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#deptype sys
# == geo ==
~sci-geosciences/gmt {
libgmt
gmt
}
~sci-geosciences/grass :: grass
# == math ==
~sci-mathematics/glpk {
glpk
GLPK library package (e.g.
}
~sci-mathematics/jags :: jags
sci-mathematics/jags :: jags (see http://mcmc-jags.sourceforge.net)
# lowest octave version in portage is 3.4
sci-mathematics/octave {
Octave (>= 3.2.4) and its development files
}
# lowest version in portage is 2.3.4-r1
sci-mathematics/pari {
PARI/GP >= 2.3.0 [strongly recommended for logkda()]
PARI/GP >= 2.3.0 [strongly recommended forlogkda()]
pari/gp
}
sci-mathematics/singular {
Singular (http://www.singular.uni-kl.de) for exactcalculation of the MFR for graphs without splitting edges (onlyfor Unix systems).
}
~sci-mathematics/yacas :: yacas
sci-mathematics/yacas {
yacas (= 1.0.63) # instructions on home page
yacas (>= 1.0.63) # instructions on home page
}
# == misc ==
# FIXME: correct?
~sci-misc/netlogo-bin :: NetLogo
# == physics ==
# lowest sci-physics/root version in portage is 5.32.03
sci-physics/root {
root_v5.32.01 <http://root.cern.ch> - See READMEfile for installation instructions.
}
# == visualization ==
~sci-visualization/ggobi :: ggobi
sci-biology/merlin :: MERLIN(www.sph.umich.edu/csg/abecasis/merlin) must be installed andpointed to in the PATH environment variable.
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