summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorThomas Sachau <tommy@gentoo.org>2008-09-08 19:44:28 +0000
committerThomas Sachau <tommy@gentoo.org>2008-09-08 19:44:28 +0000
commitaca56b750d67c50929b016bf237639d5faf5bcb0 (patch)
treee171674af8e852425cee8e6f6183a3e43fdc1fa7 /sci-biology
parentscripts/use_desc_gen: Better this way (diff)
downloadsunrise-aca56b750d67c50929b016bf237639d5faf5bcb0.tar.gz
sunrise-aca56b750d67c50929b016bf237639d5faf5bcb0.tar.bz2
sunrise-aca56b750d67c50929b016bf237639d5faf5bcb0.zip
sci-biology/glimmer: In gentoo-x86
svn path=/sunrise/; revision=7030
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/glimmer/ChangeLog17
-rw-r--r--sci-biology/glimmer/Manifest4
-rw-r--r--sci-biology/glimmer/glimmer-3.02.ebuild38
-rw-r--r--sci-biology/glimmer/metadata.xml5
4 files changed, 0 insertions, 64 deletions
diff --git a/sci-biology/glimmer/ChangeLog b/sci-biology/glimmer/ChangeLog
deleted file mode 100644
index 59082e294..000000000
--- a/sci-biology/glimmer/ChangeLog
+++ /dev/null
@@ -1,17 +0,0 @@
-# ChangeLog for sci-biology/glimmer
-# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 14 Mar 2007; AK <gentoo@horizon.ath.cx> glimmer-3.02.ebuild:
- cleanup and update license (it's actually artistic in disguise)
-
- 14 Mar 2007; AK <gentoo@horizon.ath.cx> glimmer-3.02.ebuild:
- simplify src_install a bit
-
- 14 Mar 2007; AK <gentoo@horizon.ath.cx> glimmer-3.02.ebuild:
- aiieeee, syntax terror!
-
- 14 Mar 2007; AK <gentoo@horizon.ath.cx> +glimmer-3.02.ebuild,
- +metadata.xml:
- new package sci-biology/glimmer (bug 170895)
-
diff --git a/sci-biology/glimmer/Manifest b/sci-biology/glimmer/Manifest
deleted file mode 100644
index 6b9a7bb15..000000000
--- a/sci-biology/glimmer/Manifest
+++ /dev/null
@@ -1,4 +0,0 @@
-DIST glimmer302.tar.gz 5637075 RMD160 bc29bb045f7a4179504cb3843741393f42e11ab8 SHA1 e2f27fdab82cd8978f1452bfcd4c0287c52b77b7 SHA256 a1e422ee56f495f9f99e1741ba2043f026fc8182afcc47cb20cfd2d989537221
-EBUILD glimmer-3.02.ebuild 821 RMD160 dac6d3a43236cd0278c286ef6bc541ff8afbf24e SHA1 9f0bf71d65cf387f50032cfc81b83e7d5b29a375 SHA256 3850696c967df0e7450bfcd1deaa3614c81df52fbb7098cb3570e52451c08648
-MISC ChangeLog 562 RMD160 dc4278bcb8ac6cbeeba8f5f7c63f102fd0fbd288 SHA1 09e975538d7629d9997dd174338a48e40fbf640c SHA256 ab852e9584c3c743da63b93711d2e7318081e0cac52120b0146a95bb0b5e41c9
-MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42
diff --git a/sci-biology/glimmer/glimmer-3.02.ebuild b/sci-biology/glimmer/glimmer-3.02.ebuild
deleted file mode 100644
index 9274570a0..000000000
--- a/sci-biology/glimmer/glimmer-3.02.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2008 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-inherit versionator
-
-MY_PV=$(delete_all_version_separators)
-MY_P="${PN}${MY_PV}"
-DESCRIPTION="An HMM-based microbial gene finding system from TIGR"
-HOMEPAGE="http://www.cbcb.umd.edu/software/glimmer/"
-SRC_URI="http://www.cbcb.umd.edu/software/${PN}/${MY_P}.tar.gz"
-
-LICENSE="Artistic"
-SLOT="0"
-IUSE=""
-KEYWORDS="~x86"
-
-DEPEND=""
-RDEPEND=""
-
-S=${WORKDIR}/${MY_P}
-
-src_compile() {
- sed -i -e 's|\(set awkpath =\).*|\1 /usr/share/'${PN}'/scripts|' \
- -e 's|\(set glimmerpath =\).*|\1 /usr/bin|' scripts/* || die "failed to rewrite paths"
- cd src
- emake || die "emake failed"
-}
-
-src_install() {
- rm -f bin/test
- dobin bin/*
-
- insinto /usr/share/${PN}/scripts
- doins scripts/*
-
- dodoc glim302notes.pdf
-}
diff --git a/sci-biology/glimmer/metadata.xml b/sci-biology/glimmer/metadata.xml
deleted file mode 100644
index 7e3286984..000000000
--- a/sci-biology/glimmer/metadata.xml
+++ /dev/null
@@ -1,5 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>maintainer-wanted</herd>
-</pkgmetadata>