diff options
| -rw-r--r-- | sci-biology/express/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/express/express-0.9.5-r1.ebuild | 35 |
2 files changed, 0 insertions, 36 deletions
diff --git a/sci-biology/express/Manifest b/sci-biology/express/Manifest index 2e05adafed7a..9c2cc4ebf499 100644 --- a/sci-biology/express/Manifest +++ b/sci-biology/express/Manifest @@ -1,2 +1 @@ -DIST express-0.9.5-src.tgz 766024 BLAKE2B 3818bc9de30a5201d587d3e18feee85f3014b68672eaef32ce0fa5989e0ce2cd7ee8bb8c617db0cde2d061db0f31ba76c49aa03f66be92c40826a6ede35ebca9 SHA512 3a7360ffbe57f4f712b6db38d551d31384d995050a86238d79299edb12f0e7f5dca6f362b7858b5051ea2879af2b3559f78f9780d75ef2ef6fdad7398f781403 DIST express-1.5.1-src.tgz 931166 BLAKE2B 5eb185e4b001f26f0dd32885b256b9fa48c89f546d67d7f8472cade69dde25375a5fc8efed5f01b615d63b641b674f7034a13f9483eb7967a6fd784a55c8878e SHA512 59cf6511a879311247c65334285ea056d571d4fd950aa6243041fa10075ff0d1ddd2afbcfe12e5f7f3e7cdd22fe37fd7f6b43ed4a8eb28d7a33d72366dc549ee diff --git a/sci-biology/express/express-0.9.5-r1.ebuild b/sci-biology/express/express-0.9.5-r1.ebuild deleted file mode 100644 index 945398a17a8f..000000000000 --- a/sci-biology/express/express-0.9.5-r1.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit cmake-utils - -DESCRIPTION="Streaming RNA-Seq Analysis" -HOMEPAGE="http://bio.math.berkeley.edu/eXpress/" -SRC_URI="http://bio.math.berkeley.edu/eXpress/downloads/express-${PV}/express-${PV}-src.tgz" - -LICENSE="Artistic" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -DEPEND=" - >=dev-libs/boost-1.52.0:= - sys-libs/zlib - sci-biology/bamtools" -RDEPEND="${DEPEND}" - -S="${WORKDIR}/${P}-src" - -CMAKE_USE_DIR="${S}/src" - -src_prepare() { - sed \ - -e 's|"${CMAKE_CURRENT_SOURCE_DIR}/../bamtools/lib/libbamtools.a"|bamtools|' \ - -e '1 a find_package(Boost 1.52 COMPONENTS filesystem program_options system thread)' \ - -e '1 a find_package(ZLIB)' \ - -e '/add_executable/ a include_directories("/usr/include/bamtools")' \ - -i src/CMakeLists.txt || die - - cmake-utils_src_prepare -} |