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# ChangeLog for sci-biology/gbrowse
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
# $Id$
13 Nov 2014; Justin Lecher <jlec@gentoo.org> gbrowse-2.39.ebuild,
gbrowse-2.45.ebuild, gbrowse-2.48.ebuild:
Use perl virtuals instead of core
24 Sep 2014; Justin Lecher <jlec@gentoo.org> gbrowse-2.39.ebuild,
gbrowse-2.45.ebuild, gbrowse-2.48.ebuild, metadata.xml:
Bump to EAPI=5
22 May 2012; Justin Lecher <jlec@gentoo.org> gbrowse-2.39.ebuild,
gbrowse-2.45.ebuild, gbrowse-2.48.ebuild:
Add missing eutils.eclass, bump to EAPI=4, remove unnecessary bits
*gbrowse-2.48 (28 Feb 2012)
28 Feb 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
gbrowse-2.45.ebuild, +gbrowse-2.48.ebuild:
added dependency on <=sci-biology/primer3-2, per
http://generic-model-organism-system-database.450254.n5.nabble.com/PrimerDesi
gner-working-in-2-40-tp4724773p5479669.html
*gbrowse-2.45 (17 Jan 2012)
17 Jan 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+gbrowse-2.45.ebuild, +files/GBrowseInstall.pm-2.45.patch:
version bump and some fixes so that it works with webappconfig again?
17 Jan 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
gbrowse-2.39.ebuild:
added dev-perl/TermReadKey to dependencies
30 Jul 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
gbrowse-2.39.ebuild, +files/disable-gbrowse_metadb_config.pl.patch,
+files/gbrowse_metadb_config.pl.patch, +files/symlink.patch:
Make sure portage does not run gbrowse_metadb_config.pl otherwise sandbox
violation occurs when modifying /var/www/gbrowse2/databases/users.sqlite*
file, maybe we could copy these during src_install to the {}, fix there and
copy back to live filesystem? Improve error handling in
gbrowse_metadb_config.pl. Fix symlink creation during install procedure.
gbrowse-2.39.ebuild files/GBrowseInstall.pm-2.39.patch files/destdir.patch
files/disable-gbrowse_metadb_config.pl.patch files/fix-PNG-export.patch
files/gbrowse-slave.default files/gbrowse-slave.init.d
files/gbrowse.conf.vhosts.d files/gbrowse_metadb_config.pl.patch
files/symlink.patch
30 Jul 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
gbrowse-2.39.ebuild, +files/fix-PNG-export.patch:
sci-biology/gbrowse: add missing brackets cause a perl error while exporting
a PNG image gbrowse-2.39.ebuild files/fix-PNG-export.patch
30 Jul 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
gbrowse-2.39.ebuild, +files/destdir.patch:
added support for --destdir, patch sent to upstream gbrowse-2.39.ebuild
30 Jul 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
gbrowse-2.39.ebuild, +files/destdir.patch:
added support for --destdir, patch sent to upstream
30 Jul 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
-gbrowse-2.38.ebuild, -files/GBrowseInstall.pm-2.38.patch,
+gbrowse-2.39.ebuild, +files/GBrowseInstall.pm-2.39.patch:
version bump but still need to rewrite upstream's install procedure to
prevent 'mkdir /var/lib/gbrowse2' from happening
*gbrowse-2.39 (30 Jul 2011)
30 Jul 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
-gbrowse-2.38.ebuild, -files/GBrowseInstall.pm-2.38.patch,
+gbrowse-2.39.ebuild, +files/GBrowseInstall.pm-2.39.patch:
version bump but still need to rewrite upstream's install procedure to
prevent 'mkdir /var/lib/gbrowse2' from happening
08 Jul 2011; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
gbrowse-2.38.ebuild:
Added dependency on >=perl-gcpan/Text-ParseWords-3.27, documented requirement
of Bio::Root::Version >= 1.0069
*gbrowse-2.38 (26 Jun 2011)
26 Jun 2011; Justin Lecher <jlec@gentoo.org> -gbrowse-2.26.ebuild,
-files/GBrowseInstall.pm-2.26.patch,
-files/GBrowseInstall.pm-disable-gbrowse_metadb_config.pl.pm-2.26.patch,
-gbrowse-2.33.ebuild, -files/GBrowseInstall.pm-2.33.patch,
+gbrowse-2.38.ebuild, +files/GBrowseInstall.pm-2.38.patch:
Version Bump
25 Jun 2011; Justin Lecher <jlec@gentoo.org> -gbrowse-1.70.ebuild,
-gbrowse-2.00.ebuild, gbrowse-2.26.ebuild, gbrowse-2.33.ebuild:
Cleaned ebuild, 'http://search.cpan.org/CPAN' found in thirdpartymirrors
05 Feb 2010; Andrey Kislyuk <weaver@gentoo.org> ChangeLog:
Version bump
11 Oct 2009; Andrey Kislyuk <weaver@gentoo.org> ChangeLog:
Version bump, rewrite and rename to gbrowse
29 Jul 2007; Christian Heim <phreak@gentoo.org>
generic-genome-browser-1.58.ebuild:
Fixing the DEPEND/RDEPEND for the move of net-www/apache to
www-servers/apache (#78622).
23 Nov 2006; Francesco Riosa <vivo@gentoo.org>
generic-genome-browser-1.58.ebuild:
dev-db/mysql => virtual/mysql
14 Sep 2006; Olivier Fisette <ribosome@gentoo.org> metadata.xml:
Stepping down from maintaining this package.
13 Feb 2006; Michael Cummings <mcummings@gentoo.org>
generic-genome-browser-1.58.ebuild:
Virtuals for some perl-core deps
28 Nov 2005; <mcumming@gentoo.org> generic-genome-browser-1.58.ebuild:
Switched from perl-module to perl-app eclass
19 Sep 2005; Olivier Fisette <ribosome@gentoo.org> metadata.xml:
Maintainer changed from Stephen Diener (MIA) to Olivier Fisette.
24 May 2005; Michael Cummings <mcummings@gentoo.org>
generic-genome-browser-1.58.ebuild:
dev-perl/Digest-MD5 => perl-core/Digest-MD5
24 May 2005; Michael Cummings <mcummings@gentoo.org>
generic-genome-browser-1.58.ebuild:
dev-perl/CGI => perl-core/CGI
*generic-genome-browser-1.58 (23 Dec 2004)
23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
+generic-genome-browser-1.58.ebuild:
Moved from app-sci/generic-genome-browser to
sci-biology/generic-genome-browser.
03 Aug 2004; David Holm <dholm@gentoo.org>
generic-genome-browser-1.58.ebuild:
Added to ~ppc.
*generic-genome-browser-1.58 (13 Jan 2004)
13 Jan 2004; Stephen Diener <sediener@gentoo.org>
generic-genome-browser-1.58.ebuild:
Initial import
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