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diff -aruN PEAR.orig/Builder.php PEAR/Builder.php
--- PEAR.orig/Builder.php 2014-07-12 08:25:32.000000000 -0400
+++ PEAR/Builder.php 2015-01-16 13:43:14.927894013 -0500
@@ -340,6 +340,11 @@
}
// }}} end of interactive part
+ if (file_exists('aclocal.m4')) {
+ $this->_runCommand('rm aclocal.m4');
+ $this->_runCommand('autoreconf');
+ }
+
// FIXME make configurable
if (!$user=getenv('USER')) {
$user='defaultuser';
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