# ChangeLog for sci-chemistry/ccp4 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ *ccp4-6.1.3 (22 Dec 2009) 22 Dec 2009; Justin Lecher (jlec) +ccp4-6.1.3.ebuild: Version bump Added sci-chemistry/sfcheck to RDEPEND fixed depending onto ~foo/bar-${PV} for ccp4 stuff 17 Nov 2009; Justin Lecher (jlec) ccp4-6.1.2-r1.ebuild: oasis4 USE removed again *ccp4-6.1.2-r1 (15 Nov 2009) 15 Nov 2009; Justin Lecher (jlec) +ccp4-6.1.2-r1.ebuild: added oasis-4 support EAPI="2" 16 Aug 2009; Justin Lecher (jlec) ccp4-6.1.2.ebuild: sci-chemistry/mrbump dependency added 15 Aug 2009; Justin Lecher (jlec) ccp4-6.1.2.ebuild, metadata.xml: USE db renamed to balbesdb as suggested by Donnie and Afrever *ccp4-6.1.1-r7 (14 Aug 2009) 14 Aug 2009; Justin Lecher (jlec) +ccp4-6.1.1-r7.ebuild: make balbes-db optionall as requested by Donnie *ccp4-6.1.1-r6 (07 Jul 2009) 03 Aug 2009; Justin Lecher (jlec) +ccp4-6.1.2.ebuild: transmission ccp4 --> ccp4-apps and ccp4 as meta package 03 Aug 2009; Justin Lecher (jlec) -ccp4-6.1.1.ebuild, -ccp4-6.1.1-r1.ebuild, -ccp4-6.1.1-r3.ebuild, -ccp4-6.1.1-r4.ebuild, -ccp4-6.1.1-r5.ebuild: Cleanup old versions *ccp4-6.1.1-r6 (07 Jul 2009) 07 Jul 2009; Justin Lecher (jlec) +ccp4-6.1.1-r6.ebuild: resort DEPENDENCIES *ccp4-6.1.1-r5 (05 Jul 2009) 05 Jul 2009; Justin Lecher (jlec) +files/6.1.1-noxia.patch, +ccp4-6.1.1-r5.ebuild: noxia patch 02 Jul 2009; Justin Lecher (jlec) ccp4-6.1.1-r4.ebuild: userpriv usersandbox fix *ccp4-6.1.1-r4 (01 Jul 2009) 01 Jul 2009; Justin Lecher (jlec) -ccp4-6.1.1-r2.ebuild, +ccp4-6.1.1-r4.ebuild: first patch from upstram -- ctruncate removed old version *ccp4-6.1.2 (01 Jul 2009) 01 Jul 2009; Justin Lecher (jlec) +files/6.1.2-clipper-mmdbold-ggc-4.3.patch, +files/6.1.2-dont-build-double-and-make-bindir.patch, +files/6.1.2-dont-build-libs.patch, +files/6.1.2-dont-make-dirs-in-configure.patch, +files/6.1.2-fix-setup-bash-incompatibility.patch, +files/6.1.2-nomolref.patch, +files/6.1.2-rename-rapper.patch, +ccp4-6.1.2.ebuild, +files/6.1.2-rename-truncate.patch: new upstream release *ccp4-6.1.1-r3 (11 Jun 2009) 11 Jun 2009; Justin Lecher (jlec) +files/6.1.1-nomolref.patch, +ccp4-6.1.1-r3.ebuild: We don't wat to install molref, because it is not provided as source and linked against icc 11 Jun 2009; Justin Lecher (jlec) ccp4-6.1.1-r2.ebuild: examples are now optional vie USE="examples" *ccp4-6.1.1-r2 (03 Jun 2009) 03 Jun 2009; Justin Lecher (jlec) +ccp4-6.1.1-r2.ebuild: glibc-2.10 getline fix *ccp4-6.1.1-r1 (13 May 2009) 13 May 2009; Justin Lecher (jlec) +ccp4-6.1.1-r1.ebuild: Including updates from upstream 03/04/09 fixing bug 269504 27 Mar 2009; Justin Lecher (jlec) ccp4-6.1.1.ebuild: removed !media-libs/raptor as collision is fixed 12 Mar 2009; Justin Lecher (jlec) ChangeLog: rapper conflict with media-libs/raptor resolved 03 Jun 2008; Michael Sterrett ccp4-6.0.1-r1.ebuild, ccp4-6.0.2.ebuild, ccp4-6.0.2-r1.ebuild: remove reference to app-shells/csh which has been removed 14 Apr 2008; Donnie Berkholz ; ccp4-6.0.2-r1.ebuild: Install examples (Justin Lecher). 