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# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
PYTHON_COMPAT=( python2_7 )
inherit distutils-r1
DESCRIPTION="Close gaps using PacBio RS or 454 FLX+ reads"
HOMEPAGE="https://www.hgsc.bcm.edu/software/jelly"
SRC_URI="http://sourceforge.net/projects/pb-jelly/files/PBSuite_14.9.9.tgz -> pb-jelly-14.9.9.tgz"
LICENSE="BSD-2"
SLOT="0"
KEYWORDS=""
IUSE=""
DEPEND="
sci-biology/blasr
<=dev-python/networkx-1.1[${PYTHON_USEDEP}]" # upstream says "Versions past v1.1 have been shown to have many issues."
RDEPEND="${DEPEND}"
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