summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorDavid Seifert <soap@gentoo.org>2018-02-11 13:20:51 +0100
committerDavid Seifert <soap@gentoo.org>2018-02-11 13:20:51 +0100
commita1b3056e6cae31c803fd4cd3a77adbd5a9cd4937 (patch)
treeee6ae8b614a3cf4d049ac7529ebe4e5bb8fa7c1b /sci-biology
parentsci-biology/seqan: Version bump to 2.4.0 (diff)
downloadgentoo-a1b3056e6cae31c803fd4cd3a77adbd5a9cd4937.tar.gz
gentoo-a1b3056e6cae31c803fd4cd3a77adbd5a9cd4937.tar.bz2
gentoo-a1b3056e6cae31c803fd4cd3a77adbd5a9cd4937.zip
sci-biology/seqan: Add live ebuild
Package-Manager: Portage-2.3.24, Repoman-2.3.6
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/seqan/seqan-9999.ebuild90
1 files changed, 90 insertions, 0 deletions
diff --git a/sci-biology/seqan/seqan-9999.ebuild b/sci-biology/seqan/seqan-9999.ebuild
new file mode 100644
index 00000000000..0005819ff4d
--- /dev/null
+++ b/sci-biology/seqan/seqan-9999.ebuild
@@ -0,0 +1,90 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+: ${CMAKE_MAKEFILE_GENERATOR:=ninja}
+PYTHON_COMPAT=( python2_7 )
+
+inherit cmake-utils multibuild python-any-r1 toolchain-funcs
+
+DESCRIPTION="C++ Sequence Analysis Library"
+HOMEPAGE="http://www.seqan.de/"
+
+if [[ ${PV} == *9999 ]]; then
+ inherit git-r3
+ EGIT_REPO_URI="https://github.com/seqan/seqan.git"
+ EGIT_BRANCH="develop"
+else
+ SRC_URI="https://github.com/seqan/seqan/archive/seqan-v${PV}.tar.gz"
+ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+
+ S=${WORKDIR}/seqan-seqan-v${PV}
+fi
+
+LICENSE="BSD GPL-3"
+SLOT="0"
+IUSE="cpu_flags_x86_sse4_1 doc tools"
+REQUIRED_USE="cpu_flags_x86_sse4_1"
+
+RDEPEND="
+ app-arch/bzip2:=
+ sys-libs/zlib:=
+ !!sci-biology/seqan:2.0
+ !!sci-biology/seqan:2.1
+ !!sci-biology/seqan:2.2"
+DEPEND="
+ ${RDEPEND}
+ doc? (
+ $(python_gen_any_dep 'dev-python/sphinx[${PYTHON_USEDEP}]')
+ ${PYTHON_DEPS}
+ )"
+
+python_check_deps() {
+ use doc && has_version "dev-python/sphinx[${PYTHON_USEDEP}]"
+}
+
+pkg_setup() {
+ if [[ ${MERGE_TYPE} != binary ]]; then
+ use doc && python-any-r1_pkg_setup
+ use tools && tc-check-openmp
+
+ MULTIBUILD_VARIANTS=(
+ $(usev tools)
+ library
+ )
+ fi
+}
+
+src_configure() {
+ my_configure() {
+ local mycmakeargs=( -DCMAKE_INSTALL_DOCDIR="share/doc/${PF}" )
+ case "${MULTIBUILD_ID}" in
+ tools)
+ mycmakeargs+=(
+ -DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_APPS
+ -DSEQAN_NO_DOX=ON
+ )
+ ;;
+ library)
+ mycmakeargs+=(
+ -DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_LIBRARY
+ -DSEQAN_NO_DOX=$(usex !doc)
+ )
+ ;;
+ *)
+ die "${MULTIBUILD_ID} is not recognized"
+ ;;
+ esac
+ cmake-utils_src_configure
+ }
+ multibuild_foreach_variant my_configure
+}
+
+src_compile() {
+ multibuild_foreach_variant cmake-utils_src_compile
+}
+
+src_install() {
+ multibuild_foreach_variant cmake-utils_src_install
+}