diff options
Diffstat (limited to 'sci-biology/poa/files/poa-2-respect-flags.patch')
-rw-r--r-- | sci-biology/poa/files/poa-2-respect-flags.patch | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/sci-biology/poa/files/poa-2-respect-flags.patch b/sci-biology/poa/files/poa-2-respect-flags.patch new file mode 100644 index 000000000000..fb01f0b5f934 --- /dev/null +++ b/sci-biology/poa/files/poa-2-respect-flags.patch @@ -0,0 +1,38 @@ +--- a/Makefile ++++ b/Makefile +@@ -1,6 +1,3 @@ +- +-AR=ar rc +- + TARGETS=poa liblpo.a poa_doc libbflag.a + + # align_score.c CAN BE USED TO ADD CUSTOMIZED SCORING FUNCTIONS +@@ -26,9 +23,8 @@ + stringptr.o + + +-CC = gcc + #CFLAGS= -g -ansi-strict -W -Wall -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. +-CFLAGS= -g -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. ++CPPFLAGS+= -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. + # -I$(HOME)/lib/include + # -DREPORT_MAX_ALLOC + +@@ -37,14 +33,14 @@ + + liblpo.a: $(LIBOBJECTS) + rm -f $@ +- $(AR) $@ $(LIBOBJECTS) +- ranlib $@ ++ $(AR) rc $@ $(LIBOBJECTS) ++ $(RANLIB) $@ + + + + # NB: LIBRARY MUST FOLLOW OBJECTS OR LINK FAILS WITH UNRESOLVED REFERENCES!! + poa: $(OBJECTS) liblpo.a +- $(CC) -o $@ $(OBJECTS) -lm liblpo.a ++ $(CC) $(CFLAGS) $(LDFLAGS) -o $@ $(OBJECTS) -lm liblpo.a + + what: + @echo poa: partial-order based sequence alignment program |