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-rw-r--r--profiles/package.mask1
-rw-r--r--sys-cluster/slurm/files/slurm-20.11.0.1_autoconf-lua.patch50
-rw-r--r--sys-cluster/slurm/slurm-20.11.0.1-r100.ebuild269
3 files changed, 320 insertions, 0 deletions
diff --git a/profiles/package.mask b/profiles/package.mask
index c08107392a3..c8907265af7 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -530,6 +530,7 @@ kde-apps/kdebase-meta:5
=sci-visualization/gnuplot-5.4.1-r1
>=sci-visualization/fityk-1.3.1-r100
>=sys-apps/likwid-4.3.4
+>=sys-cluster/slurm-20.11.0.1-r100
>=www-apache/mod_security-2.9.3-r100
>=www-client/elinks-0.13.5-r100
>=www-client/luakit-2.2.1-r100
diff --git a/sys-cluster/slurm/files/slurm-20.11.0.1_autoconf-lua.patch b/sys-cluster/slurm/files/slurm-20.11.0.1_autoconf-lua.patch
new file mode 100644
index 00000000000..f17039e0b59
--- /dev/null
+++ b/sys-cluster/slurm/files/slurm-20.11.0.1_autoconf-lua.patch
@@ -0,0 +1,50 @@
+Prevent automagical detection of Lua, abort if Lua support has been
+requested but Lua cannot be found with pkg-config, and use the Lua
+pkg-config module set up by the eclass-provided wrapper (or unslotted Lua)
+instead of enumerating installed versions.
+
+--- a/auxdir/x_ac_lua.m4
++++ b/auxdir/x_ac_lua.m4
+@@ -12,18 +12,21 @@
+
+ AC_DEFUN([X_AC_LUA],
+ [
+- x_ac_lua_pkg_name="lua"
+- #check for 5.3 then 5.2 then 5.1
+- PKG_CHECK_EXISTS([lua5.3], [x_ac_lua_pkg_name=lua5.3],
+- [PKG_CHECK_EXISTS([lua-5.3], [x_ac_lua_pkg_name=lua-5.3],
+- [PKG_CHECK_EXISTS([lua5.2], [x_ac_lua_pkg_name=lua5.2],
+- [PKG_CHECK_EXISTS([lua-5.2], [x_ac_lua_pkg_name=lua-5.2],
+- [PKG_CHECK_EXISTS([lua5.1], [x_ac_lua_pkg_name=lua5.1],
+- [PKG_CHECK_EXISTS([lua-5.1], [x_ac_lua_pkg_name=lua-5.1],
+- [x_ac_lua_pkg_name="lua >= 5.1"])])])])])])
+- PKG_CHECK_MODULES([lua], ${x_ac_lua_pkg_name},
+- [x_ac_have_lua="yes"],
+- [x_ac_have_lua="no"])
++ AC_MSG_CHECKING([whether to enable support for job scripts written in Lua])
++ AC_ARG_ENABLE(
++ [lua],
++ AS_HELP_STRING(--enable-lua, enable support for job scripts written in Lua),
++ [x_ac_enable_lua="$enableval"],
++ [x_ac_enable_lua=yes])
++ AC_MSG_RESULT([$x_ac_enable_lua])
++
++ x_ac_have_lua=no
++ if test "x$x_ac_enable_lua" = "xyes"; then
++ x_ac_lua_pkg_name="lua"
++ PKG_CHECK_MODULES([lua], ${x_ac_lua_pkg_name},
++ [x_ac_have_lua="yes"],
++ [AC_MSG_ERROR([Lua support requested but Lua not found])])
++ fi
+
+ if test "x$x_ac_have_lua" = "xyes"; then
+ saved_CFLAGS="$CFLAGS"
+@@ -52,8 +55,6 @@
+ fi
+ CFLAGS="$saved_CFLAGS"
+ LIBS="$saved_LIBS"
+- else
+- AC_MSG_WARN([unable to locate lua package])
+ fi
+
+ AM_CONDITIONAL(HAVE_LUA, test "x$x_ac_have_lua" = "xyes")
diff --git a/sys-cluster/slurm/slurm-20.11.0.1-r100.ebuild b/sys-cluster/slurm/slurm-20.11.0.1-r100.ebuild
