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# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
PYTHON_COMPAT=( python2_7 )
inherit distutils-r1
DESCRIPTION="Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data"
HOMEPAGE="http://pythonhosted.org/metaseq/"
SRC_URI="https://github.com/daler/metaseq/archive/v${PV}.tar.gz -> ${P}.tar.gz"
LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""
RDEPEND="
dev-python/matplotlib[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/pandas[${PYTHON_USEDEP}]
dev-python/pyyaml[${PYTHON_USEDEP}]
sci-biology/bx-python[${PYTHON_USEDEP}]
sci-biology/gffutils[${PYTHON_USEDEP}]
sci-biology/pysam[${PYTHON_USEDEP}]
sci-biology/pybedtools[${PYTHON_USEDEP}]
sci-biology/samtools:0[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
"
DEPEND="${RDEPEND}"
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