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authorJakub Moc <jakub@gentoo.org>2007-06-30 14:07:35 +0000
committerJakub Moc <jakub@gentoo.org>2007-06-30 14:07:35 +0000
commit893e443851f3807aa61effde89ea04e1723d03b7 (patch)
tree1ca6db58a71c16f11b9dbec00ca581e924a23fba
parentCosmetics (diff)
downloadsunrise-893e443851f3807aa61effde89ea04e1723d03b7.tar.gz
sunrise-893e443851f3807aa61effde89ea04e1723d03b7.tar.bz2
sunrise-893e443851f3807aa61effde89ea04e1723d03b7.zip
sci-biology/clover: einfo -> elog; cosmetics
svn path=/sunrise/; revision=4098
-rw-r--r--sci-biology/clover/ChangeLog3
-rw-r--r--sci-biology/clover/Manifest16
-rw-r--r--sci-biology/clover/clover-2006.07.17.ebuild22
3 files changed, 16 insertions, 25 deletions
diff --git a/sci-biology/clover/ChangeLog b/sci-biology/clover/ChangeLog
index 45e17d614..f99df3cc5 100644
--- a/sci-biology/clover/ChangeLog
+++ b/sci-biology/clover/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 30 Jun 2007; Jakub Moc <jakub@gentoo.org> clover-2006.07.17.ebuild:
+ einfo -> elog; cosmetics
+
15 Mar 2007; AK <gentoo@horizon.ath.cx> +clover-2006.07.17.ebuild,
+metadata.xml:
new package (bug 142269)
diff --git a/sci-biology/clover/Manifest b/sci-biology/clover/Manifest
index 355782c14..38fae3785 100644
--- a/sci-biology/clover/Manifest
+++ b/sci-biology/clover/Manifest
@@ -1,17 +1,5 @@
DIST clover-2006-07-17.tar.gz 15610 RMD160 e7f5c2b53afef2df292f9274b2a1ce2c1fbbc0c3 SHA1 f80b528ceb9833d0465b1196ae793c5364a87109 SHA256 e7b5b9fa8a341d49d9cf79a6d03ef0677a493f0c34a9a2f466a864575af91cb9
DIST jaspar2005core 14913 RMD160 6fe43472cc1a2e0389ad9290801db56488773d3e SHA1 be8cdff62cf35f430c0c17f53564529b08000c9c SHA256 498a560c67411789106b50ccdfd9bc41f571d77c2fe9bfba7e95128c0a122fe4
-EBUILD clover-2006.07.17.ebuild 1059 RMD160 968519d9c6c17d29102ae9b6465acfe3812bcae7 SHA1 873e0f380eac7567ef3c2f9ee29fbc619a31fc4f SHA256 0ed8a75004280210ccd56dfb5c510bca400ece76cddbe3728ea3674f52387bd6
-MD5 1509c4396358a7c57ced969757f1eb1e clover-2006.07.17.ebuild 1059
-RMD160 968519d9c6c17d29102ae9b6465acfe3812bcae7 clover-2006.07.17.ebuild 1059
-SHA256 0ed8a75004280210ccd56dfb5c510bca400ece76cddbe3728ea3674f52387bd6 clover-2006.07.17.ebuild 1059
-MISC ChangeLog 233 RMD160 57d369f4ef428cbe77d625e89c21167ef0519166 SHA1 d7a9958d9523c9c5134e2f4b3196a114c4e0c599 SHA256 9e2831ba3cdc43db68aafa656f9b533aa4a5d3c81d8bd71438135ade7a799293
-MD5 7ffea1525a9a4b528e3b2debc5c5f8d3 ChangeLog 233
-RMD160 57d369f4ef428cbe77d625e89c21167ef0519166 ChangeLog 233
-SHA256 9e2831ba3cdc43db68aafa656f9b533aa4a5d3c81d8bd71438135ade7a799293 ChangeLog 233
+EBUILD clover-2006.07.17.ebuild 1046 RMD160 abf81b8f5d55372c1416ad24a89c214fec6c7b21 SHA1 a11311a3231b6a6ae83bccb31fab159d8cfece85 SHA256 49a511751b5492384985df3a40ee28bbd316799fa01345ead6f29ee87a86560e
+MISC ChangeLog 331 RMD160 c2d65a58bb342c00f31063c9c687aae09ede1e02 SHA1 9535d6a1cfafbb4b431647f507977a6f6fa3a4d2 SHA256 8016ea7b5bbba73c074d43ee62826f750539fd40f1fb7dc874c44175c1500e97
MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42
-MD5 1e678929a9fec6632e227bdf2262e9a1 metadata.xml 170
-RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 metadata.xml 170
-SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42 metadata.xml 170
-MD5 2fd761a79ad477d120b354d1a5a9baab files/digest-clover-2006.07.17 470
-RMD160 19c7bb7d36860924f2b707673290c6dd8e2d7a3a files/digest-clover-2006.07.17 470
-SHA256 d95bafedeabe12831000becf898ee985b95ff83e269e3d5ee39506fe1287a0d4 files/digest-clover-2006.07.17 470
diff --git a/sci-biology/clover/clover-2006.07.17.ebuild b/sci-biology/clover/clover-2006.07.17.ebuild
index 4cf143b0f..d86b96e85 100644
--- a/sci-biology/clover/clover-2006.07.17.ebuild
+++ b/sci-biology/clover/clover-2006.07.17.ebuild
@@ -5,10 +5,11 @@
inherit versionator toolchain-funcs
MY_PV=$(replace_all_version_separators '-')
-
+MY_P="${PN}-${MY_PV}"
DESCRIPTION="Cis-eLement OVERrepresentation: Detection of functional DNA motifs"
HOMEPAGE="http://zlab.bu.edu/clover/"
-SRC_URI="http://zlab.bu.edu/~mfrith/downloads/${PN}-${MY_PV}.tar.gz http://zlab.bu.edu/clover/jaspar2005core"
+SRC_URI="http://zlab.bu.edu/~mfrith/downloads/${MY_P}.tar.gz
+ http://zlab.bu.edu/clover/jaspar2005core"
LICENSE="as-is"
SLOT="0"
@@ -18,26 +19,25 @@ KEYWORDS="~x86"
DEPEND=""
RDEPEND=""
-S="${WORKDIR}/${PN}-${MY_PV}"
+S="${WORKDIR}/${MY_P}"
src_unpack() {
- unpack ${PN}-${MY_PV}.tar.gz
+ unpack ${MY_P}.tar.gz
+ sed -i "s:g++:$(tc-getCXX):; s:-Wall -O3:${CFLAGS}:" Makefile || die "sed failed"
}
src_compile() {
- sed -i "s:g++:$(tc-getCXX):; s:-Wall -O3:${CFLAGS}:" Makefile || die "sed failed"
emake || die "emake failed"
}
src_install() {
dobin clover
- dodir "/usr/share/${PN}"
- insinto "/usr/share/${PN}"
- doins ${DISTDIR}/jaspar2005core || die
+ insinto /usr/share/${PN}
+ doins "${DISTDIR}"/jaspar2005core || die "doins failed"
}
pkg_postinst() {
- einfo "The motif library jaspar2005core has been installed in"
- einfo " /usr/share/clover/jaspar2005core"
- einfo "You can pass this library to clover for motif search, or use your own library."
+ elog "The motif library jaspar2005core has been installed in"
+ elog " /usr/share/clover/jaspar2005core"
+ elog "You can pass this library to clover for motif search, or use your own library."
}