new file mode 100644
index 00000000000..ab498c39729
--- /dev/null
+++ b/sys-cluster/slurm/slurm-20.11.0.1-r100.ebuild
@@ -0,0 +1,269 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+LUA_COMPAT=( lua5-{1..3} )
+
+if [[ ${PV} == *9999* ]]; then
+ EGIT_REPO_URI="https://github.com/SchedMD/slurm.git"
+ INHERIT_GIT="git-r3"
+ MY_P="${P}"
+else
+ if [[ ${PV} == *pre* || ${PV} == *rc* ]]; then
+ MY_PV=$(ver_rs '-0.') # pre-releases or release-candidate
+ else
+ MY_PV=$(ver_rs 1-4 '-') # stable releases
+ fi
+ MY_P="${PN}-${MY_PV}"
+ INHERIT_GIT=""
+ SRC_URI="https://github.com/SchedMD/slurm/archive/${MY_P}.tar.gz"
+ KEYWORDS="~amd64 ~x86"
+fi
+
+inherit autotools bash-completion-r1 lua-single pam perl-module prefix toolchain-funcs systemd ${INHERIT_GIT}
+
+DESCRIPTION="A Highly Scalable Resource Manager"
+HOMEPAGE="https://www.schedmd.com https://github.com/SchedMD/slurm"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE="debug hdf5 html ipmi json lua multiple-slurmd +munge mysql netloc numa ofed pam perl slurmdbd static-libs ucx torque X"
+
+COMMON_DEPEND="
+ !sys-cluster/torque
+ !net-analyzer/slurm
+ !net-analyzer/sinfo
+ || ( sys-cluster/pmix[-pmi] >=sys-cluster/openmpi-2.0.0 )
+ mysql? (
+ || ( dev-db/mariadb-connector-c dev-db/mysql-connector-c )
+ slurmdbd? ( || ( dev-db/mariadb:* dev-db/mysql:* ) )
+ )
+ munge? ( sys-auth/munge )
+ pam? ( sys-libs/pam )
+ lua? ( ${LUA_DEPS} )
+ ipmi? ( sys-libs/freeipmi )
+ json? ( dev-libs/json-c:= )
+ amd64? ( netloc? ( || ( sys-apps/netloc >=sys-apps/hwloc-2.1.0[netloc] ) ) )
+ hdf5? ( sci-libs/hdf5:= )
+ numa? ( sys-process/numactl )
+ ofed? ( sys-fabric/ofed )
+ ucx? ( sys-cluster/ucx )
+ X? ( net-libs/libssh2 )
+ >=sys-apps/hwloc-1.1.1-r1
+ sys-libs/ncurses:0=
+ app-arch/lz4:0=
+ dev-libs/glib:2=
+ sys-libs/readline:0="
+
+DEPEND="${COMMON_DEPEND}
+ html? ( sys-apps/man2html )"
+
+RDEPEND="${COMMON_DEPEND}
+ acct-user/slurm
+ acct-group/slurm
+ dev-libs/libcgroup"
+
+REQUIRED_USE="lua? ( ${LUA_REQUIRED_USE} )
+ torque? ( perl )"
+
+S="${WORKDIR}/${PN}-${MY_P}"
+
+LIBSLURM_PERL_S="${S}/contribs/perlapi/libslurm/perl"
+LIBSLURMDB_PERL_S="${S}/contribs/perlapi/libslurmdb/perl"
+
+RESTRICT="test"
+
+PATCHES=(
+ "${FILESDIR}"/${PN}-20.11.0.1_autoconf-lua.patch
+)
+
+src_unpack() {
+ if [[ ${PV} == *9999* ]]; then
+ git-r3_src_unpack
+ else
+ default
+ fi
+}
+
+src_prepare() {
+ tc-ld-disable-gold
+ default
+
+ # pids should go to /var/run/slurm
+ sed \
+ -e 's:/tmp:/var/tmp:g' \
+ -e "s:/var/run/slurmctld.pid:${EPREFIX}/run/slurm/slurmctld.pid:g" \
+ -e "s:/var/run/slurmd.pid:${EPREFIX}/run/slurm/slurmd.pid:g" \
+ -e "s:StateSaveLocation=.*:StateSaveLocation=${EPREFIX}/var/spool/slurm:g" \
