diff options
Diffstat (limited to 'sci-biology/psipred/files/2.6.1-path.patch')
| -rw-r--r-- | sci-biology/psipred/files/2.6.1-path.patch | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/sci-biology/psipred/files/2.6.1-path.patch b/sci-biology/psipred/files/2.6.1-path.patch new file mode 100644 index 000000000000..9b8d6b9fecfa --- /dev/null +++ b/sci-biology/psipred/files/2.6.1-path.patch @@ -0,0 +1,34 @@ +--- runpsipred 2008-04-05 00:14:36.000000000 +0200 ++++ runpsipred.new 2009-04-09 12:40:46.376203036 +0200 +@@ -14,13 +14,13 @@ + set dbname = nr + + # Where the NCBI programs have been installed +-set ncbidir = /usr/local/bin ++set ncbidir = @GENTOO_PORTAGE_EPREFIX@/usr/bin + + # Where the PSIPRED V2 programs have been installed +-set execdir = ./bin ++set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin + + # Where the PSIPRED V2 data files have been installed +-set datadir = ./data ++set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data + + set basename = $1:r + set rootname = $basename:t +--- runpsipred_single 2008-04-05 00:14:38.000000000 +0200 ++++ runpsipred_single.new 2009-04-09 12:41:10.086067082 +0200 +@@ -10,10 +10,10 @@ + # NOTE: Script modified to be more cluster friendly (DTJ April 2008) + + # Where the PSIPRED V2 programs have been installed +-set execdir = ./bin ++set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin + + # Where the PSIPRED V2 data files have been installed +-set datadir = ./data ++set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data + + set basename = $1:r + set rootname = $basename:t |