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# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=4
inherit eutils
DESCRIPTION="Inference of RNA alignments"
HOMEPAGE="http://infernal.janelia.org/"
SRC_URI="ftp://selab.janelia.org/pub/software/${PN}/${P}.tar.gz"
LICENSE="GPL-3"
SLOT="0"
IUSE="mpi"
KEYWORDS="amd64 x86"
DEPEND="mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"
src_prepare() {
epatch \
"${FILESDIR}"/${P}-parallel-build.patch \
"${FILESDIR}"/${P}-overflows.patch \
"${FILESDIR}"/${P}-perl-5.16-2.patch \
"${FILESDIR}"/${P}-ldflags.patch
}
src_configure() {
econf \
--prefix="${D}/usr" \
$(use_enable mpi)
}
src_install() {
default
pushd documentation/manpages > /dev/null
for i in *;
do newman ${i} ${i/.man/.1}
done
popd > /dev/null
insinto /usr/share/${PN}
doins -r benchmarks tutorial intro matrices
dodoc 00README* Userguide.pdf documentation/release-notes/*
}
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