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# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
inherit git-r3
DESCRIPTION="Scripts to run genome assembly scaffolding tools and analyse output for accuracy"
HOMEPAGE="https://github.com/martinghunt/Scaffolder-evaluation
http://genomebiology.com/2014/15/3/R42"
EGIT_REPO_URI="https://github.com/martinghunt/Scaffolder-evaluation.git"
LICENSE="GPL-3"
SLOT="0"
KEYWORDS=""
IUSE=""
DEPEND=""
RDEPEND="${DEPEND}
dev-lang/perl
dev-lang/python
dev-lang/R
media-gfx/graphviz
sci-biology/mummer
sci-biology/bowtie
sci-biology/samtools
sci-biology/ncbi-tools
sci-biology/Fastaq"
src_install(){
dobin Analysis-scripts/* Wrapper-scripts/*
dodoc README.md
}
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