From 9bb2017d31f4467386be5262aa036ecf5dabf97a Mon Sep 17 00:00:00 2001
From: Sam James <sam@gentoo.org>
Date: Tue, 15 Jun 2021 02:35:24 +0000
Subject: sci-biology/uchime: workaround failure with GCC 11

Force C++14 for now because we don't really want a large patch for
typedefs.

Closes: https://bugs.gentoo.org/786297
Signed-off-by: Sam James <sam@gentoo.org>
---
 sci-biology/uchime/uchime-4.2.40.ebuild | 11 +++++++++--
 1 file changed, 9 insertions(+), 2 deletions(-)

(limited to 'sci-biology')

diff --git a/sci-biology/uchime/uchime-4.2.40.ebuild b/sci-biology/uchime/uchime-4.2.40.ebuild
index 75827ab3a304..9b346f4fbc8d 100644
--- a/sci-biology/uchime/uchime-4.2.40.ebuild
+++ b/sci-biology/uchime/uchime-4.2.40.ebuild
@@ -4,7 +4,7 @@
 EAPI=7
 
 MY_P="${PN}${PV}_src"
-inherit cmake
+inherit cmake flag-o-matic
 
 DESCRIPTION="Fast, accurate chimera detection"
 HOMEPAGE="https://www.drive5.com/usearch/manual/uchime_algo.html"
@@ -13,7 +13,6 @@ SRC_URI="https://www.drive5.com/${PN}/${MY_P}.tar.gz"
 LICENSE="public-domain"
 SLOT="0"
 KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="debug"
 
 S="${WORKDIR}"/${MY_P}
 
@@ -21,3 +20,11 @@ src_prepare() {
 	cp "${FILESDIR}"/CMakeLists.txt . || die
 	cmake_src_prepare
 }
+
+src_configure() {
+	# "myutils.h: error: reference to byte is ambiguous""
+	# bug #786297
+	append-cppflags -std=c++14
+
+	cmake_src_configure
+}
-- 
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