From e9cac45475fccd02e6d40c58fd876ca63b2e16f2 Mon Sep 17 00:00:00 2001
From: Justin Lecher <jlec@gentoo.org>
Date: Sat, 2 Apr 2016 12:09:36 +0200
Subject: sci-biology/rebase: Version Bump

Package-Manager: portage-2.2.27
Signed-off-by: Justin Lecher <jlec@gentoo.org>
---
 sci-biology/rebase/Manifest           |  1 +
 sci-biology/rebase/rebase-1604.ebuild | 46 +++++++++++++++++++++++++++++++++++
 2 files changed, 47 insertions(+)
 create mode 100644 sci-biology/rebase/rebase-1604.ebuild

(limited to 'sci-biology/rebase')

diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 3afe7ef9ac49..fdaa1dfa6881 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,2 +1,3 @@
 DIST rebase-1601.tar.xz 99890720 SHA256 de0f7dd6cf831c52434e7434491b9c738c41aab51c8f8d91b243569f25209eb8 SHA512 a6e3faf7fc2eaf475605ed72db7f1cfdc4ba8c280f1650f723c5a664090ed64e7ac014012042c466d65edea8b2767bbcb0f38c3d5b69dbdb35e89cf0685c92ad WHIRLPOOL f06338c0d6ef59d7ac792f6f7fc48338b73d659614c0694109152fd33606174be6741cb662478f38e37e9622118de27c3c30c537b741b49e218f64973fe2c783
 DIST rebase-1602.tar.xz 101007300 SHA256 26257dc10a6aba54024772956ae03e8530d4b2176db60dcc386427196a936d0b SHA512 7a00a11019124a835ef3d328c33cc4ab9d59665b3c929cf02a44bc09de8ca53185b939057705ee6ce79eeddc9ca9b8246582895b949dd38abe9066a380e3a2c9 WHIRLPOOL fac62146ab6ff09895cc9e4ece2b4869910c90c342051c5446085267585362adcc8a30af66a58d068d86c3eb6e7a37ceb32224a69114aa629a62a958fae09ed0
+DIST rebase-1604.tar.xz 102817536 SHA256 f234eadba5aa30573d664c9d9caab480ecbb383f0beab256e149296ee5d982ef SHA512 8ba6a24a8cf1b71a1ac2e0fb1634c0307d570af459fc940639046bd57362f3750e5f0390bcb7f3c7d2b924e1a5bf02825b5feb87a1f7d670d755f3b843df91a3 WHIRLPOOL 8ccaf435d7582fe1b86676037aaf7b0db742cd8d998a55d400f941a94e53731e1814028e1fed1be46f53bea702b570a1bffd73ba328ee06db17adcd731e3733c
diff --git a/sci-biology/rebase/rebase-1604.ebuild b/sci-biology/rebase/rebase-1604.ebuild
new file mode 100644
index 000000000000..9adb365ae5f1
--- /dev/null
+++ b/sci-biology/rebase/rebase-1604.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+	if use emboss; then
+		echo; einfo "Indexing Rebase for usage with EMBOSS."
+		mkdir REBASE || die
+		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+				-protofile proto.${MY_PV} -equivalences \
+				|| die "Indexing Rebase failed."
+		echo
+	fi
+}
+
+src_install() {
+	if ! use minimal; then
+		insinto /usr/share/${PN}
+		doins withrefm.${MY_PV} proto.${MY_PV}
+	fi
+	newdoc REBASE.DOC README
+	if use emboss; then
+		insinto /usr/share/EMBOSS/data/REBASE
+		doins REBASE/embossre.{enz,ref,sup}
+		insinto /usr/share/EMBOSS/data
+		doins REBASE/embossre.equ
+	fi
+}
-- 
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