diff -Naur apbs-0.4.0/examples/born/runme apbs-0.4.0-new/examples/born/runme --- apbs-0.4.0/examples/born/runme 2002-08-13 14:35:41.000000000 +0000 +++ apbs-0.4.0-new/examples/born/runme 2006-03-09 03:15:09.000000000 +0000 @@ -8,5 +8,5 @@ echo "Generating ion with $i radius..." echo "ATOM 1 I ION 1 0.000 0.000 0.000 1.00 $i" \ > ion.pqr - ${bindir}/apbs apbs.in > OUTPUT-${i} 2>&1 + /usr/bin/apbs apbs.in > OUTPUT-${i} 2>&1 done diff -Naur apbs-0.4.0/examples/ion-pmf/runme apbs-0.4.0-new/examples/ion-pmf/runme --- apbs-0.4.0/examples/ion-pmf/runme 2002-08-13 14:35:41.000000000 +0000 +++ apbs-0.4.0-new/examples/ion-pmf/runme 2006-03-09 03:16:11.000000000 +0000 @@ -14,5 +14,5 @@ echo "ATOM 1 I ION 1 $i 0.000 0.000 1.00 2.00"\ > mol2.pqr cat mol1.pqr mol2.pqr > complex.pqr - ${bindir}/apbs apbs.in > OUTPUT_${i} 2>&1 + /usr/bin/apbs apbs.in > OUTPUT_${i} 2>&1 done diff -Naur apbs-0.4.0/examples/point-pmf/runme.sh apbs-0.4.0-new/examples/point-pmf/runme.sh --- apbs-0.4.0/examples/point-pmf/runme.sh 2004-02-12 17:14:02.000000000 +0000 +++ apbs-0.4.0-new/examples/point-pmf/runme.sh 2006-03-09 03:17:11.000000000 +0000 @@ -20,5 +20,5 @@ echo "ATOM 1 I ION 1 $i 0.000 0.000 1.00 0.00"\ > mol2.pqr cat mol1.pqr mol2.pqr > complex.pqr - ${bindir}/apbs apbs.in > OUTPUT_${i} 2>&1 + /usr/bin/apbs apbs.in > OUTPUT_${i} 2>&1 done