# ChangeLog for sci-chemistry/refmac # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ *refmac-5.6.0050 (16 Jan 2010) 16 Jan 2010; Justin Lecher (jlec) -refmac-5.6.0046.ebuild, +refmac-5.6.0050.ebuild: Version Bump *refmac-5.6.0046 (03 Jan 2010) 03 Jan 2010; Justin Lecher (jlec) files/5.6-allow-dynamic-linking.patch, -refmac-5.6.0041.ebuild, +refmac-5.6.0046.ebuild: Version Bump *refmac-5.5.0109 (20 Oct 2009) 20 Oct 2009; Justin Lecher (jlec) +refmac-5.5.0109.ebuild: version bump *refmac-5.5.0108 (17 Oct 2009) 17 Oct 2009; Justin Lecher (jlec) +refmac-5.5.0108.ebuild: version bump *refmac-5.5.0107 (14 Oct 2009) 14 Oct 2009; Justin Lecher (jlec) refmac-5.5.0102.ebuild, refmac-5.5.0105.ebuild, refmac-5.5.0106.ebuild, +refmac-5.5.0107.ebuild, refmac-5.6.0041.ebuild: version bump QA on missing sci-libs/mmdb RDEPEND *refmac-5.5.0106 (11 Oct 2009) 11 Oct 2009; Justin Lecher (jlec) +refmac-5.5.0106.ebuild: version bump *refmac-5.5.0105 (05 Oct 2009) 05 Oct 2009; Justin Lecher (jlec) -refmac-5.5.0104.ebuild, +refmac-5.5.0105.ebuild: version bump 5.5.104 segf but 5.5.105 fixes it *refmac-5.5.0102 (07 Jul 2009) 07 Jul 2009; Justin Lecher (jlec) +refmac-5.5.0102.ebuild: version bump test fixed *refmac-5.5.0101 (30 Jun 2009) 30 Jun 2009; Justin Lecher (jlec) +refmac-5.5.0101.ebuild: bump *refmac-5.5.0100-r1 (29 Jun 2009) 29 Jun 2009; Justin Lecher (jlec) +refmac-5.5.0100-r1.ebuild, +files/test.log.patch: EAPI=2 and adv test *refmac-5.5.0100 (29 Jun 2009) 29 Jun 2009; Justin Lecher (jlec) +refmac-5.5.0100.ebuild: version bump, still segf on testframework *refmac-5.6.0041 (25 Jun 2009) 25 Jun 2009; Justin Lecher (jlec) refmac-5.5.0098-r1.ebuild, refmac-5.5.0099-r1.ebuild, -refmac-5.6.0033.ebuild, -refmac-5.6.0039.ebuild, -refmac-5.6.0040.ebuild, +refmac-5.6.0041.ebuild: version bump of unstable refmac-5.5.0099-r1 does not clearly run all tests -- bug or bad testcase? *refmac-5.5.0099-r1 (24 Jun 2009) *refmac-5.5.0098-r1 (24 Jun 2009) 24 Jun 2009; Justin Lecher (jlec) +refmac-5.5.0098-r1.ebuild, +refmac-5.5.0099-r1.ebuild, +files/twin.inp: test added *refmac-5.6.0040 (23 Jun 2009) 23 Jun 2009; Justin Lecher (jlec) +refmac-5.6.0040.ebuild: experimental version bump *refmac-5.6.0039 (23 Jun 2009) 23 Jun 2009; Justin Lecher (jlec) -refmac-5.6.0038.ebuild, +refmac-5.6.0039.ebuild: experimental version bump and changed to MAJOR.MINOR versioned patches *refmac-5.5.0099 (23 Jun 2009) 23 Jun 2009; Justin Lecher (jlec) +refmac-5.5.0099.ebuild: In cases of twin if the program first decided that there are many twin operators (e.g. four) and later removed some of these operators (e.g. the number of remaining twin domains is two) then highest resolution was not always correct. It was related with the fact the the resolution the program works with is the highest resolution after applying all twin operators. If twin is not merohedral then this resolution may be different from actual resolution of the data. This bug has now been fixed. *refmac-5.5.0098 (22 Jun 2009) 22 Jun 2009; Justin Lecher (jlec) +files/5.5-allow-dynamic-linking.patch, +refmac-5.5.0098.ebuild: version bump and switch MAJOR.MINOR patches *refmac-5.6.0038 (19 Jun 2009) 19 Jun 2009; Justin Lecher (jlec) -files/5.6.0036-allow-dynamic-linking.patch, -refmac-5.6.0036.ebuild, +files/5.6.0038-allow-dynamic-linking.patch, +refmac-5.6.0038.ebuild: unstable version bump and dep for new monomer-db *refmac-5.5.0097 (08 Jun 2009) 08 Jun 2009; Justin Lecher (jlec) +files/5.5.0097-allow-dynamic-linking.patch, refmac-5.5.0095.ebuild, +refmac-5.5.0097.ebuild, refmac-5.6.0036.ebuild: version bump and QA of the last QA 05 Jun 2009; Justin Lecher (jlec) refmac-5.5.0095.ebuild, refmac-5.6.0036.ebuild: make it more straight *refmac-5.6.0036 (03 Jun 2009) 03 Jun 2009; Justin Lecher (jlec) -files/5.6.0034-allow-dynamic-linking.patch, -refmac-5.6.0034.ebuild, +files/5.6.0036-allow-dynamic-linking.patch, +refmac-5.6.0036.ebuild: experimental version bumped *refmac-5.6.0034 (29 May 2009) 29 May 2009; Justin Lecher (jlec) -files/5.6.0031-allow-dynamic-linking.patch, -refmac-5.6.0031.ebuild, +files/5.6.0034-allow-dynamic-linking.patch, +refmac-5.6.0034.ebuild: experimental version bumped *refmac-5.5.0095 (29 May 2009) 29 May 2009; Justin Lecher (jlec) -refmac-5.5.0094.ebuild, +refmac-5.5.0095.ebuild: A bug related with cubic space group has been fixed. In some cases cubic space refinement would not work because the maximum indices were determined incorrectly. *refmac-5.5.0094 (26 May 2009) 26 May 2009; Justin Lecher (jlec) -files/5.5.0093-allow-dynamic-linking.patch, -refmac-5.5.0093.ebuild, +files/5.5.0094-allow-dynamic-linking.patch, +refmac-5.5.0094.ebuild: A problem related with TLS has been fixed. The problem was that not in all cycle TLS contributions were added to B values and that could make refinement unstable. *refmac-5.5.0093 (22 May 2009) 22 May 2009; Justin Lecher (jlec) +files/5.5.0093-allow-dynamic-linking.patch, -refmac-5.5.0090.ebuild, +refmac-5.5.0093.ebuild: A problem related with TLS has been fixed. The problem was that not in all cycle TLS contributions were added to B values and that could make refinement unstable. *refmac-5.5.0092 (18 May 2009) 18 May 2009; Justin Lecher (jlec) -files/5.5.0091-allow-dynamic-linking.patch, -refmac-5.5.0091.ebuild, +files/5.5.0092-allow-dynamic-linking.patch, +refmac-5.5.0092.ebuild: version bump to 5.5.0092 A problem related with TLS has been fixed. The problem was that not in all cycle TLS contributions were added to B values and that could make refinement unstable. *refmac-5.6.0033 (05 May 2009) 05 May 2009; Justin Lecher (jlec) +files/5.6.0033-allow-dynamic-linking.patch, +refmac-5.6.0033.ebuild: refmac experimantel version bump *refmac-5.6.0031 (28 Apr 2009) *refmac-5.5.0091 (28 Apr 2009) 28 Apr 2009; Justin Lecher (jlec) -files/5.5.0088-allow-dynamic-linking.patch, -files/5.5.0089-allow-dynamic-linking.patch, -files/5.6.0030-allow-dynamic-linking.patch, +files/5.6.0031-allow-dynamic-linking.patch, -refmac-5.5.0088.ebuild, -refmac-5.5.0089.ebuild, +refmac-5.5.0091.ebuild, -refmac-5.6.0030.ebuild, +refmac-5.6.0031.ebuild: version bumps to latest and clean up of old versions *refmac-5.6.0027 (26 Apr 2009) 26 Apr 2009; Justin Lecher (jlec) +files/5.6.0027-allow-dynamic-linking.patch, +refmac-5.6.0027.ebuild: experimental versions added *refmac-5.5.0090 (14 Apr 2009) 14 Apr 2009; Justin Lecher (jlec) +files/5.5.0090-allow-dynamic-linking.patch, +refmac-5.5.0090.ebuild: version bump fixes prossible segf *refmac-5.5.0089 (13 Mar 2009) 13 Mar 2009; Justin Lecher (jlec) -refmac-5.5.0046.ebuild, -refmac-5.5.0085.ebuild, +refmac-5.5.0089.ebuild: bumped to 5.5.0089 cleaned up old versions *refmac-5.5.0088 (26 Feb 2009) 26 Feb 2009; Justin Lecher (jlec) +files/5.5.0088-allow-dynamic-linking.patch, +refmac-5.5.0088.ebuild: version bump to 5.5.0088 18 Feb 2009; Justin Lecher (jlec) +sci-chemistry/refmac-5.5.0085.ebuild +sci-chemistry/refmac/files/5.5.0085-allow-dynamic-linking.patch: bumped to revision 0085