#!/bin/bash DATE=$(date "+%Y%m%d") CHANGE_ENTRY="automatic bump" # Find the Documentation dir from sci overlay if [[ -f $(basename $0) ]]; then REPO_DOC=$(pwd) else REPO_DOC=$(dirname $0) fi cd /tmp; wget http://www.ncbi.nlm.nih.gov/blast/docs/update_blastdb.pl >& /dev/null # Ask for which database echo "Which db should be updated ?" echo "" perl -w update_blastdb.pl --passiv --showall echo "" read DB # Fetch the database and rename it perl -w update_blastdb.pl --passiv ${DB} for mydb in ${DB}*; do mv ${mydb} ${mydb#.tar.gz}-${DATE}.tar.gz done cd ${REPO_DOC}/../sci-libs/blast-db-${DB}; git mv blast-db-${DB}*ebuild blast-db-${DB}-${DATE}.ebuild git add . echangelog "${CHANGE_ENTRY}" reapoman -d -v fix git add .