+ -e "s:SlurmdSpoolDir=.*:SlurmdSpoolDir=${EPREFIX}/var/spool/slurm/slurmd:g" \
+ -i "${S}/etc/slurm.conf.example" \
+ || die "Can't sed for /var/run/slurmctld.pid"
+ sed \
+ -e "s:/var/run/slurmdbd.pid:${EPREFIX}/run/slurm/slurmdbd.pid:g" \
+ -i "${S}/etc/slurmdbd.conf.example" \
+ || die "Can't sed for /var/run/slurmdbd.pid"
+ # gentooify systemd services
+ sed \
+ -e 's:sysconfig/.*:conf.d/slurm:g' \
+ -e 's:var/run/:run/slurm/:g' \
+ -e '/^EnvironmentFile=.*/d' \
+ -i "${S}/etc"/*.service.in \
+ || die "Can't sed systemd services for sysconfig or var/run/"
+
+ sed -e '/AM_PATH_GTK_2_0/d' -i configure.ac || die
+
+ hprefixify auxdir/{ax_check_zlib,x_ac_{lz4,ofed,munge}}.m4
+ eautoreconf
+}
+
+src_configure() {
+ local myconf=(
+ --sysconfdir="${EPREFIX}/etc/${PN}"
+ --with-hwloc="${EPREFIX}/usr"
+ --htmldir="${EPREFIX}/usr/share/doc/${PF}"
+ )
+ use pam && myconf+=( --with-pam_dir=$(getpam_mod_dir) )
+ use mysql || myconf+=( --without-mysql_config )
+ use amd64 && myconf+=( $(use_with netloc) )
+ econf "${myconf[@]}" \
+ $(use_enable debug) \
+ $(use_enable lua) \
+ $(use_enable pam) \
+ $(use_enable X x11) \
+ $(use_with munge) \
+ $(use_with json) \
+ $(use_with hdf5) \
+ $(use_with ofed) \
+ $(use_with ucx) \
+ $(use_enable static-libs static) \
+ $(use_enable multiple-slurmd)
+
+ # --htmldir does not seems to propagate... Documentations are installed
+ # in /usr/share/doc/slurm-2.3.0/html
+ # instead of /usr/share/doc/slurm-2.3.0.2/html
+ sed \
+ -e "s|htmldir = .*/html|htmldir = \${prefix}/share/doc/slurm-${PVR}/html|g" \
+ -i doc/html/Makefile || die
+ if use perl ; then
+ # small hack to make it compile
+ mkdir -p "${S}/src/api/.libs" || die
+ mkdir -p "${S}/src/db_api/.libs" || die
+ touch "${S}/src/api/.libs/libslurm.so" || die
+ touch "${S}/src/db_api/.libs/libslurmdb.so" || die
+ cd "${LIBSLURM_PERL_S}" || die
+ S="${LIBSLURM_PERL_S}" SRC_PREP="no" perl-module_src_configure
+ cd "${LIBSLURMDB_PERL_S}" || die
+ S="${LIBSLURMDB_PERL_S}" SRC_PREP="no" perl-module_src_configure
+ cd "${S}" || die
+ rm -rf "${S}/src/api/.libs" "${S}/src/db_api/.libs" || die
+ fi
+}
+
+src_compile() {
+ default
+ use pam && emake -C contribs/pam
+ if use perl ; then
+ cd "${LIBSLURM_PERL_S}" || die
+ S="${LIBSLURM_PERL_S}" perl-module_src_compile
+ cd "${LIBSLURMDB_PERL_S}" || die
+ S="${LIBSLURMDB_PERL_S}" perl-module_src_compile
+ cd "${S}" || die
+ fi
+ use torque && emake -C contribs/torque
+}
+
+src_install() {
+ default
+ use pam && emake DESTDIR="${D}" -C contribs/pam install
+ if use perl; then
+ cd "${LIBSLURM_PERL_S}" || die
+ S="${LIBSLURM_PERL_S}" perl-module_src_install
+ cd "${LIBSLURMDB_PERL_S}" || die
+ S="${LIBSLURMDB_PERL_S}" perl-module_src_install
+ cd "${S}" || die
+ fi
