blob: 69bf14d9cb93770ed3d0069cfad82dcda6fbcb83 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
|
# Copyright 1999-2007 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20070919.ebuild,v 1.1 2007/10/21 04:34:16 je_fro Exp $
inherit toolchain-funcs multilib
DESCRIPTION="A graphical multiple sequence alignment editor"
HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
SRC_URI="mirror://gentoo/${P}.tar.bz2"
LICENSE="public-domain"
SLOT="0"
KEYWORDS="~x86 ~ppc ~amd64"
IUSE=""
DEPEND="x11-libs/fltk
media-libs/pdflib
sci-biology/muscle
sci-biology/clustalw"
# =media-libs/pdflib-6.0*
src_unpack() {
unpack ${A}
cd "${S}"
# Respect CXXFLAGS. Package uses CFLAGS as CXXFLAGS.
# Fix invocation of C++ compiler.
# Fix include and library paths.
sed -i \
-e '/^FLTK/d' \
-e '/^X11/d' \
-e 's:#HELP_NOT:HELP_NOT:' \
-e "s:bge\/mgouy\/seaview:usr/share/${PN}:" \
-e "s:^CXX.*:CXX = $(tc-getCXX):" \
-e 's:-I$(FLTK):-I/usr/include/fltk-1.1:' \
-e 's:-I$(X11)/include:-I/usr/include/X11R6:' \
-e "s:\(^CFLAGS .*\):\1 ${CXXFLAGS}:" \
-e "s:-L\$(FLTK)/lib:-L/usr/$(get_libdir)/fltk-1.1:" \
-e "s:-L\$(X11)/lib:-L/usr/$(get_libdir)/X11:" \
Makefile || die
}
src_install() {
dobin seaview seaview_align.sh
insinto "/usr/share/${PN}"
doins protein.mase seaview.help
}
|