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* sci-libs/gdal: fix build with enabled python use flagConrad Kostecki2019-07-152-0/+436
| | | | | | | | Closes: https://bugs.gentoo.org/689110 Package-Manager: Portage-2.3.68, Repoman-2.3.16 Signed-off-by: Conrad Kostecki <conrad@kostecki.com> Closes: https://github.com/gentoo/gentoo/pull/12441 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/blis: fix unmatched keywords and maintainer type.Mo Zhou2019-07-113-9/+9
| | | | | | | Closes: https://github.com/gentoo/gentoo/pull/12420 Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/openblas: bump to 0.3.6, solving problem with gcc-9.1.0 .Mo Zhou2019-07-112-0/+106
| | | | | | | | Closes: https://github.com/gentoo/gentoo/pull/12423 Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/openblas: add the missing postinst steps and maintainer.Mo Zhou2019-07-112-10/+34
| | | | | | | | Closes: https://github.com/gentoo/gentoo/pull/12422 Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/mkl-rt: Intel MKL runtime libraries with eselect-ldso mechanism.Mo Zhou2019-07-093-0/+107
| | | | | | | | Closes: https://bugs.gentoo.org/672466 Closes: https://github.com/gentoo/gentoo/pull/12405 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/openblas: new package with eselect-ldso feature integrated.Mo Zhou2019-07-064-0/+243
| | | | | | | | Closes: https://bugs.gentoo.org/584534 Closes: https://bugs.gentoo.org/658034 Closes: https://github.com/gentoo/gentoo/pull/12357 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/geos: Bump to 3.7.2Aaron W. Swenson2019-07-052-0/+62
| | | | | Package-Manager: Portage-2.3.66, Repoman-2.3.11 Signed-off-by: Aaron W. Swenson <titanofold@gentoo.org>
* sci-libs/matio: remove oldTim Harder2019-07-035-160/+0
| | | | Signed-off-by: Tim Harder <radhermit@gentoo.org>
* sci-libs/matio: version bump to 1.5.16Tim Harder2019-07-032-0/+47
| | | | Signed-off-by: Tim Harder <radhermit@gentoo.org>
* sci-libs/blis: bump to 0.6.0, getting rid of a patch.Mo Zhou2019-07-034-0/+133
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/12358 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/libqalculate: Bump subslotMatthias Maier2019-07-031-1/+1
| | | | | Package-Manager: Portage-2.3.68, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/libqalculate: alpha stable wrt bug #689020Agostino Sarubbo2019-07-031-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="alpha"
* sci-libs/libqalculate: x86 stable wrt bug #689020Agostino Sarubbo2019-07-021-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="x86"
* sci-libs/libqalculate: amd64 stable wrt bug #689020Agostino Sarubbo2019-07-021-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="amd64"
* sci-libs/libgeotiff: stable 1.4.1-r1 for ppc64, bug #688806Sergei Trofimovich2019-07-021-1/+1
| | | | | | Package-Manager: Portage-2.3.68, Repoman-2.3.16 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/libqalculate: stable 2.8.1 for ppc, bug #689020Sergei Trofimovich2019-07-021-2/+2
| | | | | | Package-Manager: Portage-2.3.68, Repoman-2.3.16 RepoMan-Options: --include-arches="ppc" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/libgeotiff: stable 1.4.1-r1 for ppc, bug #688806Sergei Trofimovich2019-07-021-1/+1
| | | | | | Package-Manager: Portage-2.3.68, Repoman-2.3.16 RepoMan-Options: --include-arches="ppc" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/libqalculate: version bump to 3.2.0Matthias Maier2019-06-302-0/+65
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.16 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/libgeotiff: x86 stable wrt bug #688806Agostino Sarubbo2019-06-281-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="x86"
* sci-libs/libgeotiff: amd64 stable wrt bug #688806Agostino Sarubbo2019-06-281-2/+2
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="amd64"
* sci-libs/gsl: strip the cblas provider role.Benda Xu2019-06-271-0/+58
| | | | | | | | | | | | | Computationally sci-libs/gsl as a cblas provider has no significant advantage over the reference implementation. Providing sci-libs/gsl as a general cblas provider introduces possibility circular dependency. sci-libs/gsl should rather be a cblas user than a provider. Closes: https://bugs.gentoo.org/688742 Package-Manager: Portage-2.3.52, Repoman-2.3.12 RepoMan-Options: --force Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/blis: new BLIS package as an BLAS/CBLAS alternative.Mo Zhou2019-06-268-0/+381
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/12322 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/lapack: add eselect-ldso USE flag.Benda Xu2019-06-262-8/+14
| | | | | | | | | profiles: mask eselect-ldso USE flags on fbsd and rpath ARCH. eselect-ldso USE depends on ld.so to do runtime library switching. Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/lapack: new ebuild for lapack that enables runtime switching.Mo Zhou2019-06-263-0/+117