13 Apr 2008; Donnie Berkholz ; ccp4-6.0.2-r1.ebuild: Try harder to remove rasmol man pages (Justin Lecher). 08 Apr 2008; Donnie Berkholz ; ccp4-6.0.2-r1.ebuild: Remove message about sourcing setup scripts. *ccp4-6.0.2-r1 (08 Apr 2008) 08 Apr 2008; Donnie Berkholz ; +files/6.0.2-gcc-4.1.2-idate-fix.patch, +ccp4-6.0.2-r1.ebuild: (#175630, #201150) Fix build. Install setup scripts into /etc/profile.d/ so they're sourced automatically upon login. In setup scripts, don't use CLIBD before it's been set. Update to latest upstream patches. Deal with non-gzip compression types. 22 Jul 2007; Donnie Berkholz ; ccp4-6.0.1-r1.ebuild: Drop virtual/x11 references. 02 Jul 2007; Piotr Jaroszyński ccp4-6.0.1-r1.ebuild, ccp4-6.0.2.ebuild: (QA) RESTRICT clean up. 07 Apr 2007; Mike Frysinger ccp4-6.0.1-r1.ebuild, ccp4-6.0.2.ebuild: Convert *DESTTREE abuse into proper calls to the *into functions. 15 Mar 2007; Danny van Dyk ccp4-6.0.1-r1.ebuild, ccp4-6.0.2.ebuild: QA: Removed illegal use of ${ROOT}. Bug #168043 06 Jan 2007; Danny van Dyk -ccp4-6.0.1.ebuild: QA: Removed unused versions. *ccp4-6.0.2 (24 Nov 2006) 24 Nov 2006; Donnie Berkholz ; +files/6.0.2-dont-make-dirs-in-configure.patch, +files/6.0.2-ppc-double-define-gerror.patch, +ccp4-6.0.2.ebuild: Bump. 26 Sep 2006; Donnie Berkholz ; ccp4-6.0.1-r1.ebuild: Stable on x86/ppc. 20 Sep 2006; Donnie Berkholz ; metadata.xml: (#148281) Change herd to sci-chemistry from sci. *ccp4-6.0.1-r1 (07 Aug 2006) 07 Aug 2006; Donnie Berkholz ; +ccp4-6.0.1-r1.ebuild: Add upstream patches. The build system won't accept LDFLAGS, so unset them. (#142183) Source the setup script again in src_install() to make sure CBIN and CCP4_LIB get set. Not doing this breaks USE=X because the Imakefiles use them. Stop changing the value of CCP4_LIB, that was only necessary for the bindir=/usr/bin, libdir=/usr/libdir install, which was too much work. 05 Aug 2006; Donnie Berkholz ; metadata.xml: Remove myself as maintainer, anyone feel free to work on this, although I'll continue to do so as well. 07 Jul 2006; Donnie Berkholz ; metadata.xml: Update to my new email address. *ccp4-6.0.1 (16 Jun 2006) 16 Jun 2006; Donnie Berkholz ; +files/6.0.1-dont-make-dirs-in-configure.patch, +files/6.0.1-ppc-double-define-gerror.patch, +files/ccp4i-default-to-firefox.patch, +files/check-blas-lapack-pthread.patch, +files/clipper-find-mccp4-includes.patch, +files/create-mosflm-bindir.patch, +files/dont-build-rasmol.patch, +files/make-ipmosflm-dir.patch, +files/make-mosflm-cbf-libdir.patch, +files/make-mosflm-index-libdir.patch, +files/make-mosflm-libdir.patch, +files/pass-clipper-enablevals.patch, +metadata.xml, +ccp4-6.0.1.ebuild: Add CCP4, a popular protein X-ray crystallography toolkit. Relies on portage auto-fixing RPATHs for now, because its build system consists of a bunch of stuff thrown together into the same tarball.