http://code.google.com/p/bioapi-linux/issues/detail?id=4 --- a/addins/pwbsp/Makefile.in +++ b/addins/pwbsp/Makefile.in @@ -87,7 +87,7 @@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CFLAGS = @CFLAGS@ CPP = @CPP@ -CPPFLAGS = -I${top_srcdir}/include/ \ +AM_CPPFLAGS = -I${top_srcdir}/include/ \ -I${top_srcdir}/imports/cdsa/v2_0/inc/ CXX = @CXX@ @@ -111,7 +111,7 @@ INSTALL_DATA = @INSTALL_DATA@ INSTALL_SCRIPT = @INSTALL_SCRIPT@ INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@ LD = @LD@ -LDFLAGS = -Wl,--version-script=${srcdir}/libpwbsp.ver +AM_LDFLAGS = -Wl,--version-script=${srcdir}/libpwbsp.ver LEX = @LEX@ LEXLIB = @LEXLIB@ LEX_OUTPUT_ROOT = @LEX_OUTPUT_ROOT@ --- a/addins/qtpwbsp/Makefile.in +++ b/addins/qtpwbsp/Makefile.in @@ -96,7 +96,7 @@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CFLAGS = @CFLAGS@ CPP = @CPP@ -CPPFLAGS = -I${top_srcdir}/include \ +AM_CPPFLAGS = -I${top_srcdir}/include \ -I${top_srcdir}/imports/cdsa/v2_0/inc \ ${QT_CXXFLAGS} @@ -121,7 +121,7 @@ INSTALL_DATA = @INSTALL_DATA@ INSTALL_SCRIPT = @INSTALL_SCRIPT@ INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@ LD = @LD@ -LDFLAGS = -Wl,--version-script=${srcdir}/libqtpwbsp.ver \ +AM_LDFLAGS = -Wl,--version-script=${srcdir}/libqtpwbsp.ver \ ${QT_LIBS} LEX = @LEX@