summaryrefslogtreecommitdiff
Commit message (Expand)AuthorAgeFilesLines
* sci-biology/emboss: Fix C99 `bool` clashDavid Seifert3 hours6-562/+10
* sci-biology/bowtie: fix QA issuesDavid Seifert4 hours2-13/+8
* sci-biology/bowtie: drop 2.2.9David Seifert5 hours3-91/+0
* sci-biology/bowtie: add 2.4.4David Seifert5 hours2-0/+56
* sci-biology/mosaik: Fix GCC 11 buildDavid Seifert7 days2-4/+64
* sci-biology/abyss: drop haskell@ from maintainersSergei Trofimovich8 days1-4/+0
* sci-biology/foldingathome: drop old versionConrad Kostecki2021-07-181-140/+0
* sci-biology/foldingathome: migrate to GLEP 81Conrad Kostecki2021-07-181-0/+138
* sci-biology/samtools: Add sys-libs/ncurses[unicode(+)]David Seifert2021-07-171-2/+2
* sci-biology/bcftools: PYTHON_MULTI_USEDEP -> PYTHON_USEDEPDavid Seifert2021-07-171-3/+3
* sci-biology/bamtools: drop 2.5.1David Seifert2021-06-202-34/+0
* sci-biology/bamtools: add 2.5.2David Seifert2021-06-202-0/+34
* sci-biology/plink: include DEPEND in RDEPENDSam James2021-06-181-4/+6
* sci-biology/ncbi-tools: add pkgconfig or pkgconfig-referenced libs depsSam James2021-06-181-0/+2
* sci-biology/mira: Depend on dev-libs/boost:=[threads(+)]David Seifert2021-06-181-1/+1
* sci-biology/uchime: workaround failure with GCC 11Sam James2021-06-151-2/+9
* sci-biology/ucsc-genome-browser: fix VariableScope ((E)ROOT)Sam James2021-06-111-4/+6
* sci-biology/amap: Support newer javaPacho Ramos2021-06-061-4/+4
* sci-biology/GBrowse: fix BadDefaultUseFlagsSam James2021-06-031-2/+2
* sci-biology/bioperl-run: fix BadDefaultUseFlagsSam James2021-06-031-2/+2
* sci-biology/embassy-mse: ncurses isn't optionalDavid Seifert2021-05-162-10/+10
* sci-biology/samtools: add missing multilib inherit for get_libnameSam James2021-05-131-2/+2
* sci-biology/treeviewx: Respect ARDavid Seifert2021-05-092-0/+11
* sci-biology/kallisto: Remove live ebuildDavid Seifert2021-05-081-25/+0
* sci-biology/kallisto: Remove old 0.43.1David Seifert2021-05-082-26/+0
* sci-biology/kallisto: Bump to 0.46.2David Seifert2021-05-086-0/+325
* sci-biology/gatk: Remove last-rited pkgJakov Smolic2021-05-043-44/+0
* sci-biology/diya: Remove last-rited pkgJakov Smolic2021-05-043-54/+0
* sci-biology/stride: Re-host distfilesPacho Ramos2021-05-021-1/+1
* sci-biology/wise: eutils->epatchSam James2021-04-181-2/+2
* sci-biology/velvet: eutils--Sam James2021-04-181-2/+2
* sci-biology/rmblast: eutils->epatchSam James2021-04-181-2/+2
* sci-biology/psipred: eutils->epatchSam James2021-04-181-2/+2
* sci-biology/plink: eutils--Sam James2021-04-181-2/+2
* sci-biology/ncbi-tools: eutils->epatchSam James2021-04-181-1/+1
* sci-biology/mrbayes: eutils->epatchSam James2021-04-181-2/+2
* sci-biology/fasta: eutils->epatchSam James2021-04-181-1/+1
* sci-biology/mira: eutils--Sam James2021-04-161-1/+1
* sci-biology/ncbi-tools: add missing pkgconfig (B)DEPENDSam James2021-04-121-2/+5
* sci-biology/probcons: Port to EAPI 7David Seifert2021-04-051-13/+9
* sci-biology/mothur: Port to EAPI 7David Seifert2021-04-051-18/+17
* sci-biology/raxml: Port to EAPI 7David Seifert2021-04-052-17/+12
* sci-biology/sibsim4: Port to EAPI 7David Seifert2021-04-052-14/+31
* sci-biology/repeatmasker-libraries: Port to EAPI 7David Seifert2021-04-051-12/+7
* sci-biology/update-blastdb: Port to EAPI 7David Seifert2021-04-051-10/+5
* sci-biology/cutg: Port to EAPI 7David Seifert2021-04-051-20/+13
* sci-biology/glimmer: Port to EAPI 7David Seifert2021-04-052-22/+24
* sci-biology/glimmer: Remove old 3.02David Seifert2021-04-055-195/+0
* sci-biology/gatk: Port to EAPI 7David Seifert2021-04-051-11/+5
* sci-biology/treeviewx: Port to EAPI 7David Seifert2021-04-044-42/+31