# Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 EAPI="3" inherit autotools eutils multilib toolchain-funcs DESCRIPTION="Find total energy, charge density and electronic structure using density functional theory" HOMEPAGE="http://www.abinit.org/" SRC_URI="http://ftp.abinit.org/${P}.tar.gz" LICENSE="GPL-2" SLOT="0" KEYWORDS="~amd64 ~ppc ~x86" IUSE="cuda -debug +fftw +fox gsl +hdf5 mpi +netcdf python -smp +threads -test -vdwxc" RDEPEND="=sci-libs/bigdft-1.2.0.2 sci-libs/etsf_io =sci-libs/libxc-1.0[fortran] fox? ( sci-libs/fox[dom,sax,wcml,wxml] ) netcdf? ( sci-libs/netcdf[fortran] hdf5? ( sci-libs/netcdf[fortran,hdf5] ) ) hdf5? ( sci-libs/hdf5[fortran] ) sci-libs/wannier90 virtual/blas virtual/lapack gsl? ( sci-libs/gsl ) fftw? ( sci-libs/fftw:2.1 threads? ( sci-libs/fftw:2.1[threads] ) ) mpi? ( virtual/mpi ) python? ( dev-python/numpy ) cuda? ( dev-util/nvidia-cuda-sdk )" DEPEND="${RDEPEND} dev-util/pkgconfig dev-perl/Text-Markdown" WANT_AUTOCONF="latest" WANT_AUTOMAKE="latest" S=${WORKDIR}/${P%[a-z]} pkg_setup() { # Doesn't compile with gcc-4.0, only >=4.1 if [[ $(tc-getFC) == *gfortran ]]; then if [[ $(gcc-major-version) -eq 4 ]] \ && [[ $(gcc-minor-version) -lt 1 ]]; then die "Requires gcc-4.1 or newer" fi fi } src_prepare() { epatch "${FILESDIR}"/6.2.2-change-default-directories.patch epatch "${FILESDIR}"/6.2.2-configure-fortran-calls.patch epatch "${FILESDIR}"/6.0.3-fftw.patch epatch "${FILESDIR}"/6.2.2-non-plugin-libs.patch epatch "${FILESDIR}"/6.4.2-openmp.patch # To compile against libxc-1.0 or the current SVN HEAD: epatch "${FILESDIR}"/6.0.3-libxc-flags.patch eautoreconf find "${S}" -type f -exec grep -q -- '-llibxc' {} \; \ -exec sed -i -e's/-llibxc/-lxc/g' {} \; } src_configure() { local libs="-L/usr/$(get_libdir)" local modules="-I/usr/$(get_libdir)/finclude" local FoX_libs="${libs} -lFoX_dom -lFoX_sax -lFoX_wcml -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys" local trio_flavor="etsf" use fox && trio_flavor="${trio_flavor}+fox" use hdf5 && trio_flavor="${trio_flavor}+hdf" use netcdf && trio_flavor="${trio_flavor}+netcdf" local netcdff_libs="-lnetcdff" use hdf5 && netcdff_libs="${netcdff_libs} -lhdf5_fortran" local trio_libs="-letsf_io -letsf_io_low_level -letsf_io_utils" use fox && trio_libs="${trio_libs} ${FoX_libs}" use netcdf && trio_libs="${trio_libs} $(pkg-config --libs netcdf) -lnetcdff" use hdf5 && trio_libs="${trio_libs} -lhdf5_fortran" local fft_flavor="fftw2" local fft_libs="-L/usr/lib" if use threads; then fft_libs="${fft_libs} -lfftw_threads" fft_flavor="fftw2-threads" fi fft_libs="${fft_libs} -lfftw -lrt -lm" if use mpi; then MY_FC="mpif90" MY_CC="mpicc" MY_CXX="mpic++" else MY_FC="$(tc-getFC)" MY_CC="$(tc-getCC)" MY_CXX="$(tc-getCXX)" fi if use smp; then MY_FC="${MY_FC} -fopenmp" MY_CC="${MY_CC} -fopenmp" MY_CXX="${MY_CXX} -fopenmp" fi MARKDOWN=Markdown.pl econf \ $(use_enable debug debug enhanced) \ $(use_enable mpi) \ $(use_enable mpi mpi-io) \ $(use_enable smp) \ $(use_enable fox) \ $(use_enable gsl math) \ $(use_enable fftw fft) \ $(use_enable vdwxc) \ $(use_enable cuda gpu) \ "$(use cuda && echo "--with-gpu-flavor=cuda-single")" \ "$(use cuda && echo "--with-gpu-prefix=/opt/cuda/")" \ "$(use gsl && echo "--with-math-flavor=gsl")" \ "$(use gsl && echo "--with-math-includes=$(pkg-config --cflags gsl)")" \ "$(use gsl && echo "--with-math-libs=$(pkg-config --libs gsl)")" \ --enable-linalg \ --enable-trio \ --enable-etsf-io \ --enable-dft \ --with-linalg-flavor="atlas" \ --with-linalg-libs="$(pkg-config --libs lapack)" \ --with-trio-flavor="${trio_flavor}" \ "$(use netcdf && echo "--with-netcdf-includes=-I/usr/include")" \ "$(use netcdf && echo "--with-netcdf-libs=$(pkg-config --libs netcdf) ${netcdff_libs}")" \ "$(use fox && echo "--with-fox-includes=${modules}")" \ "$(use fox && echo "--with-fox-libs=${FoX_libs}")" \ --with-etsf-io-includes="${modules}" \ --with-etsf-io-libs="${libs} -letsf_io -letsf_io_low_level -letsf_io_utils" \ --with-trio-includes="-I/usr/include ${modules}" \ --with-trio-libs="${trio_libs}" \ --with-dft-flavor="libxc+bigdft+wannier90" \ --with-libxc-includes="${modules}" \ --with-libxc-libs="${libs} -lxc" \ --with-bigdft-includes="${modules}" \ --with-bigdft-libs="${libs} -lpoissonsolver -lbigdft" \ --with-wannier90="/usr/bin/wannier90.x" \ --with-wannier90-includes="${modules}" \ --with-wannier90-libs="${libs} -lwannier $(pkg-config --libs lapack)" \ --with-dft-includes="${modules}" \ --with-dft-libs="${libs} -lwannier -lpoissonsolver -lbigdft -lxc $(pkg-config --libs lapack)" \ "$(use fftw && echo "--with-fft-flavor=${fft_flavor}")" \ "$(use fftw && echo "--with-fft-includes=-I/usr/include")" \ "$(use fftw && echo "--with-fft-libs=${fft_libs}")" \ --with-timer-flavor="abinit" \ FC="${MY_FC}" \ CC="${MY_CC}" \ CXX="${MY_CXX}" \ LD="$(tc-getLD)" \ FCFLAGS="${FCFLAGS:- ${FFLAGS:- -O2}} ${modules}" } src_compile() { # if use mpi; then # emake multi || die # else emake || die # fi } src_test() { einfo "The tests take quite a while, on the order of 1-2 hours" einfo "on an Intel Penryn (2.5 GHz)." cd "${S}"/tests emake tests_min emake tests_paw emake tests_gw emake tests_gw_paw emake tests tdft emake tests_bench local REPORT for REPORT in $(find . -name report); do REPORT=${REPORT#*/} elog "Parameters and unusual results for ${REPORT%%/*} tests" echo "Parameters and unusual results for ${REPORT%%/*} tests" >>tests_summary.txt while read line; do elog "${line}" echo "${line}" >>tests_summary.txt done \ < <(grep -v -e succeeded -e passed ${REPORT}) done local testdir find . -name ",,test*" -print | \ while read testdir; do if [ -e summary_tests.tar ]; then tar rvf summary_tests.tar ${testdir} else tar cvf summary_tests.tar ${testdir} fi done elog "The full test results will be installed as summary_tests.tar.bz2." elog "Also a concise report tests_summary.txt is installed." } src_install() { emake DESTDIR="${D}" install || die "make install failed" if use test; then dodoc tests/tests_summary.txt || ewarn "Copying tests summary failed" dodoc tests/summary_tests.tar || ewarn "Copying tests results failed" fi dodoc KNOWN_PROBLEMS README || die "Copying doc files failed" } pkg_postinst() { if use test; then elog "The full test results will be installed as summary_tests.tar.bz2." elog "Also a concise report tests_summary.txt is installed." fi }