+ if use torque; then
+ emake DESTDIR="${D}" -C contribs/torque
+ rm -f "${D}"/usr/bin/mpiexec || die
+ fi
+ use static-libs || find "${ED}" -name '*.la' -exec rm {} +
+ # install sample configs
+ keepdir /etc/slurm
+ insinto /etc/slurm
+ doins \
+ etc/prolog.example \
+ etc/cgroup.conf.example \
+ etc/slurm.conf.example \
+ etc/slurmdbd.conf.example
+ exeinto /etc/slurm
+ keepdir /etc/slurm/layouts.d
+ # install init.d files
+ newinitd "$(prefixify_ro "${FILESDIR}/slurmd.initd")" slurmd
+ newinitd "$(prefixify_ro "${FILESDIR}/slurmctld.initd")" slurmctld
+ newinitd "$(prefixify_ro "${FILESDIR}/slurmdbd.initd")" slurmdbd
+ # install conf.d files
+ newconfd "${FILESDIR}/slurm.confd" slurm
+ # install logrotate file
+ insinto /etc/logrotate.d
+ newins "${FILESDIR}/logrotate" slurm
+ # install bashcomp
+ newbashcomp contribs/slurm_completion_help/slurm_completion.sh scontrol
+ bashcomp_alias scontrol \
+ sreport sacctmgr squeue scancel sshare sbcast sinfo \
+ sprio sacct salloc sbatch srun sattach sdiag sstat
+ # install systemd files
+ systemd_newtmpfilesd "${FILESDIR}/slurm.tmpfiles" slurm.conf
+ systemd_dounit etc/slurmd.service etc/slurmctld.service etc/slurmdbd.service
+}
+
+pkg_preinst() {
+ if use munge; then
+ sed -i 's,\(SLURM_USE_MUNGE=\).*,\11,' "${D}"/etc/conf.d/slurm || die
+ fi
+}
+
+create_folders_and_fix_permissions() {
+ einfo "Fixing permissions in ${@}"
+ mkdir -p ${@} || die
+ chown -R ${PN}:${PN} ${@} || die
+}
+
+pkg_postinst() {
+ paths=(
+ "${EROOT}"/var/${PN}/checkpoint
+ "${EROOT}"/var/${PN}
+ "${EROOT}"/var/spool/${PN}/slurmd
+ "${EROOT}"/var/spool/${PN}
+ "${EROOT}"/var/log/${PN}
+ /var/tmp/${PN}/${PN}d
+ /var/tmp/${PN}
+ /run/${PN}
+ )
+ local folder_path
+ for folder_path in ${paths[@]}; do
+ create_folders_and_fix_permissions $folder_path
+ done
+ echo
+
+ elog "Please visit the file '/usr/share/doc/${P}/html/configurator.html"
+ elog "through a (javascript enabled) browser to create a configureation file."
+ elog "Copy that file to /etc/slurm/slurm.conf on all nodes (including the headnode) of your cluster."
+ echo
+ elog "For cgroup support, please see https://www.schedmd.com/slurmdocs/cgroup.conf.html"
+ elog "Your kernel must be compiled with the wanted cgroup feature:"
+ elog " For the proctrack plugin:"
+ elog " freezer"
+ elog " For the task plugin:"
+ elog " cpuset, memory, devices"
+ elog " For the accounting plugin:"
+ elog " cpuacct, memory, blkio"
+ elog "Then, set these options in /etc/slurm/slurm.conf:"
+ elog " ProctrackType=proctrack/cgroup"
+ elog " TaskPlugin=task/cgroup"
+ einfo
+ ewarn "Paths were created for slurm. Please use these paths in /etc/slurm/slurm.conf:"
+ for folder_path in ${paths[@]}; do
+ ewarn " ${folder_path}"
+ done
+}