blob: f39de8ead8ad0f1ba0cdfbdd8ab0b7de54fe85e9 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
|
# Copyright 2021-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
PYTHON_COMPAT=( python3_{8..10} )
DISTUTILS_OPTIONAL=1
inherit distutils-r1
DESCRIPTION="splice-aware sequence aligner with SSE2 and SSE4.1"
HOMEPAGE="https://github.com/lh3/minimap2"
SRC_URI="https://github.com/lh3/${PN}/releases/download/v${PV}/${P}.tar.bz2"
LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="python cpu_flags_x86_sse4_1"
REQUIRED_USE="${PYTHON_REQUIRED_USE}"
DEPEND="sys-libs/zlib
python? (
${PYTHON_DEPS}
)"
RDEPEND="${DEPEND}"
BDEPEND="python? ( dev-python/cython[${PYTHON_USEDEP}] )"
src_prepare(){
sed -e 's/-O2 //' -e 's/^CFLAGS=/CFLAGS+=/' -i Makefile || die
if ! use cpu_flags_x86_sse4_1; then
sed -i -e "/extra_compile_args.append('-msse4.1')/d" setup.py || die
fi
if use python; then
distutils-r1_src_prepare
fi
default
}
src_configure() {
if use python; then
distutils-r1_src_configure
fi
default
}
src_compile() {
if use python; then
distutils-r1_src_compile
fi
default
}
src_install() {
if use python; then
distutils-r1_src_install
fi
dobin "${PN}"
insinto /usr/include
doins minimap.h mmpriv.h
insinto /usr/share/"${PN}"/examples
doins example.c
doman minimap2.1
einstalldocs
}
|
GitWeb
