# Copyright 1999-2010 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: $ EAPI="2" inherit autotools base versionator subversion MY_S2_PV=$(replace_version_separator 2 - ${PV}) MY_S2_P=${PN}-${MY_S2_PV/pre1/pre-1} MY_S_P=${MY_S2_P}-${PR/r/revision-} MY_PV=${PV} MY_P=${PN}-${MY_PV} ESVN_REPO_URI="http://coot.googlecode.com/svn/trunk" DESCRIPTION="Crystallographic Object-Oriented Toolkit for model building, completion and validation" HOMEPAGE="http://www.biop.ox.ac.uk/coot/" SRC_URI="test? ( http://www.biop.ox.ac.uk/coot/devel/greg-data.tar.gz )" SLOT="0" LICENSE="GPL-3" KEYWORDS="~amd64 ~x86" IUSE="test" SCIDEPS=" >=sci-libs/ccp4-libs-6.1 >=sci-libs/clipper-20090520 >=sci-libs/coot-data-2 >=sci-libs/gsl-1.3 sci-chemistry/reduce sci-chemistry/refmac sci-chemistry/probe" XDEPS=" gnome-base/libgnomecanvas gnome-base/librsvg media-libs/libpng virtual/glut >=x11-libs/gtk+-2.2 x11-libs/gtkglext" SCHEMEDEPS=" dev-scheme/net-http dev-scheme/guile-gui >=dev-scheme/guile-lib-0.1.6 dev-scheme/guile-www =x11-libs/guile-gtk-2.1" RDEPEND=" ${SCIDEPS} ${XDEPS} ${SCHEMEDEPS} dev-python/pygtk >=dev-libs/gmp-4.2.2-r2 >=net-misc/curl-7.19.6 net-dns/libidn" DEPEND="${RDEPEND} dev-lang/swig test? ( dev-scheme/greg )" S="${WORKDIR}" PATCHES=( "${FILESDIR}"/${PV}-rappermc.patch ) src_unpack() { subversion_src_unpack use test && unpack ${A} } src_prepare() { base_src_prepare # Link against single-precision fftw sed -i \ -e "s:lfftw:lsfftw:g" \ -e "s:lrfftw:lsrfftw:g" \ "${S}"/macros/clipper.m4 || die cat >> src/svn-revision.cc <<- EOF extern "C" { int svn_revision() { return ${ESVN_WC_REVISION}; } } EOF eautoreconf } src_configure() { # All the --with's are used to activate various parts. # Yes, this is broken behavior. econf \ --includedir='${prefix}/include/coot' \ --with-gtkcanvas-prefix=/usr \ --with-clipper-prefix=/usr \ --with-mmdb-prefix=/usr \ --with-ssmlib-prefix=/usr \ --with-gtkgl-prefix=/usr \ --with-guile \ --with-python=/usr \ --with-guile-gtk \ --with-gtk2 \ --with-pygtk } src_compile() { emake || die "emake failed" cp "${S}"/src/coot.py python/ || die } src_test() { mkdir "${T}"/coot_test export COOT_STANDARD_RESIDUES="${S}/standard-residues.pdb" export COOT_SCHEME_DIR="${S}/scheme/" export COOT_RESOURCES_FILE="${S}/cootrc" export COOT_PIXMAPS_DIR="${S}/pixmaps" export COOT_DATA_DIR="${S}" export COOT_PYTHON_DIR="${S}/python" export PYTHONPATH="${COOT_PYTHON_DIR}:${PYTHONPATH}" export PYTHONHOME=/usr export CCP4_SCR="${T}"/coot_test export COOT_TEST_DATA_DIR="${S}"/data/greg-data cat > command-line-greg.scm <<- EOF (use-modules (ice-9 greg)) (set! greg-tools (list "greg-tests")) (set! greg-debug #t) (set! greg-verbose 5) (let ((r (greg-test-run))) (if r (coot-real-exit 0) (coot-real-exit 1))) EOF einfo "Running test with following paths ..." einfo "COOT_STANDARD_RESIDUES $COOT_STANDARD_RESIDUES" einfo "COOT_SCHEME_DIR $COOT_SCHEME_DIR" einfo "COOT_RESOURCES_FILE $COOT_RESOURCES_FILE" einfo "COOT_PIXMAPS_DIR $COOT_PIXMAPS_DIR" einfo "COOT_DATA_DIR $COOT_DATA_DIR" einfo "COOT_PYTHON_DIR $COOT_PYTHON_DIR" einfo "PYTHONPATH $PYTHONPATH" einfo "PYTHONHOME $PYTHONHOME" einfo "CCP4_SCR ${CCP4_SCR}" "${S}"/src/coot-real --no-graphics --script command-line-greg.scm || die }