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authorDavid Seifert <soap@gentoo.org>2017-12-25 11:02:15 +0100
committerDavid Seifert <soap@gentoo.org>2017-12-25 17:09:07 +0100
commitf1a2182baa171c729f5c2134144664780e041f37 (patch)
tree6b8f84c7919a393a15ba69e0093e5aa388b090aa /sci-biology/t-coffee/t-coffee-9.03.1318-r1.ebuild
parentsci-biology/primer3: Remove old (diff)
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sci-biology/t-coffee: Remove old
Package-Manager: Portage-2.3.19, Repoman-2.3.6
Diffstat (limited to 'sci-biology/t-coffee/t-coffee-9.03.1318-r1.ebuild')
-rw-r--r--sci-biology/t-coffee/t-coffee-9.03.1318-r1.ebuild56
1 files changed, 0 insertions, 56 deletions
diff --git a/sci-biology/t-coffee/t-coffee-9.03.1318-r1.ebuild b/sci-biology/t-coffee/t-coffee-9.03.1318-r1.ebuild
deleted file mode 100644
index 9f32c135fb7..00000000000
--- a/sci-biology/t-coffee/t-coffee-9.03.1318-r1.ebuild
+++ /dev/null
@@ -1,56 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils flag-o-matic fortran-2 toolchain-funcs versionator
-
-MY_PV="$(replace_version_separator 2 .r)"
-MY_P="T-COFFEE_distribution_Version_${MY_PV}"
-
-DESCRIPTION="A multiple sequence alignment package"
-HOMEPAGE="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html"
-SRC_URI="http://www.tcoffee.org/Packages/Stable/Version_${MY_PV}/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="amd64 ppc ~ppc64 x86 ~amd64-linux ~x86-linux"
-IUSE="examples"
-
-RDEPEND="
- sci-biology/clustalw
- sci-chemistry/tm-align"
-DEPEND=""
-
-S="${WORKDIR}/${MY_P}"
-
-die_compile() {
- echo
- eerror "If you experience an internal compiler error (consult the above"
- eerror "messages), try compiling t-coffee using very modest compiler flags."
- eerror "See bug #114745 on the Gentoo Bugzilla for more details."
- die "Compilation failed"
-}
-
-src_prepare() {
- epatch "${FILESDIR}"/${P}-flags.patch
-}
-
-src_compile() {
- [[ $(gcc-version) == "3.4" ]] || \
- [[ $(gcc-version) == "4.1" ]] && \
- append-flags -fno-unit-at-a-time
- emake \
- CC="$(tc-getCC)" \
- CFLAGS="${CFLAGS}" \
- -C t_coffee_source t_coffee
-}
-
-src_install() {
- dobin t_coffee_source/t_coffee
-
- if use examples; then
- insinto /usr/share/${PN}
- doins -r example
- fi
-}