diff options
Diffstat (limited to 'sci-biology/trnascan-se/files/trnascan-se-1.31-ldflags.patch')
| -rw-r--r-- | sci-biology/trnascan-se/files/trnascan-se-1.31-ldflags.patch | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/sci-biology/trnascan-se/files/trnascan-se-1.31-ldflags.patch b/sci-biology/trnascan-se/files/trnascan-se-1.31-ldflags.patch new file mode 100644 index 000000000000..f28b1e8f6bb0 --- /dev/null +++ b/sci-biology/trnascan-se/files/trnascan-se-1.31-ldflags.patch @@ -0,0 +1,26 @@ +diff --git a/Makefile b/Makefile +index 53e5c5b..a2d3feb 100644 +--- a/Makefile ++++ b/Makefile +@@ -109,17 +109,17 @@ MPOBJ = mpviterbi.o mp-dbviterbi.o + all: $(PROGS) tRNAscan-SE setpaths + + covels-SE: $(OBJ) scan_main.o +- $(CC) $(CFLAGS) $(RFLAGS) -o covels-SE scan_main.o $(OBJ) $(LIBS) ++ $(CC) $(CFLAGS) $(RFLAGS) $(LDFLAGS) -o covels-SE scan_main.o $(OBJ) $(LIBS) + + coves-SE: $(OBJ) score_main.o +- $(CC) $(CFLAGS) $(RFLAGS) -o coves-SE score_main.o $(OBJ) $(LIBS) ++ $(CC) $(CFLAGS) $(RFLAGS) $(LDFLAGS) -o coves-SE score_main.o $(OBJ) $(LIBS) + + eufindtRNA: $(SQUIDOBJ) pavesi.o eufind_main.o +- $(CC) $(CFLAGS) -o eufindtRNA eufind_main.o \ ++ $(CC) $(CFLAGS) $(LDFLAGS) -o eufindtRNA eufind_main.o \ + pavesi.o $(SQUIDOBJ) $(LIBS) + + trnascan-1.4: trnascan.o +- $(CC) $(CFLAGS) -DTSCANDIR=\"$(LIBDIR)\" -o trnascan-1.4 trnascan.c ++ $(CC) $(CFLAGS) -DTSCANDIR=\"$(LIBDIR)\" $(LDFLAGS) -o trnascan-1.4 trnascan.c + + tRNAscan-SE: + $(PERLDIR)/$(PERLBIN) checkversion.pl |