| | | | | | | | | | This ebuild replaces {blas,cblas,lapack,lapacke}-reference ebuild files. Closes: https://github.com/gentoo/gentoo/pull/12319 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/dcmtk: [QA] Fix missing slot dep operatorsDavid Seifert2019-06-221-4/+4
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.15 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/dcmtk: Fix building against GCC 9David Seifert2019-06-222-1/+31
| | | | | | Closes: https://bugs.gentoo.org/686592 Package-Manager: Portage-2.3.67, Repoman-2.3.15 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/gsl: amd64 stable wrt bug #685692Mikle Kolyada2019-06-201-1/+1
| | | | | | Signed-off-by: Mikle Kolyada <zlogene@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="amd64"
* sci-libs/tensorflow: bump 1.14.0Jason Zaman2019-06-193-4/+10
| | | | | Signed-off-by: Jason Zaman <perfinion@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11
* sci-libs/tensorflow-estimator: bump 1.14.0_rc1Jason Zaman2019-06-192-1/+1
| | | | | Signed-off-by: Jason Zaman <perfinion@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11
* sci-libs/hdf5: Drop 1.8.18 and 1.10.1Andreas Sturmlechner2019-06-155-255/+1
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.14 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/libmed: fix hdf5 dependency versionBernd Waibel2019-06-151-1/+1
| | | | | | | | | | | Needs at least hdf5-1.10.2 as noted in configure.ac. Reported-by: Brian G. <gissf1@yahoo.com> Closes: https://bugs.gentoo.org/688078 Package-Manager: Portage-2.3.67, Repoman-2.3.14 Signed-off-by: Bernd Waibel <waebbl@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/12255 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/gdal: Drop 2.4.0Andreas Sturmlechner2019-06-124-417/+0
| | | | | | | Broken by current stable poppler. Package-Manager: Portage-2.3.67, Repoman-2.3.14 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/lmfit: amd64 stable wrt bug #687240Mikle Kolyada2019-06-091-1/+1
| | | | | | Signed-off-by: Mikle Kolyada <zlogene@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="amd64"
* sci-libs/hdf5: sparc stable wrt bug #678264Agostino Sarubbo2019-06-081-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="sparc"
* sci-libs/libcerf: alpha stable wrt bug #685690Agostino Sarubbo2019-06-061-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="alpha"
* sci-libs/hdf5: ppc stable wrt bug #678264Agostino Sarubbo2019-06-051-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="ppc"
* sci-libs/libcerf: s390 stable wrt bug #685690Agostino Sarubbo2019-06-041-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.62, Repoman-2.3.11 RepoMan-Options: --include-arches="s390"
* sci-libs/tensorflow-estimator: bump 1.14.0_rc0Jason Zaman2019-06-052-0/+59
| | | | | Signed-off-by: Jason Zaman <perfinion@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11
* sci-libs/tensorflow: bump 1.14.0_rc0Jason Zaman2019-06-054-1/+405
| | | | | Signed-off-by: Jason Zaman <perfinion@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11
* sci-libs/lmfit: x86 stable (bug #687240)Thomas Deutschmann2019-06-041-1/+1
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.14 Signed-off-by: Thomas Deutschmann <whissi@gentoo.org>
* sci-libs/hdf5: ppc64 stable wrt bug #678264Agostino Sarubbo2019-06-041-1/+1
| | | | | | Signed-off-by: Agostino Sarubbo <ago@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11 RepoMan-Options: --include-arches="ppc64"
* sci-libs/hdf5-1.10.5-r0: alpha stableTobias Klausmann2019-06-041-1/+1
| | | | | Bug: http://bugs.gentoo.org/678264 Signed-off-by: Tobias Klausmann <klausman@gentoo.org>
* sci-libs/libcerf: stable 1.5 for ppc64, bug #685690Sergei Trofimovich2019-05-301-1/+1
| | | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/libcerf: stable 1.5 for ppc, bug #685690Sergei Trofimovich2019-05-301-1/+1
| | | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 RepoMan-Options: --include-arches="ppc" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/libcerf: stable 1.5 for ia64, bug #685690Sergei Trofimovich2019-05-301-1/+1
| | | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 RepoMan-Options: --include-arches="ia64" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/libcerf: stable 1.5 for hppa, bug #685690Sergei Trofimovich2019-05-301-1/+1
| | | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 RepoMan-Options: --include-arches="hppa" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/linux-gpib: amd64 stableAndreas K. Huettel2019-05-281-2/+2
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib-modules: amd64 stableAndreas K. Huettel2019-05-281-2/+2
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib-modules: drop oldAndreas K. Huettel2019-05-282-86/+0
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib: drop oldAndreas K. Huettel2019-05-282-171/+0
| | | | | Package-Manager: Portage-2.3.67, Repoman-2.3.13 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>