--- bowtie-1.1.2/Makefile +++ bowtie-1.1.2/Makefile @@ -106,10 +106,7 @@ endif OTHER_CPPS = ccnt_lut.cpp ref_read.cpp alphabet.cpp shmem.cpp \ - edit.cpp ebwt.cpp -ifneq (1,$(WITH_TBB)) - OTHER_CPPS += tinythread.cpp -endif + edit.cpp ebwt.cpp tinythread.cpp SEARCH_CPPS = qual.cpp pat.cpp ebwt_search_util.cpp ref_aligner.cpp \ log.cpp hit_set.cpp refmap.cpp annot.cpp sam.cpp \