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authorDavid Seifert <soap@gentoo.org>2016-09-25 00:48:54 +0200
committerDavid Seifert <soap@gentoo.org>2016-09-25 00:55:41 +0200
commit8f2c0bf2f444a049e647bc49788ff9ae9f57b9e9 (patch)
tree13c51fe3285f69a71f1f9e5448a9c0c0e3183dad /sci-biology/bedtools
parentsci-biology/bedtools: Version bump to 2.26.0 (diff)
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sci-biology/bedtools: Remove old ebuilds
Package-Manager: portage-2.3.1
Diffstat (limited to 'sci-biology/bedtools')
-rw-r--r--sci-biology/bedtools/Manifest2
-rw-r--r--sci-biology/bedtools/bedtools-2.16.2.ebuild33
-rw-r--r--sci-biology/bedtools/bedtools-2.20.1.ebuild33
3 files changed, 0 insertions, 68 deletions
diff --git a/sci-biology/bedtools/Manifest b/sci-biology/bedtools/Manifest
index c5daa598439..e398b3bee6f 100644
--- a/sci-biology/bedtools/Manifest
+++ b/sci-biology/bedtools/Manifest
@@ -1,3 +1 @@
-DIST BEDTools.v2.16.2.tar.gz 978293 SHA256 f5f5c864eb3f465ac7fd5fa651e2e4dbc0cd8d9198367148c52f3be3f46c2772 SHA512 4dfeb048a7eacb1ca70caed64087d279aa955f30cf685f938e5a02ba328d1a878a75bfe37b537fc06cf9023474e4922719f1b391943ff0143c7760e987fa4645 WHIRLPOOL d6b89fdd4dc1f7bebcda71ea7b4c76c5d5811d7b23861019e19667171572743bd8dfbd74d4e80838aa4bfa06a524bcfaf5e76cd52c49b0658929b0060ee3aaa0
-DIST bedtools-2.20.1.tar.gz 4213348 SHA256 b5401810f8b12b683575f0119521dda64ff2f0a59faa308357405c4ae4e328d3 SHA512 b5c27601365a2126c58492791a52a262c874073cc1626bb1e38545ccf6e3594d12d2d2116304374b3446a588611cfd410c8ff166170823071b33c444c9fd36a7 WHIRLPOOL b768a7e064444d5d0434aea5251e132d68fbeb580783034c8e327666eaace0307febc80e9d6d3eea2f0f648263ce0ac836fac7a676586a6e6a8ec4daf39e6a84
DIST bedtools-2.26.0.tar.gz 19939711 SHA256 65f32f32cbf1b91ba42854b40c604aa6a16c7d3b3ec110d6acf438eb22df0a4a SHA512 b224adcc09322e90ef389e8172e14572b68f164185fe1a8814db1c47bb4f15656ca8c0ff0061017eb54d76affbe0d0f5793d893b8ab489b56eaf0818616a5def WHIRLPOOL 8d6e3b58dc38d7ab91482ffe5ee773953864ca79bdbf005b17fec51952a869b39bf775d836ed34496a7784565bb84380eef284e285e842d52229fe2fc6a214b2
diff --git a/sci-biology/bedtools/bedtools-2.16.2.ebuild b/sci-biology/bedtools/bedtools-2.16.2.ebuild
deleted file mode 100644
index 3920b486108..00000000000
--- a/sci-biology/bedtools/bedtools-2.16.2.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-inherit flag-o-matic
-
-DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, and SAM/BAM file formats"
-HOMEPAGE="https://github.com/arq5x/bedtools2"
-SRC_URI="https://bedtools.googlecode.com/files/BEDTools.v${PV}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~x86 ~amd64"
-IUSE=""
-
-S="${WORKDIR}/BEDTools-Version-${PV}"
-
-src_prepare() {
- filter-ldflags -Wl,--as-needed
- sed -i \
- -e '/export CXXFLAGS/ d' \
- -e '/export CXX/ d' \
- Makefile || die
-}
-
-src_install() {
- dobin bin/*
- dodoc README* RELEASE_HISTORY
- insinto /usr/share/${PN}
- doins -r genomes
-}
diff --git a/sci-biology/bedtools/bedtools-2.20.1.ebuild b/sci-biology/bedtools/bedtools-2.20.1.ebuild
deleted file mode 100644
index 2e1acbcc9cf..00000000000
--- a/sci-biology/bedtools/bedtools-2.20.1.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-inherit flag-o-matic
-
-DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, and SAM/BAM file formats"
-HOMEPAGE="https://github.com/arq5x/bedtools2"
-SRC_URI="https://github.com/arq5x/bedtools2/releases/download/v${PV}/bedtools-${PV}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~x86 ~amd64"
-IUSE=""
-
-S="${WORKDIR}/bedtools2-${PV}"
-
-src_prepare() {
- filter-ldflags -Wl,--as-needed
- sed -i \
- -e '/export CXXFLAGS/ d' \
- -e '/export CXX/ d' \
- Makefile || die
-}
-
-src_install() {
- dobin bin/*
- dodoc README* RELEASE_HISTORY
- insinto /usr/share/${PN}
- doins -r genomes
-}