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* sci-libs/scikit-image: add github upstream metadataArthur Zamarin2021-10-141-0/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/libqalculate: add 3.21.0Jakov Smolić2021-10-142-0/+75
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/szip: drop 2.1-r2Jakov Smolić2021-10-142-31/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/szip: Revert "drop 2.1.1"Jakov Smolić2021-10-142-0/+31
| | | | | | | | * I've accidentaly removed version 2.1.1 instead of 2.1 This reverts commit 0ce003d9c0ff4b5d4670516b890e67b677a004a1. Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/szip: drop 2.1.1Jakov Smolić2021-10-132-31/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/szip: Stabilize 2.1.1 ppc64, #816195Sam James2021-10-131-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/superlu_mt: update EAPI 6 -> 8Marek Szuba2021-10-131-14/+14
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/superlu: update HOMEPAGEMarek Szuba2021-10-131-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/superlu_mt: update HOMEPAGE, SRC_URIMarek Szuba2021-10-131-2/+2
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/sundials: update HOMEPAGEMarek Szuba2021-10-131-1/+1
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/sundials: implement USE=int64Marek Szuba2021-10-132-2/+4
| | | | | | | | | | | | | | | | | | What it already does: * allows changing the index size from 64 (default) to 32 bits * if USE=superlumt is set makes sure the state of USE=int64 in sci-libs/superlu_mt is the same as here, so that the assumption about index-type compatibility made in sunlinsol_superlumt.h is correct * allows test_sunlinsol_superlumt_300_0_1_0 and test_sunlinsol_superlumt_300_1_1_0 to pass *if USE=-int64* What still needs work: * getting the two superlumt tests to pass for USE=int64 - they still fail with "COLAMD failed at line 58 in file get_perm_c.c" Bug: https://bugs.gentoo.org/817680 Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/openlibm: bump to 0.8.0Jakov Petrina2021-10-122-0/+34
| | | | | | | | | Bump package to new upstream version 0.8.0. Update EAPI to latest version (8) as well. Signed-off-by: Jakov Petrina <jakov.petrina@sartura.hr> Closes: https://github.com/gentoo/gentoo/pull/22563 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/avogadrolibs: apply (upstream) workaround for older hdf5lib APISam James2021-10-121-1/+6
| | | | | Bug: https://bugs.gentoo.org/810505 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/h5hut: add comment to ebuild on < hdf5 depSam James2021-10-121-0/+2
| | | | | Bug: https://bugs.gentoo.org/809221 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/h5hut: depend on older hdf5lib for nowSam James2021-10-121-2/+2
| | | | | | | Doesn't seem to build with newer versions. Bug: https://bugs.gentoo.org/809221 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/hdf5: workaround build failure with older hdf5 installedSam James2021-10-121-0/+4
| | | | | | | | Thanks to upstream for the helpful suggestion! Bug: https://github.com/HDFGroup/hdf5/issues/1027 Closes: https://bugs.gentoo.org/808633 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/qrupdate: keyword 1.1.2-r2 for ~riscvAlex Fan2021-10-121-1/+1
| | | | | Signed-off-by: Alex Fan <alexfanqi@yahoo.com> Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/cxsparse: keyword 3.2.0 for ~riscvAlex Fan2021-10-121-1/+1
| | | | | Signed-off-by: Alex Fan <alexfanqi@yahoo.com> Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/htslib: drop 1.10.2David Seifert2021-10-112-52/+0
| | | | | | | Bug: https://bugs.gentoo.org/799788 Signed-off-by: David Seifert <soap@gentoo.org> Closes: https://github.com/gentoo/gentoo/pull/22556 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/cln: keyword 1.3.6 for ~riscvAlex Fan2021-10-111-2/+2
| | | | | Signed-off-by: Alex Fan <alexfanqi@yahoo.com> Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/libcifpp: Keyword 1.1.1 x86, #811417Sam James2021-10-101-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/metis: remove unused patchMichael Mair-Keimberger2021-10-101-12/+0
| | | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Michael Mair-Keimberger <mmk@levelnine.at> Closes: https://github.com/gentoo/gentoo/pull/22547 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/liborigin: remove unused patchesMichael Mair-Keimberger2021-10-104-503/+0
| | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Michael Mair-Keimberger <mmk@levelnine.at> Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/cartopy: Fix wrong dependency positioningThomas Beierlein2021-10-101-1/+1
| | | | | | Closes: https://bugs.gentoo.org/817293 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/rocRAND: bump version to 4.3.0YiyangWu2021-10-113-0/+76
| | | | | | | | | Enable benchmark and test. Closes: https://github.com/gentoo/gentoo/pull/22113 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocSPARSE: fix pyyaml missing issue.YiyangWu2021-10-101-0/+138
| | | | | | | | Closes: https://bugs.gentoo.org/810718 Closes: https://github.com/gentoo/gentoo/pull/22517 Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/armadillo: Version bump 10.7.1Andreas K. Hüttel2021-10-102-0/+151
| | | | | | Closes: https://bugs.gentoo.org/784869 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/cartopy: Version bumpThomas Beierlein2021-10-092-0/+70
| | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/szip: Stabilize 2.1.1 arm, #816195Sam James2021-10-071-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/djbfft: Fix tc-directlyJakov Smolić2021-10-072-0/+24
| | | | | | | Closes: https://bugs.gentoo.org/731874 Closes: https://bugs.gentoo.org/725432 Closes: https://bugs.gentoo.org/721352 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/sundials: remove unused patchesMichael Mair-Keimberger2021-10-062-26/+0
| | | | | | | Package-Manager: Portage-3.0.26, Repoman-3.0.3 Signed-off-by: Michael Mair-Keimberger <mmk@levelnine.at> Closes: https://github.com/gentoo/gentoo/pull/22500 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/pastix: remove unused patchesMichael Mair-Keimberger2021-10-062-62/+0
| | | | | | Package-Manager: Portage-3.0.26, Repoman-3.0.3 Signed-off-by: Michael Mair-Keimberger <mmk@levelnine.at> Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/camd: drop 2.4.6Jakov Smolić2021-10-061-31/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/ginkgo: drop 1.1.1-r1, 1.4.0Jakov Smolić2021-10-064-129/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/ginkgo: Remove broken live ebuildJakov Smolić2021-10-061-59/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/ginkgo: Port to EAPI-8 and cmake.eclassJakov Smolić2021-10-061-0/+55
| | | | | Closes: https://bugs.gentoo.org/811957 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/io_lib: drop 1.14.14Jakov Smolić2021-10-062-38/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/liborigin: drop 3.0.0Jakov Smolić2021-10-062-56/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/libint: drop 2.6.0-r3Jakov Smolić2021-10-061-63/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/libsvm: drop 3.24Jakov Smolić2021-10-062-119/+0
| | | | | Closes: https://bugs.gentoo.org/794625 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/openblas: drop 0.3.12-r1, 0.3.13, 0.3.14Jakov Smolić2021-10-064-597/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/amd: drop 2.4.6Jakov Smolić2021-10-061-35/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/djbfft: drop 0.76-r2Jakov Smolić2021-10-061-67/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/klu: drop 1.3.9Jakov Smolić2021-10-061-27/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/metis: drop 5.1.0-r4Jakov Smolić2021-10-061-64/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/qd: drop 2.3.22Jakov Smolić2021-10-063-229/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/qrupdate: drop 1.1.2-r1Jakov Smolić2021-10-061-50/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/amd: amd64 stable wrt bug #816234Agostino Sarubbo2021-10-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/djbfft: amd64 stable wrt bug #816231Agostino Sarubbo2021-10-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/klu: amd64 stable wrt bug #816228Agostino Sarubbo2021-10-061-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>