# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 # @ECLASS: R-packages.eclass # @AUTHOR: # Alessandro Barbieri # André Erdmann # Benda Xu # Denis Dupeyron # Robert Greener # @BLURB: eclass to build R packages # @MAINTAINER: # Alessandro Barbieri # @SUPPORTED_EAPIS: 7 8 case ${EAPI} in 7|8) ;; *) die "${ECLASS}: EAPI ${EAPI} unsupported." esac if [ ! ${_R_PACKAGES_ECLASS} ]; then inherit edo eutils optfeature toolchain-funcs # @ECLASS_VARIABLE: SUGGESTED_PACKAGES # @DEPRECATED: none # @DEFAULT_UNSET # @DESCRIPTION: # String variable containing the list of upstream suggested packages. Consider # using optfeature directly instead for more concise descriptions. # @ECLASS_VARIABLE: CRAN_SNAPSHOT_DATE # @DEFAULT_UNSET # @DESCRIPTION: # The date the ebuild was updated in YYYY-MM-DD format used to fetch distfiles # from Microsoft CRAN mirror. This will be required in the future. # @ECLASS_VARIABLE: CRAN_PN # @DESCRIPTION: # Package name to use for fetching distfiles from CRAN. : ${CRAN_PN:=${PN//_/.}} # @ECLASS_VARIABLE: CRAN_PV # @DESCRIPTION: # Package version to use for fetching distfiles from CRAN. : ${CRAN_PV:=${PV}} if [[ ${CRAN_SNAPSHOT_DATE} ]]; then SRC_URI="https://cran.microsoft.com/snapshot/${CRAN_SNAPSHOT_DATE}" else SRC_URI="mirror://cran" fi SRC_URI+="/src/contrib/${CRAN_PN}_${CRAN_PV}.tar.gz" HOMEPAGE="https://cran.r-project.org/package=${CRAN_PN}" SLOT="0" DEPEND="dev-lang/R" RDEPEND="${DEPEND}" # @FUNCTION: _movelink # @INTERNAL # @USAGE: # @DESCRIPTION: # will contain symlinks to everything in _movelink() { local source=${1} local dest=${2} if [[ -e "${source}" ]]; then local rp_source="$(realpath ${source} || die)" mv "${rp_source}" "${dest}" || die cp -rsf "${dest}" "${rp_source}" || die fi } # @FUNCTION: R-packages_src_unpack # @DEPRECATED: none # @DESCRIPTION: # Unpack R packages into the right folder. Consider setting ${S} to appropriate # value instead. R-packages_src_unpack() { default_src_unpack if [[ -d "${CRAN_PN}" ]] && [[ ! -d "${P}" ]]; then mv "${CRAN_PN}" "${P}" || die fi } # @FUNCTION: R-packages_src_prepare # @DEPRECATED: none # @DESCRIPTION: # Remove unwanted files from the sources. R-packages_src_prepare() { default_src_prepare eqawarn "This ebuild uses R-packages_src_prepare which is no-op." eqawarn "You can safely remove it." } # @FUNCTION: R-packages_src_configure # @DESCRIPTION: # Set up temporary directories. R-packages_src_configure() { mkdir "${T}"/R || die } # @FUNCTION: R-packages_src_compile # @DESCRIPTION: # Pass build-related environment variables to R and then build/install the # package. R-packages_src_compile() { local -a mymakeflags=( "${MAKEFLAGS}" AR="$(tc-getAR)" CC="$(tc-getCC)" CPP="$(tc-getCPP)" CXX="$(tc-getCXX)" FC="$(tc-getFC)" LD="$(tc-getLD)" NM="$(tc-getNM)" RANLIB="$(tc-getRANLIB)" CFLAGS="${CFLAGS}" CPPFLAGS="${CPPFLAGS}" CXXFLAGS="${CXXFLAGS}" FFLAGS="${FFLAGS}" FCFLAGS="${FCFLAGS}" LDFLAGS="${LDFLAGS}" MAKEOPTS="${MAKEOPTS}" ) MAKEFLAGS="${mymakeflags[@]// /\\ }" \ edo R CMD INSTALL . -d -l "${T}"/R --byte-compile } # @FUNCTION: R-packages_src_install # @DESCRIPTION: # Move files into right folders. # # Documentation and examples is moved to docdir, symlinked back to R # site-library (to allow access from within R). # # Everything else is moved to the R site-library. R-packages_src_install() { cd "${T}"/R/${CRAN_PN} || die local DOCDIR="/usr/share/doc/${PF}" local EDOCDIR="${ED}${DOCDIR}" mkdir -p "${EDOCDIR}" || die for i in {NEWS,README}.md DESCRIPTION CITATION INDEX NEWS WORDLIST News.Rd; do _movelink "${i}" "${EDOCDIR}/${i}" done if [[ -e html ]]; then _movelink html "${EDOCDIR}"/html fi if [[ -e examples ]]; then _movelink examples "${EDOCDIR}"/examples docompress -x "${DOCDIR}"/examples fi if [[ -e doc ]]; then pushd doc || die for i in *; do _movelink "${i}" "${EDOCDIR}/${i}" done popd || die fi rm -f LICENSE || die rm -rf tests test || die insinto /usr/$(get_libdir)/R/site-library doins -r "${T}"/R/${CRAN_PN} } # @FUNCTION: R-packages_pkg_postinst # @DEPRECATED: optfeature # @DESCRIPTION: # Prompt to install the upstream suggested packages (if they exist). Consider # calling "optfeature" directly instead for concise descriptions. R-packages_pkg_postinst() { for p in ${SUGGESTED_PACKAGES}; do optfeature "having the upstream suggested package" "${p}" done } _R_PACKAGES_ECLASS=1 fi EXPORT_FUNCTIONS src_unpack src_configure src_compile src_install pkg_postinst