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Diffstat (limited to 'sci-biology/sibsim4/sibsim4-0.20.ebuild')
-rw-r--r--sci-biology/sibsim4/sibsim4-0.20.ebuild36
1 files changed, 36 insertions, 0 deletions
diff --git a/sci-biology/sibsim4/sibsim4-0.20.ebuild b/sci-biology/sibsim4/sibsim4-0.20.ebuild
new file mode 100644
index 000000000000..ecef6870dea4
--- /dev/null
+++ b/sci-biology/sibsim4/sibsim4-0.20.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+inherit toolchain-funcs
+
+DESCRIPTION="A rewrite and improvement upon sim4, a DNA-mRNA aligner"
+HOMEPAGE="http://sibsim4.sourceforge.net/"
+SRC_URI="mirror://sourceforge/${PN}/SIBsim4-${PV}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="amd64 x86"
+
+DEPEND=""
+RDEPEND=""
+
+S="${WORKDIR}/SIBsim4-${PV}"
+
+src_prepare() {
+ sed \
+ -e 's/CFLAGS = /CFLAGS +=/' \
+ -e '/^CC/s:=:?=:' \
+ -e '/^OPT/d' \
+ -e "s:-o:${LDFLAGS} -o:g" \
+ -i "${S}/Makefile" || die
+ tc-export CC
+}
+
+src_install() {
+ dobin SIBsim4
+ doman SIBsim4.1
+}