lib @@ -3,3 +3,4 @@ SRC = we_cpp__ we_cpp___ WATCHERS = gouriano +DLL_LIB = xncbi xutil xser diff --git a/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib b/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib index 4896661..8e2ad56 100644 --- a/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib +++ b/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib @@ -12,7 +12,7 @@ ASN_DEP = seqset seq LIB_OR_DLL = both -DLL_LIB = $(SOBJMGR_LIBS) bamread$(STATIC) $(BAM_LIBS) $(CMPRS_LIB) +DLL_LIB = $(SOBJMGR_LIBS) bamread$(STATIC) $(BAM_LIBS) $(CMPRS_LIB) xobjreadex LIBS = $(CMPRS_LIBS) $(ORIG_LIBS) CPPFLAGS = $(SRA_INCLUDE) -DNCBI_XLOADER_BAM_EXPORTS $(ORIG_CPPFLAGS) diff --git a/src/sra/sdk/libs/align/Makefile.align-writer.lib b/src/sra/sdk/libs/align/Makefile.align-writer.lib index a7c4e77..0f39423 100644 --- a/src/sra/sdk/libs/align/Makefile.align-writer.lib +++ b/src/sra/sdk/libs/align/Makefile.align-writer.lib @@ -7,7 +7,7 @@ SRC = dna-reverse-cmpl reader-cmn reference-cmn reader-refseq refseq-mgr \ writer-cmn writer-refseq writer-alignment writer-sequence writer-ref \ writer-reference -DLL_LIB = wvdb wkdb kfg kfs klib $(Z_LIB) +DLL_LIB = wvdb wkdb kfg kfs klib kapp $(Z_LIB) LIBS = $(Z_LIBS) $(ORIG_LIBS) CPPFLAGS = $(SRA_INCLUDE) $(SRA_INTERNAL_CPPFLAGS) -D_LIBRARY $(ORIG_CPPFLAGS) diff --git a/src/util/Makefile.util.lib b/src/util/Makefile.util.lib index bb93ec9..d1b2737 100644 --- a/src/util/Makefile.util.lib +++ b/src/util/Makefile.util.lib @@ -14,3 +14,5 @@ PROJ_TAG = core LIBS = $(ORIG_LIBS) WATCHERS = vakatov + +DLL_LIB = xncbi diff --git a/src/util/compress/api/Makefile.compress.lib b/src/util/compress/api/Makefile.compress.lib index ae22234..2ce803a 100644 --- a/src/util/compress/api/Makefile.compress.lib +++ b/src/util/compress/api/Makefile.compress.lib @@ -6,7 +6,7 @@ LIB = xcompress CPPFLAGS = $(ORIG_CPPFLAGS) $(CMPRS_INCLUDE) -DLL_LIB = $(BZ2_LIB) $(Z_LIB) $(LZO_LIB) +DLL_LIB = $(BZ2_LIB) $(Z_LIB) $(LZO_LIB) xutil xncbi LIBS = $(BZ2_LIBS) $(Z_LIBS) $(LZO_LIBS) WATCHERS = ivanov diff --git a/src/util/qparse/Makefile.xqueryparse.lib b/src/util/qparse/Makefile.xqueryparse.lib index a003930..0505da7 100644 --- a/src/util/qparse/Makefile.xqueryparse.lib +++ b/src/util/qparse/Makefile.xqueryparse.lib @@ -7,3 +7,5 @@ query_parser_bison.tab.c : query_parser_bison.y bison -v -p ncbi_q_ -o query_parser_bison.tab.c query_parser_bison.y WATCHERS = kuznets + +DLL_LIB = xncbi xutil diff --git a/src/util/regexp/Makefile.regexp.lib b/src/util/regexp/Makefile.regexp.lib index 0f8d5e8..83a82af 100644 --- a/src/util/regexp/Makefile.regexp.lib +++ b/src/util/regexp/Makefile.regexp.lib @@ -10,3 +10,5 @@ LIB = regexp CPPFLAGS = -I$(includedir)/util/regexp -DHAVE_CONFIG_H $(ORIG_CPPFLAGS) WATCHERS = ivanov + +DLL_LIB = xncbi xutil diff --git a/src/util/sequtil/Makefile.sequtil.lib b/src/util/sequtil/Makefile.sequtil.lib index c068a32..453c911 100644 --- a/src/util/sequtil/Makefile.sequtil.lib +++ b/src/util/sequtil/Makefile.sequtil.lib @@ -4,3 +4,5 @@ LIB = sequtil SRC = sequtil sequtil_convert sequtil_convert_imp sequtil_manip sequtil_tables sequtil_shared WATCHERS = shomrat + +DLL_LIB = xncbi xutil diff --git a/src/util/xregexp/Makefile.xregexp.lib b/src/util/xregexp/Makefile.xregexp.lib index 965fac4..3accea3 100644 --- a/src/util/xregexp/Makefile.xregexp.lib +++ b/src/util/xregexp/Makefile.xregexp.lib @@ -6,7 +6,7 @@ LIB = xregexp CPPFLAGS = $(ORIG_CPPFLAGS) $(PCRE_INCLUDE) -DLL_LIB = $(PCRE_LIB) +DLL_LIB = $(PCRE_LIB) xutil xncbi LIBS = $(PCRE_LIBS) WATCHERS = ivanov